Gene_Locus Report

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Gene_locus Report for: lacpl-LP.3205

Lactobacillus plantarum hypothetical protein

Comment
Other strains: Lactobacillus plantarum (strains ST-III; JDM1; subsp. plantarum ATCC 14917


Relationship
Family|Duf_915
Block| X
Position in NCBI Life Tree|Lactobacillus plantarum
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Lactobacillales: N E > Lactobacillaceae: N E > Lactobacillus: N E > Lactobacillus plantarum: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AL935261
1 UniProt : D7VFH6
1 UniProt : D7VFH6
1 Interpro : D7VFH6
1 Pfam : D7VFH6
1 PIRSF : D7VFH6
1 SUPERFAM : D7VFH6
Sequence
Graphical view for this peptide sequence: lacpl-LP.3205
Colored MSA for Duf_915 (raw)
MKATTKQVLTGATWLVVLLAMIGGTMLWQQQVHKSKPVTTITVTSTERIP
MVLLLDDHLTHNQIQQLTAHIQNSSATQTLVTAKITATGTVTFKGQLLNS
DNRPYIQVQLPKNLDSNRQTHLLKQLLTAARQQFKFRRFNLVSYGRGGLT
ATNYVEHTTTSLSPQHLVLMATPFNGASRQSNNRRQTTPVAAKSQTATLA
KLIAHRHTIDSKMQVLIVAGKAIKADQPLPLQSALAGQSIFKPVVKVYQQ
KVLRSWRTQSGLLNNHQIGNTIQTFIN
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MKATTKQVLTGATWLVVLLAMIGGTMLWQQQVHKSKPVTTITVTSTERIP
MVLLLDDHLTHNQIQQLTAHIQNSSATQTLVTAKITATGTVTFKGQLLNS
DNRPYIQVQLPKNLDSNRQTHLLKQLLTAARQQFKFRRFNLVSYGRGGLT
ATNYVEHTTTSLSPQHLVLMATPFNGASRQSNNRRQTTPVAAKSQTATLA
KLIAHRHTIDSKMQVLIVAGKAIKADQPLPLQSALAGQSIFKPVVKVYQQ
KVLRSWRTQSGLLNNHQIGNTIQTFIN


References
    Title: Complete genome sequence of Lactobacillus plantarum JDM1
    Zhang ZY, Liu C, Zhu YZ, Zhong Y, Zhu YQ, Zheng HJ, Zhao GP, Wang SY, Guo XK
    Ref: Journal of Bacteriology, 191:5020, 2009 : PubMed

            

    Title: Complete genome sequence of Lactobacillus plantarum WCFS1
    Kleerebezem M, Boekhorst J, van Kranenburg R, Molenaar D, Kuipers OP, Leer R, Tarchini R, Peters SA, Sandbrink HM and Siezen RJ <10 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 100:1990, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
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