| Title : Complete genome sequence of the Antarctic Halorubrum lacusprofundi type strain ACAM 34 - Anderson_2016_Stand.Genomic.Sci_11_70 |
| Author(s) : Anderson IJ , DasSarma P , Lucas S , Copeland A , Lapidus A , Del Rio TG , Tice H , Dalin E , Bruce DC , Goodwin L , Pitluck S , Sims D , Brettin TS , Detter JC , Han CS , Larimer F , Hauser L , Land M , Ivanova N , Richardson P , Cavicchioli R , DasSarma S , Woese CR , Kyrpides NC |
| Ref : Stand Genomic Sci , 11 :70 , 2016 |
| Abstract : |
| PubMedSearch : Anderson_2016_Stand.Genomic.Sci_11_70 |
| PubMedID: 27617060 |
| Gene_locus related to this paper: hallt-metxa |
| Title : Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds - Hwang_2016_Genome.Announc_4_e01226 |
| Author(s) : Hwang C , Copeland A , Lucas S , Lapidus A , Barry K , Detter JC , Glavina Del Rio T , Hammon N , Israni S , Dalin E , Tice H , Pitluck S , Chertkov O , Brettin T , Bruce D , Han C , Schmutz J , Larimer F , Land ML , Hauser L , Kyrpides N , Mikhailova N , Ye Q , Zhou J , Richardson P , Fields MW |
| Ref : Genome Announc , 4 : , 2016 |
| Abstract : |
| PubMedSearch : Hwang_2016_Genome.Announc_4_e01226 |
| PubMedID: 27811105 |
| Gene_locus related to this paper: alkmq-a6tu78 |
| Title : Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements - Riedel_2013_Stand.Genomic.Sci_8_389 |
| Author(s) : Riedel T , Teshima H , Petersen J , Fiebig A , Davenport K , Daligault H , Erkkila T , Gu W , Munk C , Xu Y , Chen A , Pati A , Ivanova N , Goodwin LA , Chain P , Detter JC , Rohde M , Gronow S , Kyrpides NC , Woyke T , Goker M , Brinkhoff T , Klenk HP |
| Ref : Stand Genomic Sci , 8 :389 , 2013 |
| Abstract : |
| PubMedSearch : Riedel_2013_Stand.Genomic.Sci_8_389 |
| PubMedID: 24501625 |
| Title : Complete genome sequence of Coriobacterium glomerans type strain (PW2(T)) from the midgut of Pyrrhocoris apterus L. (red soldier bug) - Stackebrandt_2013_Stand.Genomic.Sci_8_15 |
| Author(s) : Stackebrandt E , Zeytun A , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Goodwin LA , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Huntemann M , Pati A , Chen A , Palaniappan K , Chang YJ , Land M , Hauser L , Rohde M , Pukall R , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 8 :15 , 2013 |
| Abstract : |
| PubMedSearch : Stackebrandt_2013_Stand.Genomic.Sci_8_15 |
| PubMedID: 23961308 |
| Gene_locus related to this paper: corgp-f2n8w7 |
| Title : Complete Genome Sequence of Bacillus thuringiensis Serovar Israelensis Strain HD-789 - Doggett_2013_Genome.Announc_1_e01023 |
| Author(s) : Doggett NA , Stubben CJ , Chertkov O , Bruce DC , Detter JC , Johnson SL , Han CS |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Doggett_2013_Genome.Announc_1_e01023 |
| PubMedID: 24309743 |
| Gene_locus related to this paper: bacce-BC2171 , bacce-BC2337 , bacce-BC4102 |
| Title : Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift - Liolos_2013_Stand.Genomic.Sci_8_165 |
| Author(s) : Liolos K , Abt B , Scheuner C , Teshima H , Held B , Lapidus A , Nolan M , Lucas S , Deshpande S , Cheng JF , Tapia R , Goodwin LA , Pitluck S , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Huntemann M , Pati A , Chen A , Palaniappan K , Land M , Rohde M , Tindall BJ , Detter JC , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Woyke T , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 8 :165 , 2013 |
| Abstract : |
| PubMedSearch : Liolos_2013_Stand.Genomic.Sci_8_165 |
| PubMedID: 23991249 |
| Gene_locus related to this paper: spiaz-h9uj53 |
| Title : Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin - Murugapiran_2013_Genome.Announc_1_e00106 |
| Author(s) : Murugapiran SK , Huntemann M , Wei CL , Han J , Detter JC , Han CS , Erkkila TH , Teshima H , Chen A , Kyrpides N , Mavrommatis K , Markowitz V , Szeto E , Ivanova N , Pagani I , Lam J , McDonald AI , Dodsworth JA , Pati A , Goodwin L , Peters L , Pitluck S , Woyke T , Hedlund BP |
| Ref : Genome Announc , 1 : , 2013 |
| Abstract : |
| PubMedSearch : Murugapiran_2013_Genome.Announc_1_e00106 |
| PubMedID: 23405355 |
| Gene_locus related to this paper: thet2-q72hz1 , thet2-q72j75 , theth-TTC1787 , theos-k7r7w9 , theos-k7r725 , theth-h9zpz9 , theos-k7riw9 , theos-k7qw42 , theos-k7r3i4 |
| Title : Nearly finished genomes produced using gel microdroplet culturing reveal substantial intraspecies genomic diversity within the human microbiome - Fitzsimons_2013_Genome.Res_23_878 |
| Author(s) : Fitzsimons MS , Novotny M , Lo CC , Dichosa AE , Yee-Greenbaum JL , Snook JP , Gu W , Chertkov O , Davenport KW , McMurry K , Reitenga KG , Daughton AR , He J , Johnson SL , Gleasner CD , Wills PL , Parson-Quintana B , Chain PS , Detter JC , Lasken RS , Han CS |
| Ref : Genome Res , 23 :878 , 2013 |
| Abstract : |
| PubMedSearch : Fitzsimons_2013_Genome.Res_23_878 |
| PubMedID: 23493677 |
| Gene_locus related to this paper: 9stre-k0zi65 |
| Title : Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov., Treponema stenostrepta comb. nov., and Treponema zuelzerae comb. nov., and emendation of the genus Treponema - Abt_2013_Stand.Genomic.Sci_8_88 |
| Author(s) : Abt B , Goker M , Scheuner C , Han C , Lu M , Misra M , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Goodwin LA , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Huntemann M , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Jeffries CD , Rohde M , Spring S , Gronow S , Detter JC , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Woyke T , Klenk HP |
| Ref : Stand Genomic Sci , 8 :88 , 2013 |
| Abstract : |
| PubMedSearch : Abt_2013_Stand.Genomic.Sci_8_88 |
| PubMedID: 23961314 |
| Gene_locus related to this paper: trech-f8f1l1 |
| Title : Complete Genome Sequence of the Encephalomyelitic Burkholderia pseudomallei Strain MSHR305 - Stone_2013_Genome.Announc_1_e00656 |
| Author(s) : Stone JK , Johnson SL , Bruce DC , Detter JC , Mayo M , Currie BJ , Gelhaus HC , Keim P , Tuanyok A |
| Ref : Genome Announc , 1 :e00656 , 2013 |
| Abstract : |
| PubMedSearch : Stone_2013_Genome.Announc_1_e00656 |
| PubMedID: 23969058 |
| Gene_locus related to this paper: burma-a5tq93 , burma-q62mq7 |
| Title : Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1(T)) - Han_2012_Stand.Genomic.Sci_6_94 |
| Author(s) : Han C , Kotsyurbenko O , Chertkov O , Held B , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Goodwin LA , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brambilla EM , Rohde M , Spring S , Sikorski J , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Detter JC |
| Ref : Stand Genomic Sci , 6 :94 , 2012 |
| Abstract : |
| PubMedSearch : Han_2012_Stand.Genomic.Sci_6_94 |
| PubMedID: 22675602 |
| Gene_locus related to this paper: sulky-e4u307 |
| Title : Complete genome sequence of Polynucleobacter necessarius subsp. asymbioticus type strain (QLW-P1DMWA-1(T)) - Meincke_2012_Stand.Genomic.Sci_6_74 |
| Author(s) : Meincke L , Copeland A , Lapidus A , Lucas S , Berry KW , Del Rio TG , Hammon N , Dalin E , Tice H , Pitluck S , Richardson P , Bruce D , Goodwin L , Han C , Tapia R , Detter JC , Schmutz J , Brettin T , Larimer F , Land M , Hauser L , Kyrpides NC , Ivanova N , Goker M , Woyke T , Wu QL , Pockl M , Hahn MW , Klenk HP |
| Ref : Stand Genomic Sci , 6 :74 , 2012 |
| Abstract : |
| PubMedSearch : Meincke_2012_Stand.Genomic.Sci_6_74 |
| PubMedID: 22675600 |
| Gene_locus related to this paper: polsq-a4sxg1 , polsq-a4sxf4 |
| Title : Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park - Mead_2012_Stand.Genomic.Sci_6_381 |
| Author(s) : Mead DA , Lucas S , Copeland A , Lapidus A , Cheng JF , Bruce DC , Goodwin LA , Pitluck S , Chertkov O , Zhang X , Detter JC , Han CS , Tapia R , Land M , Hauser LJ , Chang YJ , Kyrpides NC , Ivanova NN , Ovchinnikova G , Woyke T , Brumm C , Hochstein R , Schoenfeld T , Brumm P |
| Ref : Stand Genomic Sci , 6 :381 , 2012 |
| Abstract : |
| PubMedSearch : Mead_2012_Stand.Genomic.Sci_6_381 |
| PubMedID: 23408395 |
| Gene_locus related to this paper: geos4-d3efm9 |
| Title : Complete genome sequence of the facultatively chemolithoautotrophic and methylotrophic alpha Proteobacterium Starkeya novella type strain (ATCC 8093(T)) - Kappler_2012_Stand.Genomic.Sci_7_44 |
| Author(s) : Kappler U , Davenport K , Beatson S , Lucas S , Lapidus A , Copeland A , Berry KW , Glavina Del Rio T , Hammon N , Dalin E , Tice H , Pitluck S , Richardson P , Bruce D , Goodwin LA , Han C , Tapia R , Detter JC , Chang YJ , Jeffries CD , Land M , Hauser L , Kyrpides NC , Goker M , Ivanova N , Klenk HP , Woyke T |
| Ref : Stand Genomic Sci , 7 :44 , 2012 |
| Abstract : |
| PubMedSearch : Kappler_2012_Stand.Genomic.Sci_7_44 |
| PubMedID: 23450099 |
| Gene_locus related to this paper: stand-d7a8r1 |
| Title : Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)) - Anderson_2012_Stand.Genomic.Sci_6_174 |
| Author(s) : Anderson I , Held B , Lapidus A , Nolan M , Lucas S , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin LA , Pitluck S , Liolios K , Mavromatis K , Pagani I , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Brambilla EM , Rohde M , Spring S , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 6 :174 , 2012 |
