Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: spima-b5w5h5

Arthrospira maxima CS-328 Uncharacterized protein

Relationship
Family|Duf_1400
Block| X
Position in NCBI Life Tree|Arthrospira maxima CS-328
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Oscillatoriophycideae: N E > Oscillatoriales: N E > Microcoleaceae: N E > Arthrospira: N E > Arthrospira maxima: N E > Arthrospira maxima CS-328: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : ABYK01000035
1 UniProt : B5W5H5
1 UniProt : B5W5H5
1 Interpro : B5W5H5
1 Pfam : B5W5H5
1 PIRSF : B5W5H5
1 SUPERFAM : B5W5H5
Sequence
Graphical view for this peptide sequence: spima-b5w5h5
Colored MSA for Duf_1400 (raw)
MAVAGKWFSSVWQIFGVGLSSAILSAIASVSPAHSAEEMIISYGIANTSI
SIAELEKFVESGESTPLLFVYGYLLNIEDPEGLRRGLKSPFEASPWSIDR
FLNSPTGETILRRMGRVVNTGDGENGYMALKTAIAQASKRPEGLTIMGIL
QEFPDPQIRIDLDFSIDLINETTQVLFRDQTIIEQISQQRSAENSANRRP
QQRFTIPNPRTMGPYSWTEAEVVFFNPNRDRPSPLFLYLPENIDRPAPLI
IISHGLGSDPKTFSYLAEHLASHGFAVAIPEHIATSANRFEGFLQGFEEP
PNPSEFAARPTDISYLLDLLEQKSASDPFWRERLDLQNVGVVGQSFGGYT
VLALAGAKLNPQILSQYCPDLPNRRITLNLSIILQCRALEVALERQNFRD
PRIKAAIAINPFSSLVFGERGMAAINIPVAIVSGTNDYITPAIAEQIEPF
TWLTNSDNILVLFEGGTHFSFLQEEGGQLPIPPEIIGPDPNFAYPYLKAL
SLTFFNLHIRRELDNRNYLNDAYLNTIGSSLFQMTILEELTPEQLQRAFP
QP
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MAVAGKWFSSVWQIFGVGLSSAILSAIASVSPAHSAEEMIISYGIANTSI
SIAELEKFVESGESTPLLFVYGYLLNIEDPEGLRRGLKSPFEASPWSIDR
FLNSPTGETILRRMGRVVNTGDGENGYMALKTAIAQASKRPEGLTIMGIL
QEFPDPQIRIDLDFSIDLINETTQVLFRDQTIIEQISQQRSAENSANRRP
QQRFTIPNPRTMGPYSWTEAEVVFFNPNRDRPSPLFLYLPENIDRPAPLI
IISHGLGSDPKTFSYLAEHLASHGFAVAIPEHIATSANRFEGFLQGFEEP
PNPSEFAARPTDISYLLDLLEQKSASDPFWRERLDLQNVGVVGQSFGGYT
VLALAGAKLNPQILSQYCPDLPNRRITLNLSIILQCRALEVALERQNFRD
PRIKAAIAINPFSSLVFGERGMAAINIPVAIVSGTNDYITPAIAEQIEPF
TWLTNSDNILVLFEGGTHFSFLQEEGGQLPIPPEIIGPDPNFAYPYLKAL
SLTFFNLHIRRELDNRNYLNDAYLNTIGSSLFQMTILEELTPEQLQRAFP
QP


Reference
    Title: Contribution of a sodium ion gradient to energy conservation during fermentation in the cyanobacterium Arthrospira (Spirulina) maxima CS-328
    Carrieri D, Ananyev G, Lenz O, Bryant DA, Dismukes GC
    Ref: Applied Environmental Microbiology, 77:7185, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer