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de Vos WM

References (11)

Title : Expanding the biotechnology potential of lactobacilli through comparative genomics of 213 strains and associated genera - Sun_2015_Nat.Commun_6_8322
Author(s) : Sun Z , Harris HM , McCann A , Guo C , Argimon S , Zhang W , Yang X , Jeffery IB , Cooney JC , Kagawa TF , Liu W , Song Y , Salvetti E , Wrobel A , Rasinkangas P , Parkhill J , Rea MC , O'Sullivan O , Ritari J , Douillard FP , Paul Ross R , Yang R , Briner AE , Felis GE , de Vos WM , Barrangou R , Klaenhammer TR , Caufield PW , Cui Y , Zhang H , O'Toole PW
Ref : Nat Commun , 6 :8322 , 2015
Abstract :
PubMedSearch : Sun_2015_Nat.Commun_6_8322
PubMedID: 26415554
Gene_locus related to this paper: 9laco-a0a0r1hz65 , 9laco-a0a0r1j1t4 , 9laco-a0a0r1j3p0 , 9laco-a0a0r1k3i0 , 9laco-a0a0r1k563 , 9laco-a0a0r1kgb3 , 9laco-a0a0r1kji2 , 9laco-a0a0r1kwq5 , 9laco-a0a0r1l700 , 9laco-a0a0r1p6l8 , 9laco-a0a0r1q939 , 9laco-a0a0r1qv39 , 9laco-a0a0r1wj75 , laccl-a0a0r2bne3 , 9laco-a0a0r2dnk9 , 9laco-a0a0r2ds70 , 9laco-a0a0r2k127 , 9laco-a0a0r2lee7 , 9laco-a0a0r2lqt2 , 9laco-a0a0r2m354 , 9laco-a0a0r2n9f2 , 9laco-a0a0r2nrk2 , lacze-a0a0r1ekw6 , 9laco-a0a0r1ju11 , 9laco-a0a0r1k516 , 9laco-a0a0r1leq9 , 9laco-a0a0r1lul8 , 9laco-a0a0r1lzg4 , 9laco-a0a0r1mhp8 , 9laco-a0a0r1mjt1 , 9laco-a0a0r1nv21 , 9laco-a0a0r1q1p6 , 9laco-a0a0r1qm41 , 9laco-a0a0r1qs58 , 9laco-a0a0r1rgu0 , 9laco-a0a0r1tg12 , 9laco-a0a0r1u777 , 9laco-a0a0r1ufv3 , 9laco-a0a0r1ul77 , 9laco-a0a0r1vad0 , 9laco-a0a0r1w3f4 , 9laco-a0a0r1w9r8 , 9laco-a0a0r1wpq2 , 9laco-a0a0r1x2g3 , 9laco-a0a0r2abe6 , 9laco-a0a0r2b6w1 , 9laco-a0a0r2b8g1 , 9laco-a0a0r2ch10 , 9laco-a0a0r2cld6 , 9laco-a0a0r2cv38 , 9laco-a0a0r2d3x3 , 9laco-a0a0r2dct2 , 9laco-a0a0r2flt3 , 9laco-a0a0r2frk5 , 9laco-a0a0r2guq4 , 9firm-a0a0r2h5m0 , weivi-a0a0r2h8r4 , 9lact-a0a0r2hnx4 , 9lact-a0a0r2jkt6 , 9lact-a0a0r2jmz1 , 9laco-a0a0r2jwg5 , 9laco-a0a0r2jxu0 , 9laco-a0a0r2jxw0 , lacam-a0a0r2kgt3 , 9laco-a0a0r2kx86 , 9laco-a0a0r2mxi6 , 9laco-a0a0r1vln2 , 9laco-a0a0r2ca25 , 9laco-a0a0r1zjs2 , weipa-c5rbw8

Title : Genome sequence of the verrucomicrobium Opitutus terrae PB90-1, an abundant inhabitant of rice paddy soil ecosystems - van Passel_2011_J.Bacteriol_193_2367
Author(s) : van Passel MW , Kant R , Palva A , Copeland A , Lucas S , Lapidus A , Glavina Del Rio T , Pitluck S , Goltsman E , Clum A , Sun H , Schmutz J , Larimer FW , Land ML , Hauser L , Kyrpides N , Mikhailova N , Richardson PP , Janssen PH , de Vos WM , Smidt H
Ref : Journal of Bacteriology , 193 :2367 , 2011
Abstract :
PubMedSearch : van Passel_2011_J.Bacteriol_193_2367
PubMedID: 21398538
Gene_locus related to this paper: opitp-b1zrm2