| Abstract : |
| PubMedSearch : Anderson_2012_Stand.Genomic.Sci_6_174 |
| PubMedID: 22768361 |
| Gene_locus related to this paper: 9bact-h1nzy5 |
| Title : Complete genome sequence of Marinomonas posidonica type strain (IVIA-Po-181(T)) - Lucas-Elio_2012_Stand.Genomic.Sci_7_31 |
| Author(s) : Lucas-Elio P , Goodwin L , Woyke T , Pitluck S , Nolan M , Kyrpides NC , Detter JC , Copeland A , Lu M , Bruce D , Detter C , Tapia R , Han S , Land ML , Ivanova N , Mikhailova N , Johnston AW , Sanchez-Amat A |
| Ref : Stand Genomic Sci , 7 :31 , 2012 |
| Abstract : |
| PubMedSearch : Lucas-Elio_2012_Stand.Genomic.Sci_7_31 |
| PubMedID: 23458837 |
| Gene_locus related to this paper: halh1-f4l1a0 , marpp-f6d018 , marpp-f6czj1 |
| Title : Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8(T)) - Anderson_2012_Stand.Genomic.Sci_7_210 |
| Author(s) : Anderson I , Munk C , Lapidus A , Nolan M , Lucas S , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin L , Pitluck S , Liolios K , Mavromatis K , Pagani I , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Rohde M , Tindall BJ , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Ivanova N |
| Ref : Stand Genomic Sci , 7 :210 , 2012 |
| Abstract : |
| PubMedSearch : Anderson_2012_Stand.Genomic.Sci_7_210 |
| PubMedID: 23408178 |
| Title : Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2 - Ahmed_2012_PLoS.One_7_e48228 |
| Author(s) : Ahmed SA , Awosika J , Baldwin C , Bishop-Lilly KA , Biswas B , Broomall S , Chain PS , Chertkov O , Chokoshvili O , Coyne S , Davenport K , Detter JC , Dorman W , Erkkila TH , Folster JP , Frey KG , George M , Gleasner C , Henry M , Hill KK , Hubbard K , Insalaco J , Johnson S , Kitzmiller A , Krepps M , Lo CC , Luu T , McNew LA , Minogue T , Munk CA , Osborne B , Patel M , Reitenga KG , Rosenzweig CN , Shea A , Shen X , Strockbine N , Tarr C , Teshima H , van Gieson E , Verratti K , Wolcott M , Xie G , Sozhamannan S , Gibbons HS |
| Ref : PLoS ONE , 7 :e48228 , 2012 |
| Abstract : |
| PubMedSearch : Ahmed_2012_PLoS.One_7_e48228 |
| PubMedID: 23133618 |
| Gene_locus related to this paper: ecoli-MCMK , ecoli-ycfp , ecoli-yqia , ecoli-YfhR |
| Title : Complete genome sequence of the rapeseed plant-growth promoting Serratia plymuthica strain AS9 - Neupane_2012_Stand.Genomic.Sci_6_54 |
| Author(s) : Neupane S , Hogberg N , Alstrom S , Lucas S , Han J , Lapidus A , Cheng JF , Bruce D , Goodwin L , Pitluck S , Peters L , Ovchinnikova G , Lu M , Han C , Detter JC , Tapia R , Fiebig A , Land M , Hauser L , Kyrpides NC , Ivanova N , Pagani I , Klenk HP , Woyke T , Finlay RD |
| Ref : Stand Genomic Sci , 6 :54 , 2012 |
| Abstract : |
| PubMedSearch : Neupane_2012_Stand.Genomic.Sci_6_54 |
| PubMedID: 22675598 |
| Gene_locus related to this paper: serpl-s0ae95 , serpl-s0aiv6 , sersa-g0bfi6 , serp5-a8gjr8 , serpl-s4yi15 |
| Title : Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T - Pester_2012_J.Bacteriol_194_6300 |
| Author(s) : Pester M , Brambilla E , Alazard D , Rattei T , Weinmaier T , Han J , Lucas S , Lapidus A , Cheng JF , Goodwin L , Pitluck S , Peters L , Ovchinnikova G , Teshima H , Detter JC , Han CS , Tapia R , Land ML , Hauser L , Kyrpides NC , Ivanova NN , Pagani I , Huntmann M , Wei CL , Davenport KW , Daligault H , Chain PS , Chen A , Mavromatis K , Markowitz V , Szeto E , Mikhailova N , Pati A , Wagner M , Woyke T , Ollivier B , Klenk HP , Spring S , Loy A |
| Ref : Journal of Bacteriology , 194 :6300 , 2012 |
| Abstract : |
| PubMedSearch : Pester_2012_J.Bacteriol_194_6300 |
| PubMedID: 23105050 |
| Gene_locus related to this paper: desaj-i4dc82 , desmd-j7j1v2 , desod-g7wg97 , desaj-i4d5q8 |
| Title : Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)) - Riedel_2012_Stand.Genomic.Sci_7_107 |
| Author(s) : Riedel T , Held B , Nolan M , Lucas S , Lapidus A , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin LA , Pitluck S , Liolios K , Mavromatis K , Pagani I , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Rohde M , Tindall BJ , Detter JC , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Woyke T |
| Ref : Stand Genomic Sci , 7 :107 , 2012 |
| Abstract : |
| PubMedSearch : Riedel_2012_Stand.Genomic.Sci_7_107 |
| PubMedID: 23450183 |
| Gene_locus related to this paper: 9flao-h2bu38 |
| Title : Complete genome sequence of Serratia plymuthica strain AS12 - Neupane_2012_Stand.Genomic.Sci_6_165 |
| Author(s) : Neupane S , Finlay RD , Alstrom S , Goodwin L , Kyrpides NC , Lucas S , Lapidus A , Bruce D , Pitluck S , Peters L , Ovchinnikova G , Chertkov O , Han J , Han C , Tapia R , Detter JC , Land M , Hauser L , Cheng JF , Ivanova N , Pagani I , Klenk HP , Woyke T , Hogberg N |
| Ref : Stand Genomic Sci , 6 :165 , 2012 |
| Abstract : |
| PubMedSearch : Neupane_2012_Stand.Genomic.Sci_6_165 |
| PubMedID: 22768360 |
| Gene_locus related to this paper: serpl-s0ae95 , serpl-s0aiv6 , sersa-g0bfi6 , serpl-i3aik7 , serpl-s4yi15 |
| Title : Complete genome sequence of the plant-associated Serratia plymuthica strain AS13 - Neupane_2012_Stand.Genomic.Sci_7_22 |
| Author(s) : Neupane S , Finlay RD , Kyrpides NC , Goodwin L , Alstrom S , Lucas S , Land M , Han J , Lapidus A , Cheng JF , Bruce D , Pitluck S , Peters L , Ovchinnikova G , Held B , Han C , Detter JC , Tapia R , Hauser L , Ivanova N , Pagani I , Woyke T , Klenk HP , Hogberg N |
| Ref : Stand Genomic Sci , 7 :22 , 2012 |
| Abstract : |
| PubMedSearch : Neupane_2012_Stand.Genomic.Sci_7_22 |
| PubMedID: 23450001 |
| Gene_locus related to this paper: serpl-s0ae95 , serpl-s0aiv6 , sersa-g0bfi6 , serp5-a8gjr8 , serpl-s4yi15 |
| Title : Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney - Copeland_2012_Stand.Genomic.Sci_6_21 |
| Author(s) : Copeland A , Gu W , Yasawong M , Lapidus A , Lucas S , Deshpande S , Pagani I , Tapia R , Cheng JF , Goodwin LA , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Pan C , Brambilla EM , Rohde M , Tindall BJ , Sikorski J , Goker M , Detter JC , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Woyke T |
| Ref : Stand Genomic Sci , 6 :21 , 2012 |
| Abstract : |
| PubMedSearch : Copeland_2012_Stand.Genomic.Sci_6_21 |
| PubMedID: 22675595 |
| Gene_locus related to this paper: marht-f2nq80 |
| Title : Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)) - Klenk_2012_Stand.Genomic.Sci_6_265 |
| Author(s) : Klenk HP , Lu M , Lucas S , Lapidus A , Copeland A , Pitluck S , Goodwin LA , Han C , Tapia R , Brambilla EM , Potter G , Land M , Ivanova N , Rohde M , Goker M , Detter JC , Li WJ , Kyrpides NC , Woyke T |
| Ref : Stand Genomic Sci , 6 :265 , 2012 |
| Abstract : |
| PubMedSearch : Klenk_2012_Stand.Genomic.Sci_6_265 |
| PubMedID: 22768369 |
| Gene_locus related to this paper: 9pseu-h5x8w4 , 9pseu-h5x5e2 , 9pseu-h5xbd6 , 9pseu-h5x783 |
| Title : Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T)) - Klenk_2012_Stand.Genomic.Sci_6_220 |
| Author(s) : Klenk HP , Held B , Lucas S , Lapidus A , Copeland A , Hammon N , Pitluck S , Goodwin LA , Han C , Tapia R , Brambilla EM , Potter G , Land M , Ivanova N , Rohde M , Goker M , Detter JC , Kyrpides NC , Woyke T |
| Ref : Stand Genomic Sci , 6 :220 , 2012 |
| Abstract : |
| PubMedSearch : Klenk_2012_Stand.Genomic.Sci_6_220 |
| PubMedID: 22768365 |
| Gene_locus related to this paper: 9pseu-h8gca1 , 9pseu-h0k1d7 , 9pseu-h0k6z7 |
| Title : Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801(T)) - Riedel_2012_Stand.Genomic.Sci_7_120 |
| Author(s) : Riedel T , Held B , Nolan M , Lucas S , Lapidus A , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Goodwin LA , Pitluck S , Liolios K , Mavromatis K , Pagani I , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Rohde M , Tindall BJ , Detter JC , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 7 :120 , 2012 |
| Abstract : |
| PubMedSearch : Riedel_2012_Stand.Genomic.Sci_7_120 |
| PubMedID: 23450211 |
| Gene_locus related to this paper: owehd-g8r0w8 |
| Title : Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1) - Mavromatis_2012_Stand.Genomic.Sci_6_210 |
| Author(s) : Mavromatis K , Chertkov O , Lapidus A , Nolan M , Lucas S , Tice H , Del Rio TG , Cheng JF , Han C , Tapia R , Bruce D , Goodwin LA , Pitluck S , Huntemann M , Liolios K , Pagani I , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Brambilla EM , Rohde M , Spring S , Goker M , Detter JC , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Woyke T |
| Ref : Stand Genomic Sci , 6 :210 , 2012 |
| Abstract : |
| PubMedSearch : Mavromatis_2012_Stand.Genomic.Sci_6_210 |
| PubMedID: 22768364 |
| Gene_locus related to this paper: sapgl-h6kz52 , 9bact-j0p3n9 |
| Title : Complete genome sequence of Tsukamurella paurometabola type strain (no. 33) - Munk_2011_Stand.Genomic.Sci_4_342 |
| Author(s) : Munk AC , Lapidus A , Lucas S , Nolan M , Tice H , Cheng JF , Del Rio TG , Goodwin L , Pitluck S , Liolios K , Huntemann M , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Tapia R , Han C , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Yasawong M , Brambilla EM , Rohde M , Sikorski J , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 4 :342 , 2011 |
