Gene_Locus Report

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Gene_locus Report for: synpx-q7u3b1

Synechococcus sp. (strain WH8102) hypothetical protein precursor

Relationship
Family|AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Synechococcus sp.
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Cyanobacteria/Melainabacteria group: N E > Cyanobacteria: N E > Synechococcales: N E > Synechococcaceae: N E > Synechococcus: N E > Synechococcus sp.: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : BX569695
1 UniProt : Q7U3B1
1 UniProt : Q7U3B1
1 Interpro : Q7U3B1
1 Pfam : Q7U3B1
1 PIRSF : Q7U3B1
1 SUPERFAM : Q7U3B1
Sequence
Graphical view for this peptide sequence: synpx-q7u3b1
Colored MSA for AlphaBeta_hydrolase (raw)
MTRCRNHWAAFLSGLALSGFAAPAQALEHLMLRMPFLETSVTINLGEAES
ASELIRSSPDLDDLQSASGGQLLDLISKIFLAPLPVETKAFLEGSTGQPL
LEQALIAAADLVDLDGVDPDTSGRMLTDALVRAERNGQPNVLGFLRELPG
DQASIDLSRVAVAANRLKANQEQGVALALAGPAETVTPSLRAPLKPSWTR
QVVRLSVTHRPQLLRVLTLVPNGSANGRLVVISHGLWDDPESFEGWGEVL
AAQGYTVLLPDHPGSDFSQQKAMLAGDRPPPGPEELRLRPLDVSALLDAV
ESGRLMKGRGLNTETVAVVGHSWGATTTLQLAGGVPTERKLKSHCSDLKD
PERNLSWVLQCSWLSGINRAGIADQRVKAVVAVSPPLRLLFEPTSTTSLN
SKVLLISGTRDWVVPSGPEAISPMRDTKAAQFGHRLVLVRGADHFSLRSF
QGEDRPALVGPLLLAWINEQLGVNGVVSFRGGGWGDDQVDLVDVSNKL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MTRCRNHWAAFLSGLALSGFAAPAQALEHLMLRMPFLETSVTINLGEAES
ASELIRSSPDLDDLQSASGGQLLDLISKIFLAPLPVETKAFLEGSTGQPL
LEQALIAAADLVDLDGVDPDTSGRMLTDALVRAERNGQPNVLGFLRELPG
DQASIDLSRVAVAANRLKANQEQGVALALAGPAETVTPSLRAPLKPSWTR
QVVRLSVTHRPQLLRVLTLVPNGSANGRLVVISHGLWDDPESFEGWGEVL
AAQGYTVLLPDHPGSDFSQQKAMLAGDRPPPGPEELRLRPLDVSALLDAV
ESGRLMKGRGLNTETVAVVGHSWGATTTLQLAGGVPTERKLKSHCSDLKD
PERNLSWVLQCSWLSGINRAGIADQRVKAVVAVSPPLRLLFEPTSTTSLN
SKVLLISGTRDWVVPSGPEAISPMRDTKAAQFGHRLVLVRGADHFSLRSF
QGEDRPALVGPLLLAWINEQLGVNGVVSFRGGGWGDDQVDLVDVSNKL


Reference
    Title: The genome of a motile marine Synechococcus
    Palenik B, Brahamsha B, Larimer FW, Land M, Hauser L, Chain P, Lamerdin J, Regala W, Allen EE and Waterbury J <5 more author(s)>
    Ref: Nature, 424:1037, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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