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Denef VJ

References (12)

Title : Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing Leptospirillum rubarum (Group II) and Leptospirillum ferrodiazotrophum (Group III) bacteria in acid mine drainage biofilms - Goltsman_2009_Appl.Environ.Microbiol_75_4599
Author(s) : Goltsman DS , Denef VJ , Singer SW , VerBerkmoes NC , Lefsrud M , Mueller RS , Dick GJ , Sun CL , Wheeler KE , Zemla A , Baker BJ , Hauser L , Land M , Shah MB , Thelen MP , Hettich RL , Banfield JF
Ref : Applied Environmental Microbiology , 75 :4599 , 2009
Abstract :
PubMedSearch : Goltsman_2009_Appl.Environ.Microbiol_75_4599
PubMedID: 19429552

Title : Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing Leptospirillum rubarum (Group II) and Leptospirillum ferrodiazotrophum (Group III) bacteria in acid mine drainage biofilms - Goltsman_2009_Appl.Environ.Microbiol_75_4599
Author(s) : Goltsman DS , Denef VJ , Singer SW , VerBerkmoes NC , Lefsrud M , Mueller RS , Dick GJ , Sun CL , Wheeler KE , Zemla A , Baker BJ , Hauser L , Land M , Shah MB , Thelen MP , Hettich RL , Banfield JF
Ref : Applied Environmental Microbiology , 75 :4599 , 2009
Abstract :
PubMedSearch : Goltsman_2009_Appl.Environ.Microbiol_75_4599
PubMedID: 19429552

Title : Community genomic and proteomic analyses of chemoautotrophic iron-oxidizing Leptospirillum rubarum (Group II) and Leptospirillum ferrodiazotrophum (Group III) bacteria in acid mine drainage biofilms - Goltsman_2009_Appl.Environ.Microbiol_75_4599
Author(s) : Goltsman DS , Denef VJ , Singer SW , VerBerkmoes NC , Lefsrud M , Mueller RS , Dick GJ , Sun CL , Wheeler KE , Zemla A , Baker BJ , Hauser L , Land M , Shah MB , Thelen MP , Hettich RL , Banfield JF
Ref : Applied Environmental Microbiology , 75 :4599 , 2009
Abstract :
PubMedSearch : Goltsman_2009_Appl.Environ.Microbiol_75_4599
PubMedID: 19429552

Title : Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation - Simmons_2008_PLoS.Biol_6_e177
Author(s) : Simmons SL , DiBartolo G , Denef VJ , Goltsman DS , Thelen MP , Banfield JF
Ref : PLoS Biol , 6 :e177 , 2008
Abstract :
PubMedSearch : Simmons_2008_PLoS.Biol_6_e177
PubMedID: 18651792

Title : Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation - Simmons_2008_PLoS.Biol_6_e177
Author(s) : Simmons SL , DiBartolo G , Denef VJ , Goltsman DS , Thelen MP , Banfield JF
Ref : PLoS Biol , 6 :e177 , 2008
Abstract :
PubMedSearch : Simmons_2008_PLoS.Biol_6_e177
PubMedID: 18651792

Title : Population genomic analysis of strain variation in Leptospirillum group II bacteria involved in acid mine drainage formation - Simmons_2008_PLoS.Biol_6_e177
Author(s) : Simmons SL , DiBartolo G , Denef VJ , Goltsman DS , Thelen MP , Banfield JF
Ref : PLoS Biol , 6 :e177 , 2008
Abstract :
PubMedSearch : Simmons_2008_PLoS.Biol_6_e177
PubMedID: 18651792

Title : Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria - Lo_2007_Nature_446_537
Author(s) : Lo I , Denef VJ , VerBerkmoes NC , Shah MB , Goltsman D , DiBartolo G , Tyson GW , Allen EE , Ram RJ , Detter JC , Richardson P , Thelen MP , Hettich RL , Banfield JF
Ref : Nature , 446 :537 , 2007
Abstract :
PubMedSearch : Lo_2007_Nature_446_537
PubMedID: 17344860

Title : Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria - Lo_2007_Nature_446_537
Author(s) : Lo I , Denef VJ , VerBerkmoes NC , Shah MB , Goltsman D , DiBartolo G , Tyson GW , Allen EE , Ram RJ , Detter JC , Richardson P , Thelen MP , Hettich RL , Banfield JF
Ref : Nature , 446 :537 , 2007
Abstract :
PubMedSearch : Lo_2007_Nature_446_537
PubMedID: 17344860