| Abstract : |
| PubMedSearch : Munk_2011_Stand.Genomic.Sci_4_342 |
| PubMedID: 21886861 |
| Gene_locus related to this paper: tsupd-d5uxc3 |
| Title : Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and Rainey, 2010 - Klenk_2011_Stand.Genomic.Sci_5_121 |
| Author(s) : Klenk HP , Lapidus A , Chertkov O , Copeland A , Del Rio TG , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Han C , Bruce D , Goodwin L , Pitluck S , Pati A , Ivanova N , Mavromatis K , Daum C , Chen A , Palaniappan K , Chang YJ , Land M , Hauser L , Jeffries CD , Detter JC , Rohde M , Abt B , Pukall R , Goker M , Bristow J , Markowitz V , Hugenholtz P , Eisen JA |
| Ref : Stand Genomic Sci , 5 :121 , 2011 |
| Abstract : |
| PubMedSearch : Klenk_2011_Stand.Genomic.Sci_5_121 |
| PubMedID: 22180816 |
| Title : Complete genome sequence of Oceanithermus profundus type strain (506) - Pati_2011_Stand.Genomic.Sci_4_210 |
| Author(s) : Pati A , Zhang X , Lapidus A , Nolan M , Lucas S , Del Rio TG , Tice H , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Hauser L , Jeffries CD , Brambilla EM , Rohl A , Mwirichia R , Rohde M , Tindall BJ , Sikorski J , Wirth R , Goker M , Woyke T , Detter JC , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Land M |
| Ref : Stand Genomic Sci , 4 :210 , 2011 |
| Abstract : |
| PubMedSearch : Pati_2011_Stand.Genomic.Sci_4_210 |
| PubMedID: 21677858 |
| Gene_locus related to this paper: ocep5-e4u9z9 , ocep5-e4u767 |
| Title : Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay - Brown_2011_J.Bacteriol_193_4037 |
| Author(s) : Brown SD , Wall JD , Kucken AM , Gilmour CC , Podar M , Brandt CC , Teshima H , Detter JC , Han CS , Land ML , Lucas S , Han J , Pennacchio L , Nolan M , Pitluck S , Woyke T , Goodwin L , Palumbo AV , Elias DA |
| Ref : Journal of Bacteriology , 193 :4037 , 2011 |
| Abstract : |
| PubMedSearch : Brown_2011_J.Bacteriol_193_4037 |
| PubMedID: 21642452 |
| Gene_locus related to this paper: desaf-f3ywu6 |
| Title : Genome sequence of the mercury-methylating strain Desulfovibrio desulfuricans ND132 - Brown_2011_J.Bacteriol_193_2078 |
| Author(s) : Brown SD , Gilmour CC , Kucken AM , Wall JD , Elias DA , Brandt CC , Podar M , Chertkov O , Held B , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Woyke T , Mikhailova N , Ivanova NN , Han J , Lucas S , Lapidus AL , Land ML , Hauser LJ , Palumbo AV |
| Ref : Journal of Bacteriology , 193 :2078 , 2011 |
| Abstract : |
| PubMedSearch : Brown_2011_J.Bacteriol_193_2078 |
| PubMedID: 21357488 |
| Gene_locus related to this paper: desde-f0jku0 |
| Title : Complete genome of the cellulolytic ruminal bacterium Ruminococcus albus 7 - Suen_2011_J.Bacteriol_193_5574 |
| Author(s) : Suen G , Stevenson DM , Bruce DC , Chertkov O , Copeland A , Cheng JF , Detter C , Detter JC , Goodwin LA , Han CS , Hauser LJ , Ivanova NN , Kyrpides NC , Land ML , Lapidus A , Lucas S , Ovchinnikova G , Pitluck S , Tapia R , Woyke T , Boyum J , Mead D , Weimer PJ |
| Ref : Journal of Bacteriology , 193 :5574 , 2011 |
| Abstract : |
| PubMedSearch : Suen_2011_J.Bacteriol_193_5574 |
| PubMedID: 21914885 |
| Gene_locus related to this paper: ruma7-e6ujm0 , ruma7-e6ukm6 , rumal-a0a011v2q8 , ruma7-e6ukb2 |
| Title : Complete genome sequence of Bacteroides salanitronis type strain (BL78) - Gronow_2011_Stand.Genomic.Sci_4_191 |
| Author(s) : Gronow S , Held B , Lucas S , Lapidus A , Del Rio TG , Nolan M , Tice H , Deshpande S , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brambilla EM , Rohde M , Goker M , Detter JC , Woyke T , Bristow J , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Eisen JA |
| Ref : Stand Genomic Sci , 4 :191 , 2011 |
| Abstract : |
| PubMedSearch : Gronow_2011_Stand.Genomic.Sci_4_191 |
| PubMedID: 21677856 |
| Gene_locus related to this paper: bacsh-f0qz10 , bacsh-f0qz83 , bacsh-f0r0m7 , bacsh-f0r0s7 , bacsh-f0r5r9 , bacsh-f0r030 , bacsh-f0r440 , bacsh-f0r869 , bacsh-f0qzb0 , bacsh-f0r6i2 |
| Title : Complete genome sequence of Desulfobulbus propionicus type strain (1pr3) - Pagani_2011_Stand.Genomic.Sci_4_100 |
| Author(s) : Pagani I , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Chertkov O , Davenport K , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Mavromatis K , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brambilla E , Kannan KP , Djao OD , Rohde M , Pukall R , Spring S , Goker M , Sikorski J , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 4 :100 , 2011 |
| Abstract : |
| PubMedSearch : Pagani_2011_Stand.Genomic.Sci_4_100 |
| PubMedID: 21475592 |
| Gene_locus related to this paper: despd-e8rdj0 , despd-e8rjl1 |
| Title : Non-contiguous finished genome sequence of Bacteroides coprosuis type strain (PC139) - Land_2011_Stand.Genomic.Sci_4_233 |
| Author(s) : Land M , Held B , Gronow S , Abt B , Lucas S , Del Rio TG , Nolan M , Tice H , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Hauser L , Brambilla EM , Rohde M , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 4 :233 , 2011 |
| Abstract : |
| PubMedSearch : Land_2011_Stand.Genomic.Sci_4_233 |
| PubMedID: 21677860 |
| Gene_locus related to this paper: 9bace-f3zpr3 , 9bace-f3zre7 |
| Title : Complete genome sequence of the filamentous gliding predatory bacterium Herpetosiphon aurantiacus type strain (114-95(T)) - Kiss_2011_Stand.Genomic.Sci_5_356 |
| Author(s) : Kiss H , Nett M , Domin N , Martin K , Maresca JA , Copeland A , Lapidus A , Lucas S , Berry KW , Glavina Del Rio T , Dalin E , Tice H , Pitluck S , Richardson P , Bruce D , Goodwin L , Han C , Detter JC , Schmutz J , Brettin T , Land M , Hauser L , Kyrpides NC , Ivanova N , Goker M , Woyke T , Klenk HP , Bryant DA |
| Ref : Stand Genomic Sci , 5 :356 , 2011 |
| Abstract : |
| PubMedSearch : Kiss_2011_Stand.Genomic.Sci_5_356 |
| PubMedID: 22675585 |
| Gene_locus related to this paper: hera2-a9b061 |
| Title : Complete genome sequence of Cellulophaga algicola type strain (IC166) - Abt_2011_Stand.Genomic.Sci_4_72 |
| Author(s) : Abt B , Lu M , Misra M , Han C , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Goodwin L , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Ovchinikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brambilla E , Rohde M , Tindall BJ , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 4 :72 , 2011 |
| Abstract : |
| PubMedSearch : Abt_2011_Stand.Genomic.Sci_4_72 |
| PubMedID: 21475589 |
| Gene_locus related to this paper: celad-e6x4e5 , celad-e6x420 , celad-e6x777 , celad-e6xbe7 |
| Title : Complete genome sequence of Isosphaera pallida type strain (IS1B) - Goker_2011_Stand.Genomic.Sci_4_63 |
| Author(s) : Goker M , Cleland D , Saunders E , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Beck B , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 4 :63 , 2011 |
| Abstract : |
| PubMedSearch : Goker_2011_Stand.Genomic.Sci_4_63 |
| PubMedID: 21475588 |
| Gene_locus related to this paper: isopi-e8qx42 , isopi-e8qz61 , isopi-e8r2k6 , isopi-e8r4h2 , isopi-e8r5e4 , isopi-e8r123 , isopi-e8qz30 |
| Title : Complete genome sequence of Paludibacter propionicigenes type strain (WB4) - Gronow_2011_Stand.Genomic.Sci_4_36 |
| Author(s) : Gronow S , Munk C , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brambilla E , Rohde M , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 4 :36 , 2011 |
| Abstract : |
| PubMedSearch : Gronow_2011_Stand.Genomic.Sci_4_36 |
| PubMedID: 21475585 |
| Gene_locus related to this paper: palpw-e4t0i0 , palpw-e4t5j4 , palpw-e4t287 , palpw-e4t2d5 , palpw-e4t2d6 , palpw-e4t5h4 |
| Title : Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21) - Chang_2011_Stand.Genomic.Sci_5_97 |
| Author(s) : Chang YJ , Land M , Hauser L , Chertkov O , Del Rio TG , Nolan M , Copeland A , Tice H , Cheng JF , Lucas S , Han C , Goodwin L , Pitluck S , Ivanova N , Ovchinikova G , Pati A , Chen A , Palaniappan K , Mavromatis K , Liolios K , Brettin T , Fiebig A , Rohde M , Abt B , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 5 :97 , 2011 |
| Abstract : |
| PubMedSearch : Chang_2011_Stand.Genomic.Sci_5_97 |
| PubMedID: 22180814 |
| Gene_locus related to this paper: 9chlr-d6ttv1 , 9chlr-d6thn5 , 9chlr-d6tk73 , 9chlr-d6tzq4 , 9chlr-d6tri7 , 9chlr-d6tuz4 , 9chlr-d6tri9 , 9chlr-d6tsy5 , 9chlr-d6u5k6 , 9chlr-d6u6a8 , 9chlr-d6tye6 , 9chlr-d6tpj9 |
| Title : Complete genome sequence of Cellulophaga lytica type strain (LIM-21) - Pati_2011_Stand.Genomic.Sci_4_221 |
| Author(s) : Pati A , Abt B , Teshima H , Nolan M , Lapidus A , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Pagani I , Mavromatis K , Ovchinikova G , Chen A , Palaniappan K , Land M , Hauser L , Jeffries CD , Detter JC , Brambilla EM , Kannan KP , Rohde M , Spring S , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Ivanova N |
| Ref : Stand Genomic Sci , 4 :221 , 2011 |
| Abstract : |
| PubMedSearch : Pati_2011_Stand.Genomic.Sci_4_221 |
| PubMedID: 21677859 |
| Gene_locus related to this paper: cellc-f0re62 , cellc-f0rek7 , cellc-f0rf75 , cellc-f0rgt2 |
| Title : Complete genome sequence of Mahella australiensis type strain (50-1 BON) - Sikorski_2011_Stand.Genomic.Sci_4_331 |