Title : Genome sequence of Lactobacillus amylovorus GRL1112 - Kant_2011_J.Bacteriol_193_789
Author(s) : Kant R , Paulin L , Alatalo E , de Vos WM , Palva A
Ref : Journal of Bacteriology , 193 :789 , 2011
Abstract :
PubMedSearch : Kant_2011_J.Bacteriol_193_789
PubMedID: 21131492
Gene_locus related to this paper: lache-pepx , lache-prolinase , lacar-e4sin9 , lacar-e4sjn9

Title : Functional genome analysis of Bifidobacterium breve UCC2003 reveals type IVb tight adherence (Tad) pili as an essential and conserved host-colonization factor - O'Connell_2011_Proc.Natl.Acad.Sci.U.S.A_108_11217
Author(s) : O'Connell Motherway M , Zomer A , Leahy SC , Reunanen J , Bottacini F , Claesson MJ , O'Brien F , Flynn K , Casey PG , Munoz JA , Kearney B , Houston AM , O'Mahony C , Higgins DG , Shanahan F , Palva A , de Vos WM , Fitzgerald GF , Ventura M , O'Toole PW , van Sinderen D
Ref : Proc Natl Acad Sci U S A , 108 :11217 , 2011
Abstract :
PubMedSearch : O'Connell_2011_Proc.Natl.Acad.Sci.U.S.A_108_11217
PubMedID: 21690406
Gene_locus related to this paper: bifln-c2gtr2

Title : Genome sequence of Lactobacillus amylovorus GRL1118, isolated from pig ileum - Kant_2011_J.Bacteriol_193_3147
Author(s) : Kant R , Paulin L , Alatalo E , de Vos WM , Palva A
Ref : Journal of Bacteriology , 193 :3147 , 2011
Abstract :
PubMedSearch : Kant_2011_J.Bacteriol_193_3147
PubMedID: 21478337
Gene_locus related to this paper: lache-pepx , lache-prolinase

Title : Genome sequence of Chthoniobacter flavus Ellin428, an aerobic heterotrophic soil bacterium - Kant_2011_J.Bacteriol_193_2902
Author(s) : Kant R , van Passel MW , Palva A , Lucas S , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Larimer FW , Land ML , Hauser L , Sangwan P , de Vos WM , Janssen PH , Smidt H
Ref : Journal of Bacteriology , 193 :2902 , 2011
Abstract :
PubMedSearch : Kant_2011_J.Bacteriol_193_2902
PubMedID: 21460085
Gene_locus related to this paper: 9bact-b4cw55 , 9bact-b4cx55 , 9bact-b4cy19 , 9bact-b4cyt2 , 9bact-b4cyu5 , 9bact-b4cza3 , 9bact-b4d1u0 , 9bact-b4d2s5 , 9bact-b4d373 , 9bact-b4d393 , 9bact-b4d914 , 9bact-b4daa7 , 9bact-b4dav5 , 9bact-b4db04 , 9bact-b4dc95 , 9bact-b4d3q8.1 , 9bact-b4d3q8.2

Title : Genome sequence of Pedosphaera parvula Ellin514, an aerobic Verrucomicrobial isolate from pasture soil - Kant_2011_J.Bacteriol_193_2900
Author(s) : Kant R , van Passel MW , Sangwan P , Palva A , Lucas S , Copeland A , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Chertkov O , Larimer FW , Land ML , Hauser L , Brettin TS , Detter JC , Han S , de Vos WM , Janssen PH , Smidt H
Ref : Journal of Bacteriology , 193 :2900 , 2011
Abstract :
PubMedSearch : Kant_2011_J.Bacteriol_193_2900
PubMedID: 21460084
Gene_locus related to this paper: 9bact-b9xah7.1 , 9bact-b9xah7.2 , 9bact-b9xba2 , 9bact-b9xfz4 , 9bact-b9xh19 , 9bact-b9xhn8 , 9bact-b9xj62 , 9bact-b9xjh1 , 9bact-b9xku6 , 9bact-b9xku8 , 9bact-b9xnx1 , 9bact-b9xp64 , 9bact-b9xp74

