Title : First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans) - Luo_2017_G3.(Bethesda)_7_3831 |
Author(s) : Luo R , Zimin A , Workman R , Fan Y , Pertea G , Grossman N , Wear MP , Jia B , Miller H , Casadevall A , Timp W , Zhang SX , Salzberg SL |
Ref : G3 (Bethesda) , 7 :3831 , 2017 |
Abstract :
Here we describe the sequencing and assembly of the pathogenic fungus Lomentospora prolificans using a combination of short, highly accurate Illumina reads and additional coverage in very long Oxford Nanopore reads. The resulting assembly is highly contiguous, containing a total of 37,627,092 bp with over 98% of the sequence in just 26 scaffolds. Annotation identified 8896 protein-coding genes. Pulsed-field gel analysis suggests that this organism contains at least 7 and possibly 11 chromosomes, the two longest of which have sizes corresponding closely to the sizes of the longest scaffolds, at 6.6 and 5.7 Mb. |
PubMedSearch : Luo_2017_G3.(Bethesda)_7_3831 |
PubMedID: 28963165 |
Gene_locus related to this paper: 9pezi-a0a2n3nij3 , 9pezi-a0a2n3mzq9 , 9pezi-a0a2n3n7y4 |
Gene_locus | 9pezi-a0a2n3nij3 9pezi-a0a2n3mzq9 9pezi-a0a2n3n7y4 |
Luo R, Zimin A, Workman R, Fan Y, Pertea G, Grossman N, Wear MP, Jia B, Miller H, Casadevall A, Timp W, Zhang SX, Salzberg SL (2017)
First Draft Genome Sequence of the Pathogenic Fungus Lomentospora prolificans (Formerly Scedosporium prolificans)
G3 (Bethesda)
7 :3831
Luo R, Zimin A, Workman R, Fan Y, Pertea G, Grossman N, Wear MP, Jia B, Miller H, Casadevall A, Timp W, Zhang SX, Salzberg SL (2017)
G3 (Bethesda)
7 :3831