| Author(s) : Sikorski J , Teshima H , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Huntemann M , Mavromatis K , Ovchinikova G , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Ngatchou-Djao OD , Rohde M , Pukall R , Spring S , Abt B , Goker M , Detter JC , Woyke T , Bristow J , Markowitz V , Hugenholtz P , Eisen JA , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 4 :331 , 2011 |
| Abstract : |
| PubMedSearch : Sikorski_2011_Stand.Genomic.Sci_4_331 |
| PubMedID: 21886860 |
| Gene_locus related to this paper: maha5-f3zvv5 |
| Title : Complete genome sequence of Leadbetterella byssophila type strain (4M15) - Abt_2011_Stand.Genomic.Sci_4_2 |
| Author(s) : Abt B , Teshima H , Lucas S , Lapidus A , Del Rio TG , Nolan M , Tice H , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Goker M , Tindall BJ , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 4 :2 , 2011 |
| Abstract : |
| PubMedSearch : Abt_2011_Stand.Genomic.Sci_4_2 |
| PubMedID: 21475582 |
| Gene_locus related to this paper: leab4-e4rqy5 , leab4-e4ru27 , leab4-e4ruf5 , leab4-e4rul3 , leab4-e4rut6 , leab4-e4rwa2 , leab4-e4rwt5 , leab4-e4rwv8 , leab4-e4ry52 , leab4-e4rzw2 |
| Title : Complete genome sequence and updated annotation of Desulfovibrio alaskensis G20 - Hauser_2011_J.Bacteriol_193_4268 |
| Author(s) : Hauser LJ , Land ML , Brown SD , Larimer F , Keller KL , Rapp-Giles BJ , Price MN , Lin M , Bruce DC , Detter JC , Tapia R , Han CS , Goodwin LA , Cheng JF , Pitluck S , Copeland A , Lucas S , Nolan M , Lapidus AL , Palumbo AV , Wall JD |
| Ref : Journal of Bacteriology , 193 :4268 , 2011 |
| Abstract : |
| PubMedSearch : Hauser_2011_J.Bacteriol_193_4268 |
| PubMedID: 21685289 |
| Gene_locus related to this paper: desag-q310n6 |
| Title : Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1) - Pitluck_2011_Stand.Genomic.Sci_4_54 |
| Author(s) : Pitluck S , Sikorski J , Zeytun A , Lapidus A , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Liolios K , Pagani I , Ivanova N , Mavromatis K , Pati A , Chen A , Palaniappan K , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brambilla E , Djao OD , Rohde M , Spring S , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Land M |
| Ref : Stand Genomic Sci , 4 :54 , 2011 |
| Abstract : |
| PubMedSearch : Pitluck_2011_Stand.Genomic.Sci_4_54 |
| PubMedID: 21475587 |
| Title : Complete genome sequence of Marivirga tractuosa type strain (H-43) - Pagani_2011_Stand.Genomic.Sci_4_154 |
| Author(s) : Pagani I , Chertkov O , Lapidus A , Lucas S , Del Rio TG , Tice H , Copeland A , Cheng JF , Nolan M , Saunders E , Pitluck S , Held B , Goodwin L , Liolios K , Ovchinikova G , Ivanova N , Mavromatis K , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Jeffries CD , Detter JC , Han C , Tapia R , Ngatchou-Djao OD , Rohde M , Goker M , Spring S , Sikorski J , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 4 :154 , 2011 |
| Abstract : |
| PubMedSearch : Pagani_2011_Stand.Genomic.Sci_4_154 |
| PubMedID: 21677852 |
| Gene_locus related to this paper: marth-e4tt12 |
| Title : Genome sequence of Pedosphaera parvula Ellin514, an aerobic Verrucomicrobial isolate from pasture soil - Kant_2011_J.Bacteriol_193_2900 |
| Author(s) : Kant R , van Passel MW , Sangwan P , Palva A , Lucas S , Copeland A , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Chertkov O , Larimer FW , Land ML , Hauser L , Brettin TS , Detter JC , Han S , de Vos WM , Janssen PH , Smidt H |
| Ref : Journal of Bacteriology , 193 :2900 , 2011 |
| Abstract : |
| PubMedSearch : Kant_2011_J.Bacteriol_193_2900 |
| PubMedID: 21460084 |
| Gene_locus related to this paper: 9bact-b9xah7.1 , 9bact-b9xah7.2 , 9bact-b9xba2 , 9bact-b9xfz4 , 9bact-b9xh19 , 9bact-b9xhn8 , 9bact-b9xj62 , 9bact-b9xjh1 , 9bact-b9xku6 , 9bact-b9xku8 , 9bact-b9xnx1 , 9bact-b9xp64 , 9bact-b9xp74 |
| Title : Genome Sequence of the ethene- and vinyl chloride-oxidizing actinomycete Nocardioides sp. strain JS614 - Coleman_2011_J.Bacteriol_193_3399 |
| Author(s) : Coleman NV , Wilson NL , Barry K , Brettin TS , Bruce DC , Copeland A , Dalin E , Detter JC , Del Rio TG , Goodwin LA , Hammon NM , Han S , Hauser LJ , Israni S , Kim E , Kyrpides N , Land ML , Lapidus A , Larimer FW , Lucas S , Pitluck S , Richardson P , Schmutz J , Tapia R , Thompson S , Tice HN , Spain JC , Gossett JG , Mattes TE |
| Ref : Journal of Bacteriology , 193 :3399 , 2011 |
| Abstract : |
| PubMedSearch : Coleman_2011_J.Bacteriol_193_3399 |
| PubMedID: 21551312 |
| Gene_locus related to this paper: nocsj-a1sil5 |
| Title : Complete genome sequences for the anaerobic, extremely thermophilic plant biomass-degrading bacteria Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor kristjanssonii, Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor owensensis, and Caldicellulosiruptor lactoaceticus - Blumer-Schuette_2011_J.Bacteriol_193_1483 |
| Author(s) : Blumer-Schuette SE , Ozdemir I , Mistry D , Lucas S , Lapidus A , Cheng JF , Goodwin LA , Pitluck S , Land ML , Hauser LJ , Woyke T , Mikhailova N , Pati A , Kyrpides NC , Ivanova N , Detter JC , Walston-Davenport K , Han S , Adams MW , Kelly RM |
| Ref : Journal of Bacteriology , 193 :1483 , 2011 |
| Abstract : |
| PubMedSearch : Blumer-Schuette_2011_J.Bacteriol_193_1483 |
| PubMedID: 21216991 |
| Gene_locus related to this paper: calki-e4s634 , calh1-e4q772 |
| Title : Genome sequence of Victivallis vadensis ATCC BAA-548, an anaerobic bacterium from the phylum Lentisphaerae, isolated from the human gastrointestinal tract - van Passel_2011_J.Bacteriol_193_2373 |
| Author(s) : van Passel MW , Kant R , Palva A , Lucas S , Copeland A , Lapidus A , Glavina Del Rio T , Dalin E , Tice H , Bruce D , Goodwin L , Pitluck S , Davenport KW , Sims D , Brettin TS , Detter JC , Han S , Larimer FW , Land ML , Hauser L , Kyrpides N , Ovchinnikova G , Richardson PP , de Vos WM , Smidt H , Zoetendal EG |
| Ref : Journal of Bacteriology , 193 :2373 , 2011 |
| Abstract : |
| PubMedSearch : van Passel_2011_J.Bacteriol_193_2373 |
| PubMedID: 21398537 |
| Gene_locus related to this paper: 9bact-d1n3e0 , 9bact-d1n3w1 , 9bact-d1n5u2 , 9bact-d1n6r9 , 9bact-d1n8l2 , 9bact-d1n8z8 , 9bact-d1n9n1 , 9bact-d1n9u1 , 9bact-d1n752 , 9bact-d1n881 , 9bact-d1naa7 , 9bact-d1nb62 , 9bact-d1nbd5 , 9bact-d1nbg1 , 9bact-d1nbh9 , 9bact-d1nbv9 |
| Title : Complete genome sequence of Bacteroides helcogenes type strain (P 36-108) - Pati_2011_Stand.Genomic.Sci_4_45 |
| Author(s) : Pati A , Gronow S , Zeytun A , Lapidus A , Nolan M , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brambilla E , Rohde M , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lucas S |
| Ref : Stand Genomic Sci , 4 :45 , 2011 |
| Abstract : |
| PubMedSearch : Pati_2011_Stand.Genomic.Sci_4_45 |
| PubMedID: 21475586 |
| Gene_locus related to this paper: bact6-e6sny5 , bact6-e6sqv4 , bact6-e6str2 , bact6-e6suh8 , bact6-e6suk4 , bact6-e6sn75 |
| Title : Complete genome sequence of Weeksella virosa type strain (9751) - Lang_2011_Stand.Genomic.Sci_4_81 |
| Author(s) : Lang E , Teshima H , Lucas S , Lapidus A , Hammon N , Deshpande S , Nolan M , Cheng JF , Pitluck S , Liolios K , Pagani I , Mikhailova N , Ivanova N , Mavromatis K , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brambilla EM , Kopitz M , Rohde M , Goker M , Tindall BJ , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 4 :81 , 2011 |
| Abstract : |
| PubMedSearch : Lang_2011_Stand.Genomic.Sci_4_81 |
| PubMedID: 21475590 |
| Gene_locus related to this paper: weevc-f0nz59 , weevc-f0p0t6 , weevc-f0p2m6 , weevc-f0p272 , weevc-f0nzv7 , weevc-f0p2m3 |
| Title : Complete genome sequence of Methanothermus fervidus type strain (V24S) - Anderson_2010_Stand.Genomic.Sci_3_315 |
| Author(s) : Anderson I , Djao OD , Misra M , Chertkov O , Nolan M , Lucas S , Lapidus A , Del Rio TG , Tice H , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Brambilla E , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Sikorski J , Spring S , Rohde M , Eichinger K , Huber H , Wirth R , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 3 :315 , 2010 |
| Abstract : |
| PubMedSearch : Anderson_2010_Stand.Genomic.Sci_3_315 |
| PubMedID: 21304736 |
| Title : Complete genome sequence of Sulfurimonas autotrophica type strain (OK10) - Sikorski_2010_Stand.Genomic.Sci_3_194 |
| Author(s) : Sikorski J , Munk C , Lapidus A , Ngatchou Djao OD , Lucas S , Glavina Del Rio T , Nolan M , Tice H , Han C , Cheng JF , Tapia R , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Sims D , Meincke L , Brettin T , Detter JC , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Lang E , Spring S , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 3 :194 , 2010 |
| Abstract : |
| PubMedSearch : Sikorski_2010_Stand.Genomic.Sci_3_194 |
| PubMedID: 21304749 |
| Gene_locus related to this paper: sulao-e0up24 , sulao-e0ute6 , sulao-metxa |
| Title : Complete genome sequence of Conexibacter woesei type strain (ID131577) - Pukall_2010_Stand.Genomic.Sci_2_212 |
