Gene_Locus Report

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Gene_locus Report for: rhocb-d5al14

Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003). Proline iminopeptidase

Relationship
Family|Proline_iminopeptidase
Block| X
Position in NCBI Life Tree|Rhodobacter capsulatus
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Alphaproteobacteria: N E > Rhodobacterales: N E > Rhodobacteraceae: N E > Rhodobacter: N E > Rhodobacter capsulatus: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : CP001312
1 UniProt : D5AL14
1 UniProt : D5AL14
1 Interpro : D5AL14
1 Pfam : D5AL14
1 PIRSF : D5AL14
1 SUPERFAM : D5AL14
Sequence
Graphical view for this peptide sequence: rhocb-d5al14
Colored MSA for Proline_iminopeptidase (raw)
MTPSLRPLFPEITPRKTGRLRVSALHEIHYEDCGNPAGQPVLILHGGPGA
GIAPFLRRSHDPARYRIVLADQRGAGQSTPPGELRENTTADLVADIEALR
DHLGIARWQIVGGSWGSTLALAYGLAHPGRITGMILRGIFTGRRVELDWF
YQHGAGMILPEAFAAYRALIPAAEQEAMIAAYHRRLTGPAGPERLAAAKA
WADWEEAALRLIPRPAAPEDPQETEAFARIECHYFANGCFFPTDGWLLDQ
VRASAALRAVPCHILQGRYDLVTPAATALALAKAWPEATLTLVPDAGHSG
TEPGIADAMVRAATALADQDPRQDGSSLPSPQSTEETPA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTPSLRPLFPEITPRKTGRLRVSALHEIHYEDCGNPAGQPVLILHGGPGA
GIAPFLRRSHDPARYRIVLADQRGAGQSTPPGELRENTTADLVADIEALR
DHLGIARWQIVGGSWGSTLALAYGLAHPGRITGMILRGIFTGRRVELDWF
YQHGAGMILPEAFAAYRALIPAAEQEAMIAAYHRRLTGPAGPERLAAAKA
WADWEEAALRLIPRPAAPEDPQETEAFARIECHYFANGCFFPTDGWLLDQ
VRASAALRAVPCHILQGRYDLVTPAATALALAKAWPEATLTLVPDAGHSG
TEPGIADAMVRAATALADQDPRQDGSSLPSPQSTEETPA


Reference
    Title: Complete genome sequence of the photosynthetic purple nonsulfur bacterium Rhodobacter capsulatus SB 1003
    Strnad H, Lapidus A, Paces J, Ulbrich P, Vlcek C, Paces V, Haselkorn R
    Ref: Journal of Bacteriology, 192:3545, 2010 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
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