(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) > cellular organisms: NE > Bacteria: NE > Proteobacteria: NE > Gammaproteobacteria: NE > Xanthomonadales: NE > Xanthomonadaceae: NE > Xanthomonas: NE > Xanthomonas axonopodis: NE
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) Xanthomonas campestris pv. vesicatoria str. 85-10: N, E.
Xanthomonas campestris pv. viticola: N, E.
Xanthomonas axonopodis pv. phaseoli: N, E.
Xanthomonas campestris pv. phaseoli: N, E.
Xanthomonas phaseoli pv. phaseoli: N, E.
Xanthomonas axonopodis pv. citri str. 306: N, E.
Xanthomonas citri subsp. citri Aw12879: N, E.
Xanthomonas citri pv. citri: N, E.
Xanthomonas campestris pv. musacearum NCPPB 2005: N, E.
Xanthomonas perforans: N, E.
Xanthomonas perforans 91-118: N, E.
Xanthomonas vasicola pv. vasculorum NCPPB 895: N, E.
Xanthomonas vasicola: N, E.
Xanthomonas vasicola pv. vasculorum NCPPB 206: N, E.
Xanthomonas vasicola pv. vasculorum NCPPB 890: N, E.
Xanthomonas vasicola pv. vasculorum NCPPB 1326: N, E.
Xanthomonas vasicola pv. vasculorum NCPPB 1381: N, E.
Xanthomonas campestris pv. arecae: N, E.
Xanthomonas axonopodis pv. dieffenbachiae: N, E.
Xanthomonas phaseoli pv. dieffenbachiae: N, E.
Xanthomonas axonopodis pv. glycines str. 8ra: N, E.
Xanthomonas campestris pv. vesicatoria: N, E.
Xanthomonas euvesicatoria: N, E.
Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122: N, E.
Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535: N, E.
Xanthomonas axonopodis pv. citrumelo F1: N, E.
Xanthomonas axonopodis pv. punicae str. LMG 859: N, E.
Xanthomonas citri pv. mangiferaeindicae LMG 941: N, E.
Xanthomonas axonopodis pv. malvacearum str. GSPB2388: N, E.
Xanthomonas axonopodis Xac29-1: N, E.
Xanthomonas fuscans subsp. fuscans: N, E.
LegendThis sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRV VIWLAGAGNAATRQAQAESLRADGAMVAVVDTAHLYAVLRKAGGTCTFSV GDVENFSRYVQAFYHIPTYRLPLLVGDGEGAALAYAIAAQAKPHVLAGVL TDGLCPATVSNQAICQPGVRPGTNTLLPVPLQIPWVLAASQDKRCPAAAE EGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVALPPPPGGLADL PVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLD SLRYFWTERTPQGFADDLDRIARIYAQRWDRQRVVLIGFSQGADVLPAAI NKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP AGTTVCIYGQDDDDALCPSLPANVARRVALPGDHHFKGDYATLAKTIMDQ LHALSKP
The gram-negative plant-pathogenic bacterium Xanthomonas campestris pv. vesicatoria is the causative agent of bacterial spot disease in pepper and tomato plants, which leads to economically important yield losses. This pathosystem has become a well-established model for studying bacterial infection strategies. Here, we present the whole-genome sequence of the pepper-pathogenic Xanthomonas campestris pv. vesicatoria strain 85-10, which comprises a 5.17-Mb circular chromosome and four plasmids. The genome has a high G+C content (64.75%) and signatures of extensive genome plasticity. Whole-genome comparisons revealed a gene order similar to both Xanthomonas axonopodis pv. citri and Xanthomonas campestris pv. campestris and a structure completely different from Xanthomonas oryzae pv. oryzae. A total of 548 coding sequences (12.2%) are unique to X. campestris pv. vesicatoria. In addition to a type III secretion system, which is essential for pathogenicity, the genome of strain 85-10 encodes all other types of protein secretion systems described so far in gram-negative bacteria. Remarkably, one of the putative type IV secretion systems encoded on the largest plasmid is similar to the Icm/Dot systems of the human pathogens Legionella pneumophila and Coxiella burnetii. Comparisons with other completely sequenced plant pathogens predicted six novel type III effector proteins and several other virulence factors, including adhesins, cell wall-degrading enzymes, and extracellular polysaccharides.
The genus Xanthomonas is a diverse and economically important group of bacterial phytopathogens, belonging to the gamma-subdivision of the Proteobacteria. Xanthomonas axonopodis pv. citri (Xac) causes citrus canker, which affects most commercial citrus cultivars, resulting in significant losses worldwide. Symptoms include canker lesions, leading to abscission of fruit and leaves and general tree decline. Xanthomonas campestris pv. campestris (Xcc) causes black rot, which affects crucifers such as Brassica and Arabidopsis. Symptoms include marginal leaf chlorosis and darkening of vascular tissue, accompanied by extensive wilting and necrosis. Xanthomonas campestris pv. campestris is grown commercially to produce the exopolysaccharide xanthan gum, which is used as a viscosifying and stabilizing agent in many industries. Here we report and compare the complete genome sequences of Xac and Xcc. Their distinct disease phenotypes and host ranges belie a high degree of similarity at the genomic level. More than 80% of genes are shared, and gene order is conserved along most of their respective chromosomes. We identified several groups of strain-specific genes, and on the basis of these groups we propose mechanisms that may explain the differing host specificities and pathogenic processes.
Xanthomonas axonopodis, Xanthomonas campestris (Xanthomonas citri), Xanthomonas oryzae, Xanthomonas fuscans, Xanthomonas gardneri,Xanthomonas perforans, glutaryl-7-aca acylase