| Author(s) : Pukall R , Lapidus A , Glavina Del Rio T , Copeland A , Tice H , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Mavromatis K , Ivanova N , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Meincke L , Sims D , Brettin T , Detter JC , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Kyrpides NC , Klenk HP , Hugenholtz P |
| Ref : Stand Genomic Sci , 2 :212 , 2010 |
| Abstract : |
| PubMedSearch : Pukall_2010_Stand.Genomic.Sci_2_212 |
| PubMedID: 21304704 |
| Gene_locus related to this paper: conwi-d3fc89 |
| Title : Complete genome sequence of Aminobacterium colombiense type strain (ALA-1) - Chertkov_2010_Stand.Genomic.Sci_2_280 |
| Author(s) : Chertkov O , Sikorski J , Brambilla E , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Tice H , Cheng JF , Han C , Detter JC , Bruce D , Tapia R , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Spring S , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :280 , 2010 |
| Abstract : |
| PubMedSearch : Chertkov_2010_Stand.Genomic.Sci_2_280 |
| PubMedID: 21304712 |
| Title : Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07) - Foster_2010_Stand.Genomic.Sci_2_1 |
| Author(s) : Foster B , Pukall R , Abt B , Nolan M , Glavina Del Rio T , Chen F , Lucas S , Tice H , Pitluck S , Cheng JF , Chertkov O , Brettin T , Han C , Detter JC , Bruce D , Goodwin L , Ivanova N , Mavromatis K , Pati A , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 2 :1 , 2010 |
| Abstract : |
| PubMedSearch : Foster_2010_Stand.Genomic.Sci_2_1 |
| PubMedID: 21304672 |
| Title : Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1) - Goker_2010_Stand.Genomic.Sci_3_66 |
| Author(s) : Goker M , Held B , Lapidus A , Nolan M , Spring S , Yasawong M , Lucas S , Glavina Del Rio T , Tice H , Cheng JF , Goodwin L , Tapia R , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Brambilla E , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Detter JC , Han C , Rohde M , Sikorski J , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 3 :66 , 2010 |
| Abstract : |
| PubMedSearch : Goker_2010_Stand.Genomic.Sci_3_66 |
| PubMedID: 21304693 |
| Title : Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA) - Mavromatis_2010_Stand.Genomic.Sci_2_9 |
| Author(s) : Mavromatis K , Sikorski J , Lapidus A , Glavina Del Rio T , Copeland A , Tice H , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Meincke L , Sims D , Chertkov O , Han C , Brettin T , Detter JC , Wahrenburg C , Rohde M , Pukall R , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 2 :9 , 2010 |
| Abstract : |
| PubMedSearch : Mavromatis_2010_Stand.Genomic.Sci_2_9 |
| PubMedID: 21304673 |
| Title : Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1) - Djao_2010_Stand.Genomic.Sci_3_268 |
| Author(s) : Djao OD , Zhang X , Lucas S , Lapidus A , Del Rio TG , Nolan M , Tice H , Cheng JF , Han C , Tapia R , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Ovchinnikova G , Pati A , Brambilla E , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Sikorski J , Spring S , Goker M , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 3 :268 , 2010 |
| Abstract : |
| PubMedSearch : Djao_2010_Stand.Genomic.Sci_3_268 |
| PubMedID: 21304731 |
| Gene_locus related to this paper: synlt-d7cpg4 |
| Title : Complete genome sequence of Archaeoglobus profundus type strain (AV18) - von Jan_2010_Stand.Genomic.Sci_2_327 |
| Author(s) : von Jan M , Lapidus A , Del Rio TG , Copeland A , Tice H , Cheng JF , Lucas S , Chen F , Nolan M , Goodwin L , Han C , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Ovchinnikova G , Chertkov O , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Saunders E , Brettin T , Detter JC , Chain P , Eichinger K , Huber H , Spring S , Rohde M , Goker M , Wirth R , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :327 , 2010 |
| Abstract : |
| PubMedSearch : von Jan_2010_Stand.Genomic.Sci_2_327 |
| PubMedID: 21304717 |
| Title : Complete genome sequence of Thermaerobacter marianensis type strain (7p75a) - Han_2010_Stand.Genomic.Sci_3_337 |
| Author(s) : Han C , Gu W , Zhang X , Lapidus A , Nolan M , Copeland A , Lucas S , Del Rio TG , Tice H , Cheng JF , Tapia R , Goodwin L , Pitluck S , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Schneider S , Rohde M , Goker M , Pukall R , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Detter JC |
| Ref : Stand Genomic Sci , 3 :337 , 2010 |
| Abstract : |
| PubMedSearch : Han_2010_Stand.Genomic.Sci_3_337 |
| PubMedID: 21304738 |
| Gene_locus related to this paper: them7-e6sh68 , them7-e6shq4 , them7-e6shv1 |
| Title : Genome sequence of the dioxin-mineralizing bacterium Sphingomonas wittichii RW1 - Miller_2010_J.Bacteriol_192_6101 |
| Author(s) : Miller TR , Delcher AL , Salzberg SL , Saunders E , Detter JC , Halden RU |
| Ref : Journal of Bacteriology , 192 :6101 , 2010 |
| Abstract : |
| PubMedSearch : Miller_2010_J.Bacteriol_192_6101 |
| PubMedID: 20833805 |
| Gene_locus related to this paper: 9sphn-a0a0f5pa67 , sphww-a5ve07 |
| Title : Complete genome sequence of Spirochaeta smaragdinae type strain (SEBR 4228) - Mavromatis_2010_Stand.Genomic.Sci_3_136 |
| Author(s) : Mavromatis K , Yasawong M , Chertkov O , Lapidus A , Lucas S , Nolan M , Del Rio TG , Tice H , Cheng JF , Pitluck S , Liolios K , Ivanova N , Tapia R , Han C , Bruce D , Goodwin L , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Rohde M , Brambilla E , Spring S , Goker M , Sikorski J , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 3 :136 , 2010 |
| Abstract : |
| PubMedSearch : Mavromatis_2010_Stand.Genomic.Sci_3_136 |
| PubMedID: 21304743 |
| Gene_locus related to this paper: spiss-e1r584 , spiss-e1rce8 |
| Title : Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460) - Kiss_2010_Stand.Genomic.Sci_2_270 |
| Author(s) : Kiss H , Lang E , Lapidus A , Copeland A , Nolan M , Glavina Del Rio T , Chen F , Lucas S , Tice H , Cheng JF , Han C , Goodwin L , Pitluck S , Liolios K , Pati A , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brettin T , Spring S , Rohde M , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :270 , 2010 |
| Abstract : |
| PubMedSearch : Kiss_2010_Stand.Genomic.Sci_2_270 |
| PubMedID: 21304711 |
| Gene_locus related to this paper: dena2-d4h2g2 , dena2-d4h260 |
| Title : Complete genome sequence of Desulfarculus baarsii type strain (2st14) - Sun_2010_Stand.Genomic.Sci_3_276 |
| Author(s) : Sun H , Spring S , Lapidus A , Davenport K , Del Rio TG , Tice H , Nolan M , Copeland A , Cheng JF , Lucas S , Tapia R , Goodwin L , Pitluck S , Ivanova N , Pagani I , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Hauser L , Chang YJ , Jeffries CD , Detter JC , Han C , Rohde M , Brambilla E , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Land M |
| Ref : Stand Genomic Sci , 3 :276 , 2010 |
| Abstract : |
| PubMedSearch : Sun_2010_Stand.Genomic.Sci_3_276 |
| PubMedID: 21304732 |
| Gene_locus related to this paper: desb2-e1qfv0 , desb2-e1qiq4 , desb2-e1qd85 |
| Title : Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24) - Mavromatis_2010_Stand.Genomic.Sci_2_290 |
| Author(s) : Mavromatis K , Abt B , Brambilla E , Lapidus A , Copeland A , Deshpande S , Nolan M , Lucas S , Tice H , Cheng JF , Han C , Detter JC , Woyke T , Goodwin L , Pitluck S , Held B , Brettin T , Tapia R , Ivanova N , Mikhailova N , Pati A , Liolios K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 2 :290 , 2010 |
| Abstract : |
| PubMedSearch : Mavromatis_2010_Stand.Genomic.Sci_2_290 |
| PubMedID: 21304713 |
| Gene_locus related to this paper: corad-d5ehl2 , corad-d5ene2 , corad-d5epb6 , corad-d5epc2 , corad-d5epz5 |
| Title : Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1) - Kiss_2010_Stand.Genomic.Sci_3_153 |
| Author(s) : Kiss H , Cleland D , Lapidus A , Lucas S , Del Rio TG , Nolan M , Tice H , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Lu M , Brettin T , Detter JC , Goker M , Tindall BJ , Beck B , McDermott TR , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Cheng JF |
| Ref : Stand Genomic Sci , 3 :153 , 2010 |
| Abstract : |
| PubMedSearch : Kiss_2010_Stand.Genomic.Sci_3_153 |
| PubMedID: 21304745 |
| Gene_locus related to this paper: thet1-d1cbe2 , thet1-d1cbh1 , thet1-d1cbh5 , thet1-d1cdw7 , thet1-d1cej0 , thet1-d1cfr4 , thet1-d1chv7 , thet1-d1cih9 |
| Title : Complete genome sequence of Haliangium ochraceum type strain (SMP-2) - Ivanova_2010_Stand.Genomic.Sci_2_96 |
| Author(s) : Ivanova N , Daum C , Lang E , Abt B , Kopitz M , Saunders E , Lapidus A , Lucas S , Glavina Del Rio T , Nolan M , Tice H , Copeland A , Cheng JF , Chen F , Bruce D , Goodwin L , Pitluck S , Mavromatis K , Pati A , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Brettin T , Rohde M , Goker M , Bristow J , Markowitz V , Eisen JA , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :96 , 2010 |
| Abstract : |
| PubMedSearch : Ivanova_2010_Stand.Genomic.Sci_2_96 |
| PubMedID: 21304682 |
| Gene_locus related to this paper: halo1-d0lid9 , halo1-d0lm49 , halo1-d0lrn3 , halo1-d0ljm2 |
| Title : Complete genome sequence of Olsenella uli type strain (VPI D76D-27C) - Goker_2010_Stand.Genomic.Sci_3_76 |
