Reeve_2010_Stand.Genomic.Sci_2_347

Reference

Title : Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers - Reeve_2010_Stand.Genomic.Sci_2_347
Author(s) : Reeve W , O'Hara G , Chain P , Ardley J , Brau L , Nandesena K , Tiwari R , Copeland A , Nolan M , Han C , Brettin T , Land M , Ovchinikova G , Ivanova N , Mavromatis K , Markowitz V , Kyrpides N , Melino V , Denton M , Yates R , Howieson J
Ref : Stand Genomic Sci , 2 :347 , 2010
Abstract :

Rhizobium leguminosarum bv trifolii is a soil-inhabiting bacterium that has the capacity to be an effective nitrogen fixing microsymbiont of a diverse range of annual Trifolium (clover) species. Strain WSM1325 is an aerobic, motile, non-spore forming, Gram-negative rod isolated from root nodules collected in 1993 from the Greek Island of Serifos. WSM1325 is produced commercially in Australia as an inoculant for a broad range of annual clovers of Mediterranean origin due to its superior attributes of saprophytic competence, nitrogen fixation and acid-tolerance. Here we describe the basic features of this organism, together with the complete genome sequence, and annotation. This is the first completed genome sequence for a microsymbiont of annual clovers. We reveal that its genome size is 7,418,122 bp encoding 7,232 protein-coding genes and 61 RNA-only encoding genes. This multipartite genome contains 6 distinct replicons; a chromosome of size 4,767,043 bp and 5 plasmids of size 828,924 bp, 660,973 bp, 516,088 bp, 350,312 bp and 294,782 bp.

PubMedSearch : Reeve_2010_Stand.Genomic.Sci_2_347
PubMedID: 21304718
Gene_locus related to this paper: rhiec-q2k5l4 , rhiec-q2k7y0 , rhiec-q2k107 , rhiec-q2k741 , rhiec-q2kav5 , rhiec-q2ke86 , rhil3-q1m3b7 , rhil3-q1m3u0 , rhil3-q1m5k0 , rhil3-q1m6u8 , rhil3-q1m7i2 , rhil3-q1m7n3 , rhil3-q1m917 , rhil3-q1m919 , rhil3-q1mbv4 , rhil3-q1mc48 , rhil3-q1mdd8 , rhil3-q1mee4 , rhil3-q1mfb0 , rhil3-q1mfp5 , rhil3-q1mhz8 , rhil3-q1mig2 , rhil3-q1mj26 , rhil3-q1mkk8 , rhil3-q1mlj7 , rhil3-q1mm33 , rhils-c6as95 , rhils-c6avm8 , rhils-c6avn9 , rhils-c6aw01 , rhils-c6axl5 , rhils-c6ayn2 , rhils-c6b1w3 , rhils-c6b1w7 , rhils-c6b3f3 , rhils-c6b4c5 , rhils-c6b5g1 , rhils-c6b7c8 , rhils-c6b7j6 , rhils-c6b8d5 , rhils-c6b9d4 , rhils-c6b403 , rhils-c6b716 , rhilw-b5zrm4 , rhilw-b5zs97 , rhilw-b6a1y2 , rhils-c6b7m4 , rhils-c6ba59

Related information

Gene_locus rhiec-q2k5l4    rhiec-q2k7y0    rhiec-q2k107    rhiec-q2k741    rhiec-q2kav5    rhiec-q2ke86    rhil3-q1m3b7    rhil3-q1m3u0    rhil3-q1m5k0    rhil3-q1m6u8    rhil3-q1m7i2    rhil3-q1m7n3    rhil3-q1m917    rhil3-q1m919    rhil3-q1mbv4    rhil3-q1mc48    rhil3-q1mdd8    rhil3-q1mee4    rhil3-q1mfb0    rhil3-q1mfp5    rhil3-q1mhz8    rhil3-q1mig2    rhil3-q1mj26    rhil3-q1mkk8    rhil3-q1mlj7    rhil3-q1mm33    rhils-c6as95    rhils-c6avm8    rhils-c6avn9    rhils-c6aw01    rhils-c6axl5    rhils-c6ayn2    rhils-c6b1w3    rhils-c6b1w7    rhils-c6b3f3    rhils-c6b4c5    rhils-c6b5g1    rhils-c6b7c8    rhils-c6b7j6    rhils-c6b8d5    rhils-c6b9d4    rhils-c6b403    rhils-c6b716    rhilw-b5zrm4    rhilw-b5zs97    rhilw-b6a1y2    rhils-c6b7m4    rhils-c6ba59

Citations formats

Reeve W, O'Hara G, Chain P, Ardley J, Brau L, Nandesena K, Tiwari R, Copeland A, Nolan M, Han C, Brettin T, Land M, Ovchinikova G, Ivanova N, Mavromatis K, Markowitz V, Kyrpides N, Melino V, Denton M, Yates R, Howieson J (2010)
Complete genome sequence of Rhizobium leguminosarum bv. trifolii strain WSM1325, an effective microsymbiont of annual Mediterranean clovers
Stand Genomic Sci 2 :347

Reeve W, O'Hara G, Chain P, Ardley J, Brau L, Nandesena K, Tiwari R, Copeland A, Nolan M, Han C, Brettin T, Land M, Ovchinikova G, Ivanova N, Mavromatis K, Markowitz V, Kyrpides N, Melino V, Denton M, Yates R, Howieson J (2010)
Stand Genomic Sci 2 :347