Ochiai_2005_Jpn.Agric.Res.Q_39_275

Reference

Title : Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity - Ochiai_2005_Jpn.Agric.Res.Q_39_275
Author(s) : Inoue Y , Takeya M , Sasaki A , Kaki H
Ref : , 39 :275 , 2005
Abstract :

The plant-pathogenic prokaryote Xanthomonas oryzae pv. oryzae (Xoo) causes bacterial blight, one of the most important diseases of rice. The bacterium is a model organism for the analysis of plant-pathogen interaction, because more than 30 races differing in virulence and 25 resistance genes in rice have been reported to date. We present here the complete genome sequence of Xoo strain MAFF 311018. The size of the genome was 4,940,217 bp, in a single circular chromosome. The genome structure of Xoo MAFF 311018 was characterized by large numbers of effector (avr) genes of the avrBs3/pth family and insertion sequences (ISs). RFLP analysis of diverse strains using ISXo1 as a probe suggests that the prevalence of mobile elements in this species, which can bring about genome inversions and rearrangement, may have played a major role in generating the high degree of genetic diversity and race differentiation characteristic of this pathogen. The Xoo MAFF 311018 sequence was also highly similar to those of X. axonopodis pv. citri and X. campestris pv. campestris with the exception of the large number of effectors and IS elements, and numerous inversions and rearrangements.

PubMedSearch : Ochiai_2005_Jpn.Agric.Res.Q_39_275
PubMedID:
Gene_locus related to this paper: xanax-GAA , xanax-PTRB , xanax-XAC0628 , xanax-XAC0736 , xanax-XAC1713 , xanax-XAC3152 , xanca-impep , xanca-XCC1105 , xanca-XCC2566 , xanor-acvB , xanor-bioh , xanor-metx , xanor-q5gu74 , xanor-q5guj3 , xanor-q5guw6 , xanor-q5gv06 , xanor-q5gvh5 , xanor-q5gvh6 , xanor-q5gvk9 , xanor-q5gwc8 , xanor-q5gy36 , xanor-q5gy47 , xanor-q5gyv6 , xanor-q5gz98 , xanor-q5h0m2 , xanor-q5h0p6 , xanor-q5h1g5 , xanor-q5h1l1 , xanor-q5h1v0 , xanor-q5h1w4 , xanor-q5h2y0 , xanor-q5h3e2 , xanor-q5h3e8 , xanor-q5h5m9 , xanor-q5h5n1 , xanor-q5h5s2 , xanor-q5h5w8 , xanor-q5h5x9 , xanor-q5h236 , xanor-Q93M73

Related information

Gene_locus xanax-GAA    xanax-PTRB    xanax-XAC0628    xanax-XAC0736    xanax-XAC1713    xanax-XAC3152    xanca-impep    xanca-XCC1105    xanca-XCC2566    xanor-acvB    xanor-bioh    xanor-metx    xanor-q5gu74    xanor-q5guj3    xanor-q5guw6    xanor-q5gv06    xanor-q5gvh5    xanor-q5gvh6    xanor-q5gvk9    xanor-q5gwc8    xanor-q5gy36    xanor-q5gy47    xanor-q5gyv6    xanor-q5gz98    xanor-q5h0m2    xanor-q5h0p6    xanor-q5h1g5    xanor-q5h1l1    xanor-q5h1v0    xanor-q5h1w4    xanor-q5h2y0    xanor-q5h3e2    xanor-q5h3e8    xanor-q5h5m9    xanor-q5h5n1    xanor-q5h5s2    xanor-q5h5w8    xanor-q5h5x9    xanor-q5h236    xanor-Q93M73
Gene_locus_frgt xanax-GAA    xanax-PTRB    xanax-XAC0628    xanax-XAC0736    xanax-XAC1713    xanax-XAC3152    xanca-impep    xanca-XCC1105    xanca-XCC2566    xanor-acvB    xanor-bioh    xanor-metx    xanor-q5gu74    xanor-q5guj3    xanor-q5guw6    xanor-q5gv06    xanor-q5gvh5    xanor-q5gvh6    xanor-q5gvk9    xanor-q5gwc8    xanor-q5gy36    xanor-q5gy47    xanor-q5gyv6    xanor-q5gz98    xanor-q5h0m2    xanor-q5h0p6    xanor-q5h1g5    xanor-q5h1l1    xanor-q5h1v0    xanor-q5h1w4    xanor-q5h2y0    xanor-q5h3e2    xanor-q5h3e8    xanor-q5h5m9    xanor-q5h5n1    xanor-q5h5s2    xanor-q5h5w8    xanor-q5h5x9    xanor-q5h236    xanor-Q93M73    xanor-q5guf7    xanor-q5gul3    xanor-q5gxd1    xanor-q5h5h4

Citations formats

Inoue Y, Takeya M, Sasaki A, Kaki H (2005)
Genome sequence of Xanthomonas oryzae pv. oryzae suggests contribution of large numbers of effector genes and insertion sequences to its race diversity
39 :275

Inoue Y, Takeya M, Sasaki A, Kaki H (2005)
39 :275