Gene_Locus Report

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Gene_locus Report for: 9bila-a0a085nb82

Trichuris suis (pig whipworm). Uncharacterized protein

Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Trichuris suis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Enoplea: N E > Dorylaimia: N E > Trichinellida: N E > Trichuridae: N E > Trichuris: N E > Trichuris suis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: 9bila-a0a085nb82
Colored MSA for Neuroligin (raw)
MRDFKLSSNVHRKYTILCLRHESPDHHRCRTATRCLCQQHLPPKEMNRAA
YLLLLFQLLLLDAPTADGSEGDTKIVQTSFGKLRGRVVHFRHLGLPSVEQ
YLGVPYGTAPTGSKRFMMPQTAAKWTNVIKDATDLPPACVQLWPRSIMQR
SRSEALKVVNERIHSQVKRLVAMLRDQHEDCLYMNLFVPARREPQTELMP
VLVIIHGDSYNWNSGTLYDGSILAAYGRLIVVTLNYRLGVFGFLSSGDPT
CKGNWALSDIVCALDVLRAMVSDFGGDPSMVTLLGWDTGAALVNLLMSSP
ISAPVDSRLFRRAILLGGSALSSWALVTSPSEYFYQLADGLGCQIYKQNH
FGQQTLLGVEDVLECIQTDSVENITRAAALLDLPTFLTNFGPVIDGIVVN
TDPAYNLENHGSLFQEIDLLVGATKHEAYDQLSTEHLQYGLDVKNRDAIY
RTFVRNMYSFHRTEIFNAIVNEYNDWYNPGQHPITVRDSVLEAISDALYL
APLTKVVRLHAQGKTPGGVHRTEDGAQRGKTFFYLFSHETSGNPRYGLKG
SIHAEDLPYILGYPLLNNQPPSIELNAFDFTFNKQERVISEVLMRYVANF
VKTGDPNEIRWDNVLTDEVKFLERFRKLYWPEFYTIAKESCMEIRDHPKV
DSFYRAHEIAFWNNFLPSLESTGRTESNPEHHLLPQHFMKNSYFGVVRPY
DVGKMPFPPPPLPPTPIPTELTTILQNQQPAQIKITPQKEASSGTQSSQE
TATNYSTILSVTIAVGCALLILNLLVFAGIYRQRERHRKGKPQENSAGLL
LQETSPYDMTATYGGLIPSGSGQYSGSGMTLPPASPVTTSVRDGEAYPYM
QLQQRSSVANAYASSGSQQMIVPPEEDATFGITMHQQPQAISPVCPRHGK
LATAAASQAPKTQLEEIQV
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MRDFKLSSNVHRKYTILCLRHESPDHHRCRTATRCLCQQHLPPKEMNRAA
YLLLLFQLLLLDAPTADGSEGDTKIVQTSFGKLRGRVVHFRHLGLPSVEQ
YLGVPYGTAPTGSKRFMMPQTAAKWTNVIKDATDLPPACVQLWPRSIMQR
SRSEALKVVNERIHSQVKRLVAMLRDQHEDCLYMNLFVPARREPQTELMP
VLVIIHGDSYNWNSGTLYDGSILAAYGRLIVVTLNYRLGVFGFLSSGDPT
CKGNWALSDIVCALDVLRAMVSDFGGDPSMVTLLGWDTGAALVNLLMSSP
ISAPVDSRLFRRAILLGGSALSSWALVTSPSEYFYQLADGLGCQIYKQNH
FGQQTLLGVEDVLECIQTDSVENITRAAALLDLPTFLTNFGPVIDGIVVN
TDPAYNLENHGSLFQEIDLLVGATKHEAYDQLSTEHLQYGLDVKNRDAIY
RTFVRNMYSFHRTEIFNAIVNEYNDWYNPGQHPITVRDSVLEAISDALYL
APLTKVVRLHAQGKTPGGVHRTEDGAQRGKTFFYLFSHETSGNPRYGLKG
SIHAEDLPYILGYPLLNNQPPSIELNAFDFTFNKQERVISEVLMRYVANF
VKTGDPNEIRWDNVLTDEVKFLERFRKLYWPEFYTIAKESCMEIRDHPKV
DSFYRAHEIAFWNNFLPSLESTGRTESNPEHHLLPQHFMKNSYFGVVRPY
DVGKMPFPPPPLPPTPIPTELTTILQNQQPAQIKITPQKEASSGTQSSQE
TATNYSTILSVTIAVGCALLILNLLVFAGIYRQRERHRKGKPQENSAGLL
LQETSPYDMTATYGGLIPSGSGQYSGSGMTLPPASPVTTSVRDGEAYPYM
QLQQRSSVANAYASSGSQQMIVPPEEDATFGITMHQQPQAISPVCPRHGK
LATAAASQAPKTQLEEIQV


Reference
    Title: Genome and transcriptome of the porcine whipworm Trichuris suis
    Jex AR, Nejsum P, Schwarz EM, Hu L, Young ND, Hall RS, Korhonen PK, Liao S, Thamsborg S and Gasser RB <7 more author(s)>
    Ref: Nat Genet, 46:701, 2014 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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