Title : Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract - van Passel_2011_J.Bacteriol_193_2373
Author(s) : van Passel MW , Kant R , Palva A , Lucas S , Copeland A , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Davenport KW , Sims D , Brettin TS , Detter JC , Han S , Larimer FW , Land ML , Hauser L , Kyrpides N , Ovchinnikova G , Richardson PP , de Vos WM , Smidt H , Zoetendal EG
Ref : Journal of Bacteriology , 193 :2373 , 2011
Abstract :
PubMedSearch : van Passel_2011_J.Bacteriol_193_2373
PubMedID: 21398537
Gene_locus related to this paper: 9bact-d1n3e0 , 9bact-d1n3w1 , 9bact-d1n5u2 , 9bact-d1n6r9 , 9bact-d1n8l2 , 9bact-d1n8z8 , 9bact-d1n9n1 , 9bact-d1n9u1 , 9bact-d1n752 , 9bact-d1n881 , 9bact-d1naa7 , 9bact-d1nb62 , 9bact-d1nbd5 , 9bact-d1nbg1 , 9bact-d1nbh9 , 9bact-d1nbv9

Title : Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein - Kankainen_2009_Proc.Natl.Acad.Sci.U.S.A_106_17193
Author(s) : Kankainen M , Paulin L , Tynkkynen S , von Ossowski I , Reunanen J , Partanen P , Satokari R , Vesterlund S , Hendrickx AP , Lebeer S , De Keersmaecker SC , Vanderleyden J , Hamalainen T , Laukkanen S , Salovuori N , Ritari J , Alatalo E , Korpela R , Mattila-Sandholm T , Lassig A , Hatakka K , Kinnunen KT , Karjalainen H , Saxelin M , Laakso K , Surakka A , Palva A , Salusjarvi T , Auvinen P , de Vos WM
Ref : Proc Natl Acad Sci U S A , 106 :17193 , 2009
Abstract :
PubMedSearch : Kankainen_2009_Proc.Natl.Acad.Sci.U.S.A_106_17193
PubMedID: 19805152
Gene_locus related to this paper: lacrg-c7tei3 , lacrh-B2CZF3 , lacrh-b5qmk1 , lacrh-pepr , lacrh-pepx , lacrl-pip

Title : Complete genome sequence of Lactobacillus plantarum WCFS1 - Kleerebezem_2003_Proc.Natl.Acad.Sci.U.S.A_100_1990
Author(s) : Kleerebezem M , Boekhorst J , van Kranenburg R , Molenaar D , Kuipers OP , Leer R , Tarchini R , Peters SA , Sandbrink HM , Fiers MW , Stiekema W , Lankhorst RM , Bron PA , Hoffer SM , Groot MN , Kerkhoven R , De Vries M , Ursing B , de Vos WM , Siezen RJ
Ref : Proc Natl Acad Sci U S A , 100 :1990 , 2003
Abstract :
PubMedSearch : Kleerebezem_2003_Proc.Natl.Acad.Sci.U.S.A_100_1990
PubMedID: 12566566
Gene_locus related to this paper: lacpl-EST1 , lacpl-EST2 , lacpl-HPO , lacpl-LP.0461 , lacpl-LP.0618 , lacpl-LP.0796 , lacpl-LP.0973 , lacpl-LP.1002 , lacpl-LP.1124 , lacpl-LP.1156 , lacpl-LP.1165 , lacpl-LP.1760 , lacpl-LP.1774 , lacpl-LP.1935 , lacpl-LP.2519 , lacpl-LP.2586 , lacpl-LP.2620 , lacpl-LP.2631 , lacpl-LP.2737 , lacpl-LP.2923 , lacpl-LP.2953 , lacpl-LP.3205 , lacpl-LP.3265 , lacpl-LP.3341 , lacpl-LP.3393 , lacpl-LP.3561 , lacpl-LP.3562 , lacpl-PEPI , lacpl-PEPR1 , lacpl-PEPR2 , lacpl-pepx , lacpl-tanL

Title : Sequence analysis of the Pseudomonas sp. strain P51 tcb gene cluster, which encodes metabolism of chlorinated catechols: evidence for specialization of catechol 1,2-dioxygenases for chlorinated substrates - van der Meer_1991_J.Bacteriol_173_2425
Author(s) : van der Meer JR , Eggen RI , Zehnder AJ , de Vos WM
Ref : Journal of Bacteriology , 173 :2425 , 1991
Abstract :
PubMedSearch : van der Meer_1991_J.Bacteriol_173_2425
PubMedID: 2013566
Gene_locus related to this paper: alceu-CBNC