Gene_Locus Report

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Gene_locus Report for: 9bact-k1yi15

uncultured bacterium; Rikenellaceae bacterium. Uncharacterized protein

Comment
Other strains: Rikenellaceae bacterium; environmental samples uncultured bacterium


Relationship
Family|Peptidase_S37
Block| X
Position in NCBI Life Tree|uncultured bacterium
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > environmental samples: N E > uncultured bacterium: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AMFJ01033662
1 UniProt : K1YI15
2 UniProt : K1YI15, A0A359H3Y1
2 Interpro : K1YI15, A0A359H3Y1
2 Pfam : K1YI15, A0A359H3Y1
2 PIRSF : K1YI15, A0A359H3Y1
2 SUPERFAM : K1YI15, A0A359H3Y1
Sequence
Graphical view for this peptide sequence: 9bact-k1yi15
Colored MSA for Peptidase_S37 (raw)
MDHTSPGEFFNKVAHFRYLLGKSTVFSLILHDYLLSMKRTTNFKLSLYFI
AVLLFSALTCGSPAFALENQFSKEISSDSLKRRIEQLPNIRDVQRIENGQ
FKDKYVLYVEQPISHEDPSLGTFRQRVYVMHAGIDRPTVIVTEGYGASYA
SNPKYREEISKLFNTNIIFVEHRYFLESTPKPLNWNYLTAESSAFDLHNV
TMIFKEIYKKKWIATGISKGGQTALIYRAFFPNDVEITVPYVAPLCKSAE
DGRHEPFIANFAGTPEQRAKLLSFQMEVLNRRATLQPKFDSLCVAKNYEF
NLPTEQIYDYSVLEFPFAFWQWGSDSEKVPATTATDEEIFNYWMKISSPD
YFVKESTTTAFFVQAGRELGYYGYDTKPFKGLLKIKSAKGYLSALFLPDA
AKFKFESKLYRKLSKFVATTDSKMIFIYGEFDPWSAVKVDEPKSNNVVVV
VEPKGSHRSRISTLPEESRTKVVSLIERWLLE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MDHTSPGEFFNKVAHFRYLLGKSTVFSLILHDYLLSMKRTTNFKLSLYFI
AVLLFSALTCGSPAFALENQFSKEISSDSLKRRIEQLPNIRDVQRIENGQ
FKDKYVLYVEQPISHEDPSLGTFRQRVYVMHAGIDRPTVIVTEGYGASYA
SNPKYREEISKLFNTNIIFVEHRYFLESTPKPLNWNYLTAESSAFDLHNV
TMIFKEIYKKKWIATGISKGGQTALIYRAFFPNDVEITVPYVAPLCKSAE
DGRHEPFIANFAGTPEQRAKLLSFQMEVLNRRATLQPKFDSLCVAKNYEF
NLPTEQIYDYSVLEFPFAFWQWGSDSEKVPATTATDEEIFNYWMKISSPD
YFVKESTTTAFFVQAGRELGYYGYDTKPFKGLLKIKSAKGYLSALFLPDA
AKFKFESKLYRKLSKFVATTDSKMIFIYGEFDPWSAVKVDEPKSNNVVVV
VEPKGSHRSRISTLPEESRTKVVSLIERWLLE


Reference
    Title: Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla
    Wrighton KC, Thomas BC, Sharon I, Miller CS, Castelle CJ, VerBerkmoes NC, Wilkins MJ, Hettich RL, Lipton MS and Banfield JF <2 more author(s)>
    Ref: Science, 337:1661, 2012 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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