| Author(s) : Goker M , Held B , Lucas S , Nolan M , Yasawong M , Glavina Del Rio T , Tice H , Cheng JF , Bruce D , Detter JC , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Sikorski J , Pukall R , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 3 :76 , 2010 |
| Abstract : |
| PubMedSearch : Goker_2010_Stand.Genomic.Sci_3_76 |
| PubMedID: 21304694 |
| Gene_locus related to this paper: olsuv-e1qw86 , olsuv-e1qw87 , olsuv-e1qz20 , olsuv-e1qwd9 |
| Title : Complete genome sequence of Haloterrigena turkmenica type strain (4k) - Saunders_2010_Stand.Genomic.Sci_2_107 |
| Author(s) : Saunders E , Tindall BJ , Fahnrich R , Lapidus A , Copeland A , Del Rio TG , Lucas S , Chen F , Tice H , Cheng JF , Han C , Detter JC , Bruce D , Goodwin L , Chain P , Pitluck S , Pati A , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 2 :107 , 2010 |
| Abstract : |
| PubMedSearch : Saunders_2010_Stand.Genomic.Sci_2_107 |
| PubMedID: 21304683 |
| Gene_locus related to this paper: halsp-YUXL , haltv-d2rs70 , haltv-d2rtx9 , haltv-d2rwf4 , haltv-d2rwl5 , haltv-d2rxg6 , haltv-d2rxv9 , haltv-d2ry22 , haltv-d2rzg9 , haltv-d2rzl4 , haltv-d2s3c9 |
| Title : Complete genome sequence of Arcobacter nitrofigilis type strain (CI) - Pati_2010_Stand.Genomic.Sci_2_300 |
| Author(s) : Pati A , Gronow S , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Tice H , Cheng JF , Han C , Chertkov O , Bruce D , Tapia R , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Detter JC , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 2 :300 , 2010 |
| Abstract : |
| PubMedSearch : Pati_2010_Stand.Genomic.Sci_2_300 |
| PubMedID: 21304714 |
| Gene_locus related to this paper: arcnc-d5v0e6 , arcnc-d5v643 |
| Title : Complete genome sequence of Thermocrinis albus type strain (HI 11\/12) - Wirth_2010_Stand.Genomic.Sci_2_194 |
| Author(s) : Wirth R , Sikorski J , Brambilla E , Misra M , Lapidus A , Copeland A , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Han C , Detter JC , Tapia R , Bruce D , Goodwin L , Pitluck S , Pati A , Anderson I , Ivanova N , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Bilek Y , Hader T , Land M , Hauser L , Chang YJ , Jeffries CD , Tindall BJ , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :194 , 2010 |
| Abstract : |
| PubMedSearch : Wirth_2010_Stand.Genomic.Sci_2_194 |
| PubMedID: 21304702 |
| Gene_locus related to this paper: theah-d3smz6 |
| Title : Comparative genomics of clinical and environmental Vibrio mimicus - Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| Author(s) : Hasan NA , Grim CJ , Haley BJ , Chun J , Alam M , Taviani E , Hoq M , Munk AC , Saunders E , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Xie G , Nair GB , Huq A , Colwell RR |
| Ref : Proc Natl Acad Sci U S A , 107 :21134 , 2010 |
| Abstract : |
| PubMedSearch : Hasan_2010_Proc.Natl.Acad.Sci.U.S.A_107_21134 |
| PubMedID: 21078967 |
| Gene_locus related to this paper: vibch-VC2610 , vibch-VC2718 , vibch-VCA0688 , vibch-y1892 , vibch-y2276 , vibmi-d0gt41 , vibmi-u4zh77 |
| Title : Complete genome sequence of Ferrimonas balearica type strain (PAT) - Nolan_2010_Stand.Genomic.Sci_3_174 |
| Author(s) : Nolan M , Sikorski J , Davenport K , Lucas S , Del Rio TG , Tice H , Cheng JF , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Tapia R , Brettin T , Detter JC , Han C , Yasawong M , Rohde M , Tindall BJ , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 3 :174 , 2010 |
| Abstract : |
| PubMedSearch : Nolan_2010_Stand.Genomic.Sci_3_174 |
| PubMedID: 21304747 |
| Gene_locus related to this paper: ferbd-e1slj2 , ferbd-e1sm86 , ferbd-e1sm96 , ferbd-e1sr13 , ferbd-e1sv19 , ferbd-e1sva3 , ferbd-e1swh8 , ferbd-e1ss88 , ferbd-e1swm0 , ferbd-e1snp4 |
| Title : Complete genome sequence of Thermosphaera aggregans type strain (M11TL) - Spring_2010_Stand.Genomic.Sci_2_245 |
| Author(s) : Spring S , Rachel R , Lapidus A , Davenport K , Tice H , Copeland A , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CC , Brettin T , Detter JC , Tapia R , Han C , Heimerl T , Weikl F , Brambilla E , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :245 , 2010 |
| Abstract : |
| PubMedSearch : Spring_2010_Stand.Genomic.Sci_2_245 |
| PubMedID: 21304709 |
| Gene_locus related to this paper: theam-d5u0z4 |
| Title : Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)) - Spring_2010_Stand.Genomic.Sci_2_38 |
| Author(s) : Spring S , Nolan M , Lapidus A , Glavina Del Rio T , Copeland A , Tice H , Cheng JF , Lucas S , Land M , Chen F , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Hauser L , Chang YJ , Jeffries CD , Munk C , Kiss H , Chain P , Han C , Brettin T , Detter JC , Schuler E , Goker M , Rohde M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :38 , 2010 |
| Abstract : |
| PubMedSearch : Spring_2010_Stand.Genomic.Sci_2_38 |
| PubMedID: 21304676 |
| Gene_locus related to this paper: sphtd-d1c5v2 |
| Title : Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300) - Harmon-Smith_2010_Stand.Genomic.Sci_2_220 |
| Author(s) : Harmon-Smith M , Celia L , Chertkov O , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Tice H , Cheng JF , Han C , Detter JC , Bruce D , Goodwin L , Pitluck S , Pati A , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Goker M , Beck B , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Chen F |
| Ref : Stand Genomic Sci , 2 :220 , 2010 |
| Abstract : |
| PubMedSearch : Harmon-Smith_2010_Stand.Genomic.Sci_2_220 |
| PubMedID: 21304705 |
| Gene_locus related to this paper: sebte-d1am65 |
| Title : Complete genome sequence of Gordonia bronchialis type strain (3410) - Ivanova_2010_Stand.Genomic.Sci_2_19 |
| Author(s) : Ivanova N , Sikorski J , Jando M , Lapidus A , Nolan M , Lucas S , Del Rio TG , Tice H , Copeland A , Cheng JF , Chen F , Bruce D , Goodwin L , Pitluck S , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Saunders E , Han C , Detter JC , Brettin T , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 2 :19 , 2010 |
| Abstract : |
| PubMedSearch : Ivanova_2010_Stand.Genomic.Sci_2_19 |
| PubMedID: 21304674 |
| Gene_locus related to this paper: gorb4-d0lfd8 |
| Title : Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034) - Glavina_2010_Stand.Genomic.Sci_2_87 |
| Author(s) : Glavina Del Rio T , Abt B , Spring S , Lapidus A , Nolan M , Tice H , Copeland A , Cheng JF , Chen F , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Saunders E , Detter JC , Brettin T , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lucas S |
| Ref : Stand Genomic Sci , 2 :87 , 2010 |
| Abstract : |
| PubMedSearch : Glavina_2010_Stand.Genomic.Sci_2_87 |
| PubMedID: 21304681 |
| Gene_locus related to this paper: chipd-c7pkc8 |
| Title : Complete genome sequence of Brachyspira murdochii type strain (56-150) - Pati_2010_Stand.Genomic.Sci_2_260 |
| Author(s) : Pati A , Sikorski J , Gronow S , Munk C , Lapidus A , Copeland A , Glavina Del Tio T , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Han C , Detter JC , Bruce D , Tapia R , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Spring S , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 2 :260 , 2010 |
| Abstract : |
| PubMedSearch : Pati_2010_Stand.Genomic.Sci_2_260 |
| PubMedID: 21304710 |
| Gene_locus related to this paper: bram5-d5u3y5 , bram5-d5u7a7 , bram5-d5u9f8 , bram5-d5ua75 , bram5-d5u886 |
| Title : Complete genome sequence of the cellulolytic thermophile Caldicellulosiruptor obsidiansis OB47T - Elkins_2010_J.Bacteriol_192_6099 |
| Author(s) : Elkins JG , Lochner A , Hamilton-Brehm SD , Davenport KW , Podar M , Brown SD , Land ML , Hauser LJ , Klingeman DM , Raman B , Goodwin LA , Tapia R , Meincke LJ , Detter JC , Bruce DC , Han CS , Palumbo AV , Cottingham RW , Keller M , Graham DE |
| Ref : Journal of Bacteriology , 192 :6099 , 2010 |
| Abstract : |
| PubMedSearch : Elkins_2010_J.Bacteriol_192_6099 |
| PubMedID: 20851897 |
| Gene_locus related to this paper: caloo-d9tg02 |
| Title : Complete genome sequence of Acidaminococcus fermentans type strain (VR4) - Chang_2010_Stand.Genomic.Sci_3_1 |
| Author(s) : Chang YJ , Pukall R , Saunders E , Lapidus A , Copeland A , Nolan M , Glavina Del Rio T , Lucas S , Chen F , Tice H , Cheng JF , Han C , Detter JC , Bruce D , Goodwin L , Pitluck S , Mikhailova N , Liolios K , Pati A , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Jeffries CD , Brettin T , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 3 :1 , 2010 |
| Abstract : |
| PubMedSearch : Chang_2010_Stand.Genomic.Sci_3_1 |
| PubMedID: 21304687 |
| Gene_locus related to this paper: acifv-d2rju3 , acifv-d2rk38 , acifv-d2rmp3 |
| Title : Complete genome sequence of Cryptobacterium curtum type strain (12-3) - Mavrommatis_2009_Stand.Genomic.Sci_1_93 |
| Author(s) : Mavrommatis K , Pukall R , Rohde C , Chen F , Sims D , Brettin T , Kuske C , Detter JC , Han C , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Tice H , Cheng JF , Bruce D , Goodwin L , Pitluck S , Ovchinnikova G , Pati A , Ivanova N , Chen A , Palaniappan K , Chain P , D'Haeseleer P , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Rohde M , Klenk HP , Kyrpides NC |
| Ref : Stand Genomic Sci , 1 :93 , 2009 |
| Abstract : |
| PubMedSearch : Mavrommatis_2009_Stand.Genomic.Sci_1_93 |
| PubMedID: 21304644 |
