Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: 9bila-a0a085nui3

Trichuris suis (pig whipworm). Uncharacterized protein

Relationship
Family|ACHE
Block| C
Position in NCBI Life Tree|Trichuris suis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Enoplea: N E > Dorylaimia: N E > Trichinellida: N E > Trichuridae: N E > Trichuris: N E > Trichuris suis: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : KL363209, KL367474
1 UniProt : A0A085NUI3
1 UniProt : A0A085NUI3
1 Interpro : A0A085NUI3
1 Pfam : A0A085NUI3
1 PIRSF : A0A085NUI3
1 SUPERFAM : A0A085NUI3
Sequence
Graphical view for this peptide sequence: 9bila-a0a085nui3
Colored MSA for ACHE (raw)
MVRDVVTHLIAIIRCTLFLLCTINKLAATPVEVTTQLGVLKGKLESVAGR
QVASFLGVPFGEPTSGQYRFKPPRMVKPWKKPIEATTLAPSCYQSKDTTF
PGFRGAEMWNANTPLDENCLYLNMWVPWGVRNATVLVWLYGGGFWYGSPS
LDIYDGRALAAEGDVIVVNLNYRMGVFGFLFLDDPDVPGNMGLMDQQLGL
RWIQQNIAYFGGNPNRVCLFGESAGAASIVAHMIANDSRPLFHNGILQSG
SLDNPWAMETPEKALSKAEQFARSLKCDNGHVSSTIHCLMNKSANELNDA
LWNVNLSFLEFPFVIVSRDRGGFFNQDAFVSLHEGNYKKDVNLIVGLNEN
EGSFWTFYYLPRHFRIEHDSLLSKDAFMDCVEESLALYPTVVRRAAAFHY
LDQQCRNQPEYYRDAVNRLIGDYFFTCDSLWFAEQLLEARAAKVYVYHFK
HRASTNPWPAWAGVMHAYEIEFVFGLPLLYPGNYTPQEEEFSKEIIKYWT
TFATSGKPEVPKGTLSWPEYTLAKKQSFALKFRTKEVEQRIKEETCKTWR
SARKMEYLLYAAQYRAGATASVRTTIAYLMTTVSIMLPTFLRI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MVRDVVTHLIAIIRCTLFLLCTINKLAATPVEVTTQLGVLKGKLESVAGR
QVASFLGVPFGEPTSGQYRFKPPRMVKPWKKPIEATTLAPSCYQSKDTTF
PGFRGAEMWNANTPLDENCLYLNMWVPWGVRNATVLVWLYGGGFWYGSPS
LDIYDGRALAAEGDVIVVNLNYRMGVFGFLFLDDPDVPGNMGLMDQQLGL
RWIQQNIAYFGGNPNRVCLFGESAGAASIVAHMIANDSRPLFHNGILQSG
SLDNPWAMETPEKALSKAEQFARSLKCDNGHVSSTIHCLMNKSANELNDA
LWNVNLSFLEFPFVIVSRDRGGFFNQDAFVSLHEGNYKKDVNLIVGLNEN
EGSFWTFYYLPRHFRIEHDSLLSKDAFMDCVEESLALYPTVVRRAAAFHY
LDQQCRNQPEYYRDAVNRLIGDYFFTCDSLWFAEQLLEARAAKVYVYHFK
HRASTNPWPAWAGVMHAYEIEFVFGLPLLYPGNYTPQEEEFSKEIIKYWT
TFATSGKPEVPKGTLSWPEYTLAKKQSFALKFRTKEVEQRIKEETCKTWR
SARKMEYLLYAAQYRAGATASVRTTIAYLMTTVSIMLPTFLRI


Reference
    Title: Genome and transcriptome of the porcine whipworm Trichuris suis
    Jex AR, Nejsum P, Schwarz EM, Hu L, Young ND, Hall RS, Korhonen PK, Liao S, Thamsborg S and Gasser RB <7 more author(s)>
    Ref: Nat Genet, 46:701, 2014 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer