Gene_Locus Report

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Gene_locus Report for: calja-f6zpl6

Callithrix jacchus (White-tufted-ear marmoset) Uncharacterized protein

Relationship
Family|Carb_B_Chordata
Block| C
Position in NCBI Life Tree|Callithrix jacchus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Primates: N E > Haplorrhini: N E > Simiiformes: N E > Platyrrhini: N E > Cebidae: N E > Callitrichinae: N E > Callithrix [genus]: N E > Callithrix [subgenus]: N E > Callithrix jacchus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 4 more: ACFV01013743, ACFV01013744, ACFV01013745
1 UniProt : F6Z7R7
1 UniProt : F6Z7R7
1 Interpro : F6Z7R7
1 Pfam : F6Z7R7
1 PIRSF : F6Z7R7
1 SUPERFAM : F6Z7R7
Sequence
Graphical view for this peptide sequence: calja-f6zpl6
Colored MSA for Carb_B_Chordata (raw)
VTARSRSPARPALPSSQRTPPTPFPVQTPRLDEALIHGWTDPGQPLGEQQ
RVHRRRTETCTMRLDRLQAQLSAVACGLLLLLIQGQGQDSASPIRTTHTG
QVLGSLVHVKGADVGVHTFLGIPFAKPPVGPLRFAPPEPPESWSGVRDAT
THPAMCLQDLTTLDSEVMNQVNVTIPSISMSEDCLYLSIYTPAHTHEGSN
LPVMVWIHGGGLVFGMASMYDGSVLAAFEDVVVVTIQYRLGVLGFFSTGD
KHATGNWGYLDQVAALRWVRRNIAHFGGNPDCVTIFGESAGGTSVSSLVL
SPIAQGLFHRAIMQSGVAVLPGLIANSADVISTVVANLSACDQVDSEALV
GCLRGKSKEEILAINKPFKCMIPAVVDGVFLPRHPQELLASAEFQPIPSI
IGVNNDEFGWIIPSIMGIYNPQKEMNREALQAVLQKMLSLMMLPPTFVDL
LMEEYIGDSGDPQTLRAQFQEIMMDSLFVIPALQVAHFQRSQGPVYFYEF
QHQPSWVKNIRPPHVKADHADELPYVFGSLFWGNYGAFGARNELRRESPR
DWAKRNRRENPNSEGLPHWPLFDQEERYLQLTLQPAVGRALKAHKLQFWK
KALPGKIQELEEAGERHTEL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

VTARSRSPARPALPSSQRTPPTPFPVQTPRLDEALIHGWTDPGQPLGEQQ
RVHRRRTETCTMRLDRLQAQLSAVACGLLLLLIQGQGQDSASPIRTTHTG
QVLGSLVHVKGADVGVHTFLGIPFAKPPVGPLRFAPPEPPESWSGVRDAT
THPAMCLQDLTTLDSEVMNQVNVTIPSISMSEDCLYLSIYTPAHTHEGSN
LPVMVWIHGGGLVFGMASMYDGSVLAAFEDVVVVTIQYRLGVLGFFSTGD
KHATGNWGYLDQVAALRWVRRNIAHFGGNPDCVTIFGESAGGTSVSSLVL
SPIAQGLFHRAIMQSGVAVLPGLIANSADVISTVVANLSACDQVDSEALV
GCLRGKSKEEILAINKPFKCMIPAVVDGVFLPRHPQELLASAEFQPIPSI
IGVNNDEFGWIIPSIMGIYNPQKEMNREALQAVLQKMLSLMMLPPTFVDL
LMEEYIGDSGDPQTLRAQFQEIMMDSLFVIPALQVAHFQRSQGPVYFYEF
QHQPSWVKNIRPPHVKADHADELPYVFGSLFWGNYGAFGARNELRRESPR
DWAKRNRRENPNSEGLPHWPLFDQEERYLQLTLQPAVGRALKAHKLQFWK
KALPGKIQELEEAGERHTEL



No Reference

Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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