Palenik_2003_Nature_424_1037

Reference

Title : The genome of a motile marine Synechococcus - Palenik_2003_Nature_424_1037
Author(s) : Palenik B , Brahamsha B , Larimer FW , Land M , Hauser L , Chain P , Lamerdin J , Regala W , Allen EE , McCarren J , Paulsen I , Dufresne A , Partensky F , Webb EA , Waterbury J
Ref : Nature , 424 :1037 , 2003
Abstract :

Marine unicellular cyanobacteria are responsible for an estimated 20-40% of chlorophyll biomass and carbon fixation in the oceans. Here we have sequenced and analysed the 2.4-megabase genome of Synechococcus sp. strain WH8102, revealing some of the ways that these organisms have adapted to their largely oligotrophic environment. WH8102 uses organic nitrogen and phosphorus sources and more sodium-dependent transporters than a model freshwater cyanobacterium. Furthermore, it seems to have adopted strategies for conserving limited iron stores by using nickel and cobalt in some enzymes, has reduced its regulatory machinery (consistent with the fact that the open ocean constitutes a far more constant and buffered environment than fresh water), and has evolved a unique type of swimming motility. The genome of WH8102 seems to have been greatly influenced by horizontal gene transfer, partially through phages. The genetic material contributed by horizontal gene transfer includes genes involved in the modification of the cell surface and in swimming motility. On the basis of its genome, WH8102 is more of a generalist than two related marine cyanobacteria.

PubMedSearch : Palenik_2003_Nature_424_1037
PubMedID: 12917641
Gene_locus related to this paper: synpx-q7u3b1 , synpx-q7u3f4 , synpx-q7u3l2 , synpx-q7u7h0 , synpx-q7u8c6 , synpx-q7u8i5 , synpx-q7u9d5 , synpx-q7u9k7 , synpx-q7u648 , synpx-q7u656 , synpx-q7ua09 , synsp-SYNW0105 , synsp-SYNW0159 , synsp-SYNW0681 , synsp-SYNW0940

Related information

Gene_locus synpx-q7u3b1    synpx-q7u3f4    synpx-q7u3l2    synpx-q7u7h0    synpx-q7u8c6    synpx-q7u8i5    synpx-q7u9d5    synpx-q7u9k7    synpx-q7u648    synpx-q7u656    synpx-q7ua09    synsp-SYNW0105    synsp-SYNW0159    synsp-SYNW0681    synsp-SYNW0940
Gene_locus_frgt synpx-q7u689

Citations formats

Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J, Paulsen I, Dufresne A, Partensky F, Webb EA, Waterbury J (2003)
The genome of a motile marine Synechococcus
Nature 424 :1037

Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE, McCarren J, Paulsen I, Dufresne A, Partensky F, Webb EA, Waterbury J (2003)
Nature 424 :1037