| Title : Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845) - Mavrommatis_2009_Stand.Genomic.Sci_1_101 |
| Author(s) : Mavrommatis K , Gronow S , Saunders E , Land M , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Bruce D , Goodwin L , Pitluck S , Pati A , Ivanova N , Chen A , Palaniappan K , Chain P , Hauser L , Chang YJ , Jeffries CD , Brettin T , Detter JC , Han C , Bristow J , Goker M , Rohde M , Eisen JA , Markowitz V , Kyrpides NC , Klenk HP , Hugenholtz P |
| Ref : Stand Genomic Sci , 1 :101 , 2009 |
| Abstract : |
| PubMedSearch : Mavrommatis_2009_Stand.Genomic.Sci_1_101 |
| PubMedID: 21304645 |
| Gene_locus related to this paper: capgi-c2m6q0 , capod-c7m434 , capod-c7m7m0 , capod-c7m8e1 , capod-c7m590 , capoc-e4mus7 |
| Title : Complete genome sequence of Pirellula staleyi type strain (ATCC 27377) - Clum_2009_Stand.Genomic.Sci_1_308 |
| Author(s) : Clum A , Tindall BJ , Sikorski J , Ivanova N , Mavrommatis K , Lucas S , Glavina T , Del R , Nolan M , Chen F , Tice H , Pitluck S , Cheng JF , Chertkov O , Brettin T , Han C , Detter JC , Kuske C , Bruce D , Goodwin L , Ovchinikova G , Pati A , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 1 :308 , 2009 |
| Abstract : |
| PubMedSearch : Clum_2009_Stand.Genomic.Sci_1_308 |
| PubMedID: 21304671 |
| Gene_locus related to this paper: pirsd-d2qwf7 , pirsd-d2qya4 , pirsd-d2qyh4 , pirsd-d2qyx7 , pirsd-d2r0n7 , pirsd-d2r1w6 , pirsd-d2r2c5 , pirsd-d2r2f7 , pirsd-d2r3w0 , pirsd-d2r4c3 , pirsd-d2r5t1 , pirsd-d2r9d5 , pirsd-d2r496 , pirsd-d2r881 , pirsd-d2r024 |
| Title : Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575) - Spring_2009_Stand.Genomic.Sci_1_242 |
| Author(s) : Spring S , Lapidus A , Schroder M , Gleim D , Sims D , Meincke L , Glavina Del Rio T , Tice H , Copeland A , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Saunders E , Brettin T , Detter JC , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Han C |
| Ref : Stand Genomic Sci , 1 :242 , 2009 |
| Abstract : |
| PubMedSearch : Spring_2009_Stand.Genomic.Sci_1_242 |
| PubMedID: 21304664 |
| Gene_locus related to this paper: desas-c8vw82 , desas-c8vxd2 |
| Title : Complete genome sequence of Atopobium parvulum type strain (IPP 1246) - Copeland_2009_Stand.Genomic.Sci_1_166 |
| Author(s) : Copeland A , Sikorski J , Lapidus A , Nolan M , Del Rio TG , Lucas S , Chen F , Tice H , Pitluck S , Cheng JF , Pukall R , Chertkov O , Brettin T , Han C , Detter JC , Kuske C , Bruce D , Goodwin L , Ivanova N , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Chain P , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 1 :166 , 2009 |
| Abstract : |
| PubMedSearch : Copeland_2009_Stand.Genomic.Sci_1_166 |
| PubMedID: 21304653 |
| Gene_locus related to this paper: atopd-c8w7b9 , atopd-c8w7c0 , atopd-c8w7k9 , atopd-c8w886 |
| Title : Complete genome sequence of Desulfomicrobium baculatum type strain (X) - Copeland_2009_Stand.Genomic.Sci_1_29 |
| Author(s) : Copeland A , Spring S , Goker M , Schneider S , Lapidus A , Del Rio TG , Tice H , Cheng JF , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavrommatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CC , Meincke L , Sims D , Brettin T , Detter JC , Han C , Chain P , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lucas S |
| Ref : Stand Genomic Sci , 1 :29 , 2009 |
| Abstract : |
| PubMedSearch : Copeland_2009_Stand.Genomic.Sci_1_29 |
| PubMedID: 21304634 |
| Gene_locus related to this paper: desbd-c7ln23 , desbd-c7lrc0 , desbd-c7lw38 , desbd-c7ls17 |
| Title : Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1 - Anderson_2009_Stand.Genomic.Sci_1_189 |
| Author(s) : Anderson IJ , Sieprawska-Lupa M , Lapidus A , Nolan M , Copeland A , Glavina Del Rio T , Tice H , Dalin E , Barry K , Saunders E , Han C , Brettin T , Detter JC , Bruce D , Mikhailova N , Pitluck S , Hauser L , Land M , Lucas S , Richardson P , Whitman WB , Kyrpides NC |
| Ref : Stand Genomic Sci , 1 :189 , 2009 |
| Abstract : |
| PubMedSearch : Anderson_2009_Stand.Genomic.Sci_1_189 |
| PubMedID: 21304656 |
| Title : Complete genome sequence of Anaerococcus prevotii type strain (PC1) - Labutti_2009_Stand.Genomic.Sci_1_159 |
| Author(s) : LaButti K , Pukall R , Steenblock K , Glavina Del Rio T , Tice H , Copeland A , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Saunders E , Brettin T , Detter JC , Han C , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Lapidus A |
| Ref : Stand Genomic Sci , 1 :159 , 2009 |
| Abstract : |
| PubMedSearch : Labutti_2009_Stand.Genomic.Sci_1_159 |
| PubMedID: 21304652 |
| Gene_locus related to this paper: anapd-c7ri43 |
| Title : Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134) - Pukall_2009_Stand.Genomic.Sci_1_262 |
| Author(s) : Pukall R , Gehrich-Schroter G , Lapidus A , Nolan M , Glavina Del Rio T , Lucas S , Chen F , Tice H , Pitluck S , Cheng JF , Copeland A , Saunders E , Brettin T , Detter JC , Bruce D , Goodwin L , Pati A , Ivanova N , Mavromatis K , Ovchinnikova G , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Han C |
| Ref : Stand Genomic Sci , 1 :262 , 2009 |
| Abstract : |
| PubMedSearch : Pukall_2009_Stand.Genomic.Sci_1_262 |
| PubMedID: 21304666 |
| Gene_locus related to this paper: jondd-c7qz27 , jondd-c7qza6 , jondd-c7r0s6 , jondd-c7r2p4 , jondd-c7r2s4 , jondd-c7r5f7 , jondd-c7r044 , jondd-c7r128 , jondd-c7r357 |
| Title : Complete genome sequence of Halomicrobium mukohataei type strain (arg-2) - Tindall_2009_Stand.Genomic.Sci_1_270 |
| Author(s) : Tindall BJ , Schneider S , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Saunders E , Bruce D , Goodwin L , Pitluck S , Mikhailova N , Pati A , Ivanova N , Mavrommatis K , Chen A , Palaniappan K , Chain P , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Han C , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC , Detter JC |
| Ref : Stand Genomic Sci , 1 :270 , 2009 |
| Abstract : |
| PubMedSearch : Tindall_2009_Stand.Genomic.Sci_1_270 |
| PubMedID: 21304667 |
| Gene_locus related to this paper: halmd-c7nwe5 , halmd-c7nwh2 , halmd-c7p0c0 , halmd-c7p2d1 , halmd-c7p3m9 |
| Title : Complete genome sequence of Kangiella koreensis type strain (SW-125) - Han_2009_Stand.Genomic.Sci_1_226 |
| Author(s) : Han C , Sikorski J , Lapidus A , Nolan M , Glavina Del Rio T , Tice H , Cheng JF , Lucas S , Chen F , Copeland A , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Bruce D , Goodwin L , Pitluck S , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Saunders E , Brettin T , Goker M , Tindall BJ , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Detter JC |
| Ref : Stand Genomic Sci , 1 :226 , 2009 |
| Abstract : |
| PubMedSearch : Han_2009_Stand.Genomic.Sci_1_226 |
| PubMedID: 21304661 |
| Gene_locus related to this paper: kankd-c7r7f7 , kankd-c7r7w2 , kankd-c7r8t4 , kankd-c7r9y8 , kankd-c7r701 , kankd-c7r727 , kankd-c7r779 , kankd-c7r785 , kankd-c7ra17 , kankd-c7rc78 |
| Title : Comparative genomics reveals mechanism for short-term and long-term clonal transitions in pandemic Vibrio cholerae - Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| Author(s) : Chun J , Grim CJ , Hasan NA , Lee JH , Choi SY , Haley BJ , Taviani E , Jeon YS , Kim DW , Brettin TS , Bruce DC , Challacombe JF , Detter JC , Han CS , Munk AC , Chertkov O , Meincke L , Saunders E , Walters RA , Huq A , Nair GB , Colwell RR |
| Ref : Proc Natl Acad Sci U S A , 106 :15442 , 2009 |
| Abstract : |
| PubMedSearch : Chun_2009_Proc.Natl.Acad.Sci.U.S.A_106_15442 |
| PubMedID: 19720995 |
| Gene_locus related to this paper: vibch-lipas , vibch-VC0135 , vibch-VC1418 , vibch-VC1974 , vibch-VC2432 , vibch-VC2718 , vibch-VCA0063 , vibch-VCA0490 , vibch-VCA0688 , vibch-VCA0754 , vibch-y1892 , vibch-y2276 |
| Title : Complete genome sequence of Halorhabdus utahensis type strain (AX-2) - Anderson_2009_Stand.Genomic.Sci_1_218 |
| Author(s) : Anderson I , Tindall BJ , Pomrenke H , Goker M , Lapidus A , Nolan M , Copeland A , Glavina Del Rio T , Chen F , Tice H , Cheng JF , Lucas S , Chertkov O , Bruce D , Brettin T , Detter JC , Han C , Goodwin L , Land M , Hauser L , Chang YJ , Jeffries CD , Pitluck S , Pati A , Mavromatis K , Ivanova N , Ovchinnikova G , Chen A , Palaniappan K , Chain P , Rohde M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 1 :218 , 2009 |
| Abstract : |
| PubMedSearch : Anderson_2009_Stand.Genomic.Sci_1_218 |
| PubMedID: 21304660 |
| Gene_locus related to this paper: halud-c7npq6 , halud-c7npw0 , halud-c7nsl4 , halud-c7nut6 , halud-c7npw2 |
| Title : Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255) - Saunders_2009_Stand.Genomic.Sci_1_174 |
| Author(s) : Saunders E , Pukall R , Abt B , Lapidus A , Glavina Del Rio T , Copeland A , Tice H , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Ovchinnikova G , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Meincke L , Sims D , Brettin T , Detter JC , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Han C |
| Ref : Stand Genomic Sci , 1 :174 , 2009 |
| Abstract : |
| PubMedSearch : Saunders_2009_Stand.Genomic.Sci_1_174 |
| PubMedID: 21304654 |
| Gene_locus related to this paper: eggle-c8wmc6 , eggle-c8wpb6 |
