Lu_2021_Biorxiv__

Reference

Title : Deep learning redesign of PETase for practical PET degrading applications - Lu_2021_Biorxiv__
Author(s) : Lu H , Diaz DJ , Czarnecki NJ , Zhu C , Kim W , Shroff R , Acosta DJ , Alexander B , Cole H , Zhang YJ , Lynd N , Ellington AD , Alper HS
Ref : Biorxiv , : , 2021
Abstract :

Plastic waste poses an ecological challenge1. While current plastic waste management largely relies on unsustainable, energy-intensive, or even hazardous physicochemical and mechanical processes, enzymatic degradation offers a green and sustainable route for plastic waste recycling2. Poly(ethylene terephthalate) (PET) has been extensively used in packaging and for the manufacture of fabrics and single-used containers, accounting for 12% of global solid waste3. The practical application of PET hydrolases has been hampered by their lack of robustness and the requirement for high processing temperatures. Here, we use a structure-based, deep learning algorithm to engineer an extremely robust and highly active PET hydrolase. Our best resulting mutant (FAST-PETase: Functional, Active, Stable, and Tolerant PETase) exhibits superior PET-hydrolytic activity relative to both wild-type and engineered alternatives, (including a leaf-branch compost cutinase and its mutant4) and possesses enhanced thermostability and pH tolerance. We demonstrate that whole, untreated, post-consumer PET from 51 different plastic products can all be completely degraded by FAST-PETase within one week, and in as little as 24 hours at 50 C. Finally, we demonstrate two paths for closed-loop PET recycling and valorization. First, we re-synthesize virgin PET from the monomers recovered after enzymatic depolymerization. Second, we enable in situ microbially-enabled valorization using a Pseudomonas strain together with FAST-PETase to degrade PET and utilize the evolved monomers as a carbon source for growth and polyhydroxyalkanoate production. Collectively, our results demonstrate the substantial improvements enabled by deep learning and a viable route for enzymatic plastic recycling at the industrial scale.

PubMedSearch : Lu_2021_Biorxiv__
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Gene_locus related to this paper: idesa-peth

Related information

Gene_locus idesa-peth
Structure 7SH6

Citations formats

Lu H, Diaz DJ, Czarnecki NJ, Zhu C, Kim W, Shroff R, Acosta DJ, Alexander B, Cole H, Zhang YJ, Lynd N, Ellington AD, Alper HS (2021)
Deep learning redesign of PETase for practical PET degrading applications
Biorxiv :

Lu H, Diaz DJ, Czarnecki NJ, Zhu C, Kim W, Shroff R, Acosta DJ, Alexander B, Cole H, Zhang YJ, Lynd N, Ellington AD, Alper HS (2021)
Biorxiv :