Gene_Locus Report

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Gene_locus Report for: giala-ENC6

Giardia lamblia (Giardia intestinalis) (strain ATCC 50803 / WB clone C6) giardia lamblia (enc6)

Comment
Giardia lamblia ATCC 50803 glp_393_28177_26171 . only c-term Pfam Abhydrolase_1 352 658


Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Giardia lamblia
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Fornicata: N E > Diplomonadida: N E > Hexamitidae: N E > Giardiinae: N E > Giardia: N E > Giardia intestinalis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : U24239, AACB01000049, AACB02000028
2 UniProt : P92130, A8BNJ9
2 UniProt : P92130, A8BNJ9
2 Interpro : P92130, A8BNJ9
2 Pfam : P92130, A8BNJ9
2 PIRSF : P92130, A8BNJ9
2 SUPERFAM : P92130, A8BNJ9
Sequence
Graphical view for this peptide sequence: giala-ENC6
Colored MSA for 6_AlphaBeta_hydrolase (raw)
PRVLFLHGFDFDTTINAPFINALAMTHEVLTFDWPATGGSDGTPGDSYDI
DTLIRYCLEVLSLPVLNWIHGFEILDEPPGSPVQPPAELNPQDENNPSGP
SAAATATTVRYPVRTYKLINSTSSQQKITLVGHSSGGLMAAAMAPILKDI
VDKVVLLAPVGMVMELNRKLIFMRDHPILARITQPLMSVYPTLALKTFLD
CADRVKYLPEPLQANVKRKYESHVRSRCTSAIKQAINSSAAFPWTSGKEY
FTRLDDLDLETVLVLANDDAIIQCAKAKEQFEKYCPRINIVFRSVGGHDF
HLVYPVETLKLCGLQSI
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

PRVLFLHGFDFDTTINAPFINALAMTHEVLTFDWPATGGSDGTPGDSYDI
DTLIRYCLEVLSLPVLNWIHGFEILDEPPGSPVQPPAELNPQDENNPSGP
SAAATATTVRYPVRTYKLINSTSSQQKITLVGHSSGGLMAAAMAPILKDI
VDKVVLLAPVGMVMELNRKLIFMRDHPILARITQPLMSVYPTLALKTFLD
CADRVKYLPEPLQANVKRKYESHVRSRCTSAIKQAINSSAAFPWTSGKEY
FTRLDDLDLETVLVLANDDAIIQCAKAKEQFEKYCPRINIVFRSVGGHDF
HLVYPVETLKLCGLQSI


Reference
    Title: Genomic minimalism in the early diverging intestinal parasite Giardia lamblia
    Morrison HG, McArthur AG, Gillin FD, Aley SB, Adam RD, Olsen GJ, Best AA, Cande WZ, Chen F and Sogin ML <19 more author(s)>
    Ref: Science, 317:1921, 2007 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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