Gene_Locus Report

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Gene_locus Report for: calja-u3csl8

Callithrix jacchus (White-tufted-ear marmoset). N-formylkynurenine formamidase

Relationship
Family|Kynurenine-formamidase
Block| H
Position in NCBI Life Tree|Callithrix jacchus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Primates: N E > Haplorrhini: N E > Simiiformes: N E > Platyrrhini: N E > Cebidae: N E > Callitrichinae: N E > Callithrix [genus]: N E > Callithrix [subgenus]: N E > Callithrix jacchus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : GAMT01007920, GAMP01010476, GAMP01010475
2 UniProt : U3CSL8, U3FMM2
2 UniProt : U3CSL8, U3FMM2
2 Interpro : U3CSL8, U3FMM2
2 Pfam : U3CSL8, U3FMM2
2 PIRSF : U3CSL8, U3FMM2
2 SUPERFAM : U3CSL8, U3FMM2
Sequence
Graphical view for this peptide sequence: calja-u3csl8
Colored MSA for Kynurenine-formamidase (raw)
MEVSGVGVSGEAPWKKMSAEELEHQYLPRQWVVRLGAEEALRTYSQIGIE
ATRRAQATWKSLLHVPYGDGEGERVDIYFPNKVAEGALPFFLFFHGGYWQ
SGSKDQSAFMVDPLAAQGVAVVIVGYDIAPKGTLDQMVDQVTRSIVFVQK
RYPSNEGIYLCGHSAGAHLAAMMLLADWTKHGVTPNLKGFFLVSGVFDLE
PMVYTSQNVALQLTLEDARRNSPQLKVAQAQPADPACPVLVVVGQFDSPE
FHRQSWEFYQTLCQGGWKASFEKLSDVDHFEIIETLTQKDSVLTQIFLKT
IFQ
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MEVSGVGVSGEAPWKKMSAEELEHQYLPRQWVVRLGAEEALRTYSQIGIE
ATRRAQATWKSLLHVPYGDGEGERVDIYFPNKVAEGALPFFLFFHGGYWQ
SGSKDQSAFMVDPLAAQGVAVVIVGYDIAPKGTLDQMVDQVTRSIVFVQK
RYPSNEGIYLCGHSAGAHLAAMMLLADWTKHGVTPNLKGFFLVSGVFDLE
PMVYTSQNVALQLTLEDARRNSPQLKVAQAQPADPACPVLVVVGQFDSPE
FHRQSWEFYQTLCQGGWKASFEKLSDVDHFEIIETLTQKDSVLTQIFLKT
IFQ


Reference
    Title: De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences
    Maudhoo MD, Ren D, Gradnigo JS, Gibbs RM, Lubker AC, Moriyama EN, French JA, Norgren RB, Jr.
    Ref: Gigascience, 3:14, 2014 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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