Title : Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria - Lo_2007_Nature_446_537
Author(s) : Lo I , Denef VJ , VerBerkmoes NC , Shah MB , Goltsman D , DiBartolo G , Tyson GW , Allen EE , Ram RJ , Detter JC , Richardson P , Thelen MP , Hettich RL , Banfield JF
Ref : Nature , 446 :537 , 2007
Abstract :
PubMedSearch : Lo_2007_Nature_446_537
PubMedID: 17344860

Title : Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility - Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
Author(s) : Chain PS , Denef VJ , Konstantinidis KT , Vergez LM , Agullo L , Reyes VL , Hauser L , Cordova M , Gomez L , Gonzalez M , Land M , Lao V , Larimer F , LiPuma JJ , Mahenthiralingam E , Malfatti SA , Marx CJ , Parnell JJ , Ramette A , Richardson P , Seeger M , Smith D , Spilker T , Sul WJ , Tsoi TV , Ulrich LE , Zhulin IB , Tiedje JM
Ref : Proc Natl Acad Sci U S A , 103 :15280 , 2006
Abstract :
PubMedSearch : Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
PubMedID: 17030797
Gene_locus related to this paper: burxl-metx , burxl-mhpc , burxl-q13fa9 , burxl-q13ha0 , burxl-q13mn9 , burxl-q13nr6 , burxl-q13ns4 , burxl-q13p13 , burxl-q13p37 , burxl-q13pg5 , burxl-q13ph5 , burxl-q13pw2 , burxl-q13q15 , burxl-q13qw4 , burxl-q13ri3 , burxl-q13ui7 , burxl-q13ul9 , burxl-q13uz6 , burxl-q13vd6 , burxl-q13xg6 , burxl-q146l5 , burxl-q13u43 , parxl-hboh

Title : Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility - Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
Author(s) : Chain PS , Denef VJ , Konstantinidis KT , Vergez LM , Agullo L , Reyes VL , Hauser L , Cordova M , Gomez L , Gonzalez M , Land M , Lao V , Larimer F , LiPuma JJ , Mahenthiralingam E , Malfatti SA , Marx CJ , Parnell JJ , Ramette A , Richardson P , Seeger M , Smith D , Spilker T , Sul WJ , Tsoi TV , Ulrich LE , Zhulin IB , Tiedje JM
Ref : Proc Natl Acad Sci U S A , 103 :15280 , 2006
Abstract :
PubMedSearch : Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
PubMedID: 17030797
Gene_locus related to this paper: burxl-metx , burxl-mhpc , burxl-q13fa9 , burxl-q13ha0 , burxl-q13mn9 , burxl-q13nr6 , burxl-q13ns4 , burxl-q13p13 , burxl-q13p37 , burxl-q13pg5 , burxl-q13ph5 , burxl-q13pw2 , burxl-q13q15 , burxl-q13qw4 , burxl-q13ri3 , burxl-q13ui7 , burxl-q13ul9 , burxl-q13uz6 , burxl-q13vd6 , burxl-q13xg6 , burxl-q146l5 , burxl-q13u43 , parxl-hboh

Title : Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility - Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
Author(s) : Chain PS , Denef VJ , Konstantinidis KT , Vergez LM , Agullo L , Reyes VL , Hauser L , Cordova M , Gomez L , Gonzalez M , Land M , Lao V , Larimer F , LiPuma JJ , Mahenthiralingam E , Malfatti SA , Marx CJ , Parnell JJ , Ramette A , Richardson P , Seeger M , Smith D , Spilker T , Sul WJ , Tsoi TV , Ulrich LE , Zhulin IB , Tiedje JM
Ref : Proc Natl Acad Sci U S A , 103 :15280 , 2006
Abstract :
PubMedSearch : Chain_2006_Proc.Natl.Acad.Sci.U.S.A_103_15280
PubMedID: 17030797
Gene_locus related to this paper: burxl-metx , burxl-mhpc , burxl-q13fa9 , burxl-q13ha0 , burxl-q13mn9 , burxl-q13nr6 , burxl-q13ns4 , burxl-q13p13 , burxl-q13p37 , burxl-q13pg5 , burxl-q13ph5 , burxl-q13pw2 , burxl-q13q15 , burxl-q13qw4 , burxl-q13ri3 , burxl-q13ui7 , burxl-q13ul9 , burxl-q13uz6 , burxl-q13vd6 , burxl-q13xg6 , burxl-q146l5 , burxl-q13u43 , parxl-hboh