| Title : Complete genome sequence of Streptobacillus moniliformis type strain (9901) - Nolan_2009_Stand.Genomic.Sci_1_300 |
| Author(s) : Nolan M , Gronow S , Lapidus A , Ivanova N , Copeland A , Lucas S , Del Rio TG , Chen F , Tice H , Pitluck S , Cheng JF , Sims D , Meincke L , Bruce D , Goodwin L , Brettin T , Han C , Detter JC , Ovchinikova G , Pati A , Mavromatis K , Mikhailova N , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Sproer C , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Chain P |
| Ref : Stand Genomic Sci , 1 :300 , 2009 |
| Abstract : |
| PubMedSearch : Nolan_2009_Stand.Genomic.Sci_1_300 |
| PubMedID: 21304670 |
| Gene_locus related to this paper: strm9-d1ayq9 , strm9-d1avt1 |
| Title : Complete genome sequence of Leptotrichia buccalis type strain (C-1013-b) - Ivanova_2009_Stand.Genomic.Sci_1_126 |
| Author(s) : Ivanova N , Gronow S , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Saunders E , Bruce D , Goodwin L , Brettin T , Detter JC , Han C , Pitluck S , Mikhailova N , Pati A , Mavrommatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Chain P , Rohde C , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 1 :126 , 2009 |
| Abstract : |
| PubMedSearch : Ivanova_2009_Stand.Genomic.Sci_1_126 |
| PubMedID: 21304648 |
| Gene_locus related to this paper: lepbd-c7naa9 , lepbd-c7nay1 , lepbd-c7ncm7 |
| Title : Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3) - Han_2009_Stand.Genomic.Sci_1_54 |
| Author(s) : Han C , Spring S , Lapidus A , Del Rio TG , Tice H , Copeland A , Cheng JF , Lucas S , Chen F , Nolan M , Bruce D , Goodwin L , Pitluck S , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CC , Saunders E , Chertkov O , Brettin T , Goker M , Rohde M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Detter JC |
| Ref : Stand Genomic Sci , 1 :54 , 2009 |
| Abstract : |
| PubMedSearch : Han_2009_Stand.Genomic.Sci_1_54 |
| PubMedID: 21304637 |
| Gene_locus related to this paper: pedhd-c6xsb2 , pedhd-c6xtc2 , pedhd-c6xtt3 , pedhd-c6xwf3 , pedhd-c6xzk8 , pedhd-c6y3i4 , pedhd-c6y3z2 , pedhd-c6y041 , pedhd-c6y150 , pedhd-c6xze4 , pedhd-c6xze5 , pedhd-c6y111 |
| Title : Complete genome sequence of Kytococcus sedentarius type strain (541) - Sims_2009_Stand.Genomic.Sci_1_12 |
| Author(s) : Sims D , Brettin T , Detter JC , Han C , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Chen F , Lucas S , Tice H , Cheng JF , Bruce D , Goodwin L , Pitluck S , Ovchinnikova G , Pati A , Ivanova N , Mavrommatis K , Chen A , Palaniappan K , D'Haeseleer P , Chain P , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Schneider S , Goker M , Pukall R , Kyrpides NC , Klenk HP |
| Ref : Stand Genomic Sci , 1 :12 , 2009 |
| Abstract : |
| PubMedSearch : Sims_2009_Stand.Genomic.Sci_1_12 |
| PubMedID: 21304632 |
| Gene_locus related to this paper: kytsd-c7nfq8 , kytsd-c7nib9 , kytsd-c7niy9 , kytsd-c7nl26 , kytsd-c7nj46 , kytsd-c7nig1 |
| Title : Complete genome sequence of Rhodothermus marinus type strain (R-10) - Nolan_2009_Stand.Genomic.Sci_1_283 |
| Author(s) : Nolan M , Tindall BJ , Pomrenke H , Lapidus A , Copeland A , Glavina Del Rio T , Lucas S , Chen F , Tice H , Cheng JF , Saunders E , Han C , Bruce D , Goodwin L , Chain P , Pitluck S , Ovchinikova G , Pati A , Ivanova N , Mavromatis K , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Detter JC |
| Ref : Stand Genomic Sci , 1 :283 , 2009 |
| Abstract : |
| PubMedSearch : Nolan_2009_Stand.Genomic.Sci_1_283 |
| PubMedID: 21304669 |
| Gene_locus related to this paper: rhom4-d0mhy8 , rhom4-d0mg25 , rhom4-d0mhd2 , rhom4-d0mhw6 |
| Title : Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1) - Pukall_2009_Stand.Genomic.Sci_1_234 |
| Author(s) : Pukall R , Lapidus A , Nolan M , Copeland A , Glavina Del Rio T , Lucas S , Chen F , Tice H , Cheng JF , Chertkov O , Bruce D , Goodwin L , Kuske C , Brettin T , Detter JC , Han C , Pitluck S , Pati A , Mavrommatis K , Ivanova N , Ovchinnikova G , Chen A , Palaniappan K , Schneider S , Rohde M , Chain P , D'Haeseleer P , Goker M , Bristow J , Eisen JA , Markowitz V , Kyrpides NC , Klenk HP , Hugenholtz P |
| Ref : Stand Genomic Sci , 1 :234 , 2009 |
| Abstract : |
| PubMedSearch : Pukall_2009_Stand.Genomic.Sci_1_234 |
| PubMedID: 21304663 |
| Gene_locus related to this paper: slahd-c7n2q9 , slahd-c7n5g8 , slahd-c7n8d3 , slahd-c7n116 , slahd-c7n1y7 , slahd-c7n5i5 , slahd-c7n6x8 , slahd-c7n8a4 , slahd-c7n2t9 |
| Title : Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria - Lo_2007_Nature_446_537 |
| Author(s) : Lo I , Denef VJ , VerBerkmoes NC , Shah MB , Goltsman D , DiBartolo G , Tyson GW , Allen EE , Ram RJ , Detter JC , Richardson P , Thelen MP , Hettich RL , Banfield JF |
| Ref : Nature , 446 :537 , 2007 |
| Abstract : |
| PubMedSearch : Lo_2007_Nature_446_537 |
| PubMedID: 17344860 |
| Title : Genome sequence of the cellulolytic gliding bacterium Cytophaga hutchinsonii - Xie_2007_Appl.Environ.Microbiol_73_3536 |
| Author(s) : Xie G , Bruce DC , Challacombe JF , Chertkov O , Detter JC , Gilna P , Han CS , Lucas S , Misra M , Myers GL , Richardson P , Tapia R , Thayer N , Thompson LS , Brettin TS , Henrissat B , Wilson DB , McBride MJ |
| Ref : Applied Environmental Microbiology , 73 :3536 , 2007 |
| Abstract : |
| PubMedSearch : Xie_2007_Appl.Environ.Microbiol_73_3536 |
| PubMedID: 17400776 |
| Gene_locus related to this paper: cyth3-q11pu3 , cyth3-q11rb1 , cyth3-q11sp5 , cyth3-q11sp6 , cyth3-q11ty5 , cyth3-q11vh6 , cyth3-q11vj5 , cyth3-q11w17 , cyth3-q11xy0 |
| Title : The Calyptogena magnifica chemoautotrophic symbiont genome - Newton_2007_Science_315_998 |
| Author(s) : Newton IL , Woyke T , Auchtung TA , Dilly GF , Dutton RJ , Fisher MC , Fontanez KM , Lau E , Stewart FJ , Richardson PM , Barry KW , Saunders E , Detter JC , Wu D , Eisen JA , Cavanaugh CM |
| Ref : Science , 315 :998 , 2007 |
| Abstract : |
| PubMedSearch : Newton_2007_Science_315_998 |
| PubMedID: 17303757 |
| Gene_locus related to this paper: rutmc-a1aw39 , rutmc-a1ax96 |
| Title : Complete genome sequence of Haemophilus somnus (Histophilus somni) strain 129Pt and comparison to Haemophilus ducreyi 35000HP and Haemophilus influenzae Rd - Challacombe_2007_J.Bacteriol_189_1890 |
| Author(s) : Challacombe JF , Duncan AJ , Brettin TS , Bruce D , Chertkov O , Detter JC , Han CS , Misra M , Richardson P , Tapia R , Thayer N , Xie G , Inzana TJ |
| Ref : Journal of Bacteriology , 189 :1890 , 2007 |
| Abstract : |
| PubMedSearch : Challacombe_2007_J.Bacteriol_189_1890 |
| PubMedID: 17172329 |
| Gene_locus related to this paper: haes1-q0i317 , haes1-q0i470 , haes2-b0utw7 , haes2-b0uvn0 , haes2-b0uwc2 |
| Title : Analysis of the neurotoxin complex genes in Clostridium botulinum A1-A4 and B1 strains: BoNT\/A3, \/Ba4 and \/B1 clusters are located within plasmids - Smith_2007_PLoS.One_2_e1271 |
| Author(s) : Smith TJ , Hill KK , Foley BT , Detter JC , Munk AC , Bruce DC , Doggett NA , Smith LA , Marks JD , Xie G , Brettin TS |
| Ref : PLoS ONE , 2 :e1271 , 2007 |
| Abstract : |
| PubMedSearch : Smith_2007_PLoS.One_2_e1271 |
| PubMedID: 18060065 |
| Gene_locus related to this paper: clob1-a7fqm2 , clob1-a7fv94 , clobl-a7gbn0 , clobh-pip , clobh-a5i3m0 , clob1-a7fvd9 , clobl-a7gbt4 |
| Title : The genome of the obligately intracellular bacterium Ehrlichia canis reveals themes of complex membrane structure and immune evasion strategies - Mavromatis_2006_J.Bacteriol_188_4015 |
| Author(s) : Mavromatis K , Doyle CK , Lykidis A , Ivanova N , Francino MP , Chain P , Shin M , Malfatti S , Larimer F , Copeland A , Detter JC , Land M , Richardson PM , Yu XJ , Walker DH , McBride JW , Kyrpides NC |
| Ref : Journal of Bacteriology , 188 :4015 , 2006 |
| Abstract : |
| PubMedSearch : Mavromatis_2006_J.Bacteriol_188_4015 |
| PubMedID: 16707693 |
| Gene_locus related to this paper: ehrcj-q3ys50 |
| Title : Reverse methanogenesis: testing the hypothesis with environmental genomics - Hallam_2004_Science_305_1457 |
| Author(s) : Hallam SJ , Putnam N , Preston CM , Detter JC , Rokhsar D , Richardson PM , DeLong EF |
| Ref : Science , 305 :1457 , 2004 |
| Abstract : |
| PubMedSearch : Hallam_2004_Science_305_1457 |
| PubMedID: 15353801 |
| Gene_locus related to this paper: 9arch-q64ad0 , 9arch-q64bc9 , 9arch-q648n1 |
| Title : The sequence and analysis of duplication-rich human chromosome 16 - Martin_2004_Nature_432_988 |
| Author(s) : Martin J , Han C , Gordon LA , Terry A , Prabhakar S , She X , Xie G , Hellsten U , Chan YM , Altherr M , Couronne O , Aerts A , Bajorek E , Black S , Blumer H , Branscomb E , Brown NC , Bruno WJ , Buckingham JM , Callen DF , Campbell CS , Campbell ML , Campbell EW , Caoile C , Challacombe JF , Chasteen LA , Chertkov O , Chi HC , Christensen M , Clark LM , Cohn JD , Denys M , Detter JC , Dickson M , Dimitrijevic-Bussod M , Escobar J , Fawcett JJ , Flowers D , Fotopulos D , Glavina T , Gomez M , Gonzales E , Goodstein D , Goodwin LA , Grady DL , Grigoriev I , Groza M , Hammon N , Hawkins T , Haydu L , Hildebrand CE , Huang W , Israni S , Jett J , Jewett PB , Kadner K , Kimball H , Kobayashi A , Krawczyk MC , |