Han_2011_J.Bacteriol_193_1183

Reference

Title : Complete genome sequence of the metabolically versatile plant growth-promoting endophyte Variovorax paradoxus S110 - Han_2011_J.Bacteriol_193_1183
Author(s) : Han JI , Choi HK , Lee SW , Orwin PM , Kim J , Laroe SL , Kim TG , O'Neil J , Leadbetter JR , Lee SY , Hur CG , Spain JC , Ovchinnikova G , Goodwin L , Han C
Ref : Journal of Bacteriology , 193 :1183 , 2011
Abstract :

Variovorax paradoxus is a microorganism of special interest due to its diverse metabolic capabilities, including the biodegradation of both biogenic compounds and anthropogenic contaminants. V. paradoxus also engages in mutually beneficial interactions with both bacteria and plants. The complete genome sequence of V. paradoxus S110 is composed of 6,754,997 bp with 6,279 predicted protein-coding sequences within two circular chromosomes. Genomic analysis has revealed multiple metabolic features for autotrophic and heterotrophic lifestyles. These metabolic diversities enable independent survival, as well as a symbiotic lifestyle. Consequently, S110 appears to have evolved into a superbly adaptable microorganism that is able to survive in ever-changing environmental conditions. Based on our findings, we suggest V. paradoxus S110 as a potential candidate for agrobiotechnological applications, such as biofertilizer and biopesticide. Because it has many associations with other biota, it is also suited to serve as an additional model system for studies of microbe-plant and microbe-microbe interactions.

PubMedSearch : Han_2011_J.Bacteriol_193_1183
PubMedID: 21183664
Gene_locus related to this paper: varps-c5cla8 , varps-c5cld3 , varps-c5cle8 , varps-c5cmg7 , varps-c5cmn3 , varps-c5cmq5 , varps-c5cn77 , varps-c5cpt8 , varps-c5cqf4 , varps-c5crj1 , varps-c5crm2 , varps-c5csa3 , varps-c5csp0 , varps-c5ct29 , varps-c5ct59 , varps-c5ctz6 , varps-c5cu01 , varps-c5cu02 , varps-c5cuk9 , varps-c5cw29 , varps-c5czm3 , varps-c5czm7 , varps-c5czs2 , varps-c5czw9 , varps-c5czx0 , varps-c5czz1 , varps-c5d0w2 , varps-c5d1f5 , varps-c5d1m4 , varps-c5d1p7 , varps-c5d1r3 , varps-c5d033 , varpd-t1x730 , varps-c5cyt5 , varps-rutd

Related information

Gene_locus varps-c5cla8    varps-c5cld3    varps-c5cle8    varps-c5cmg7    varps-c5cmn3    varps-c5cmq5    varps-c5cn77    varps-c5cpt8    varps-c5cqf4    varps-c5crj1    varps-c5crm2    varps-c5csa3    varps-c5csp0    varps-c5ct29    varps-c5ct59    varps-c5ctz6    varps-c5cu01    varps-c5cu02    varps-c5cuk9    varps-c5cw29    varps-c5czm3    varps-c5czm7    varps-c5czs2    varps-c5czw9    varps-c5czx0    varps-c5czz1    varps-c5d0w2    varps-c5d1f5    varps-c5d1m4    varps-c5d1p7    varps-c5d1r3    varps-c5d033    varpd-t1x730    varps-c5cyt5    varps-rutd

Citations formats

Han JI, Choi HK, Lee SW, Orwin PM, Kim J, Laroe SL, Kim TG, O'Neil J, Leadbetter JR, Lee SY, Hur CG, Spain JC, Ovchinnikova G, Goodwin L, Han C (2011)
Complete genome sequence of the metabolically versatile plant growth-promoting endophyte Variovorax paradoxus S110
Journal of Bacteriology 193 :1183

Han JI, Choi HK, Lee SW, Orwin PM, Kim J, Laroe SL, Kim TG, O'Neil J, Leadbetter JR, Lee SY, Hur CG, Spain JC, Ovchinnikova G, Goodwin L, Han C (2011)
Journal of Bacteriology 193 :1183