5YP3

Name : Crystal structure of dipeptidyl peptidase IV (DPP IV) with Ile-Pro from Pseudoxanthomonas mexicana

Revelation date : 21-Feb-2018

Family : DPP4N_Peptidase_S9

Gene_locus : 9psed-q6f3i7

PDB file : ESTHER: header of PDB entry RCSB: Full entry

Comment
Roppongi, S., Suzuki, Y., Tateoka, C., Fuimoto, M., Morisawa, S., Iizuka, I., Nakamura, A., Honma, N., Shida, Y., Ogasawara, W., Tanaka, N., Sakamoto, Y., Nonaka, T.

Ligand : Inhibitor Ile-Pro Ligand in structure: Ligplot

References (2)

Title : Crystal structures of a bacterial dipeptidyl peptidase IV reveal a novel substrate recognition mechanism distinct from that of mammalian orthologues - Roppongi_2018_Sci.Rep_8_2714
Author(s) : Roppongi S , Suzuki Y , Tateoka C , Fujimoto M , Morisawa S , Iizuka I , Nakamura A , Honma N , Shida Y , Ogasawara W , Tanaka N , Sakamoto Y , Nonaka T
Ref : Sci Rep , 8 :2714 , 2018
Abstract :
PubMedSearch : Roppongi_2018_Sci.Rep_8_2714
PubMedID: 29426867
Gene_locus related to this paper: 9psed-q6f3i7

Title : Periplasmic form of dipeptidyl aminopeptidase IV from Pseudoxanthomonas mexicana WO24: purification, kinetic characterization, crystallization and X-ray crystallographic analysis - Roppongi_2017_Acta.Crystallogr.F.Struct.Biol.Commun_73_601
Author(s) : Roppongi S , Tateoka C , Fujimoto M , Iizuka I , Morisawa S , Nakamura A , Honma N , Suzuki Y , Shida Y , Ogasawara W , Tanaka N , Sakamoto Y , Nonaka T
Ref : Acta Crystallographica F Struct Biol Commun , 73 :601 , 2017
Abstract :
PubMedSearch : Roppongi_2017_Acta.Crystallogr.F.Struct.Biol.Commun_73_601
PubMedID: 29095153
Gene_locus related to this paper: 9psed-q6f3i7

Representative scheme of Prolylcarboxypeptidase structure and an image from PDBsum server

Databases

PDB-Sum : 5YP3 Previously Class, Architecture, Topology and Homologous superfamily - PDB-Sum server

FSSP : 5YP3 Fold classification based on Structure-Structure alignment of Proteins - FSSP server

SCOP : 5YP3 Structural Classification Of Protein - SCOP server

PROTEOPEDIA : 5YP3 3D, interactive encyclopedia of proteins - PROTEOPEDIA server