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| Title : Complete genome sequence of Sphingobium sp. strain SYK-6, a degrader of lignin-derived biaryls and monoaryls - Masai_2012_J.Bacteriol_194_534 |
| Author(s) : Masai E , Kamimura N , Kasai D , Oguchi A , Ankai A , Fukui S , Takahashi M , Yashiro I , Sasaki H , Harada T , Nakamura S , Katano Y , Narita-Yamada S , Nakazawa H , Hara H , Katayama Y , Fukuda M , Yamazaki S , Fujita N |
| Ref : Journal of Bacteriology , 194 :534 , 2012 |
| Abstract : Masai_2012_J.Bacteriol_194_534 |
| ESTHER : Masai_2012_J.Bacteriol_194_534 |
| PubMedSearch : Masai_2012_J.Bacteriol_194_534 |
| PubMedID: 22207743 |
| Gene_locus related to this paper: 9sphn-g2itm4 , 9sphn-g2iml3 , sphsk-g2ijj5 |
| Title : Uncovering the protocatechuate 2,3-cleavage pathway genes - Kasai_2009_J.Bacteriol_191_6758 |
| Author(s) : Kasai D , Fujinami T , Abe T , Mase K , Katayama Y , Fukuda M , Masai E |
| Ref : Journal of Bacteriology , 191 :6758 , 2009 |
| Abstract : Kasai_2009_J.Bacteriol_191_6758 |
| ESTHER : Kasai_2009_J.Bacteriol_191_6758 |
| PubMedSearch : Kasai_2009_J.Bacteriol_191_6758 |
| PubMedID: 19717587 |
| Title : Isolation of dibenzofuran-degrading bacterium, Nocardioides sp. DF412, and characterization of its dibenzofuran degradation genes - Miyauchi_2008_J.Biosci.Bioeng_105_628 |
| Author(s) : Miyauchi K , Sukda P , Nishida T , Ito E , Matsumoto Y , Masai E , Fukuda M |
| Ref : J Biosci Bioeng , 105 :628 , 2008 |
| Abstract : Miyauchi_2008_J.Biosci.Bioeng_105_628 |
| ESTHER : Miyauchi_2008_J.Biosci.Bioeng_105_628 |
| PubMedSearch : Miyauchi_2008_J.Biosci.Bioeng_105_628 |
| PubMedID: 18640602 |
| Gene_locus related to this paper: 9acto-b0i4w7 |
| Title : A tetrahydrofolate-dependent O-demethylase, LigM, is crucial for catabolism of vanillate and syringate in Sphingomonas paucimobilis SYK-6 - Abe_2005_J.Bacteriol_187_2030 |
| Author(s) : Abe T , Masai E , Miyauchi K , Katayama Y , Fukuda M |
| Ref : Journal of Bacteriology , 187 :2030 , 2005 |
| Abstract : Abe_2005_J.Bacteriol_187_2030 |
| ESTHER : Abe_2005_J.Bacteriol_187_2030 |
| PubMedSearch : Abe_2005_J.Bacteriol_187_2030 |
| PubMedID: 15743951 |
| Gene_locus related to this paper: psepa-q60fx2 |
| Title : A novel tetrahydrofolate-dependent O-demethylase gene is essential for growth of Sphingomonas paucimobilis SYK-6 with syringate - Masai_2004_J.Bacteriol_186_2757 |
| Author(s) : Masai E , Sasaki M , Minakawa Y , Abe T , Sonoki T , Miyauchi K , Katayama Y , Fukuda M |
| Ref : Journal of Bacteriology , 186 :2757 , 2004 |
| Abstract : Masai_2004_J.Bacteriol_186_2757 |
| ESTHER : Masai_2004_J.Bacteriol_186_2757 |
| PubMedSearch : Masai_2004_J.Bacteriol_186_2757 |
| PubMedID: 15090517 |
| Gene_locus related to this paper: psepa-q60fx2 |
| Title : Cloning and characterization of the ferulic acid catabolic genes of Sphingomonas paucimobilis SYK-6 - Masai_2002_Appl.Environ.Microbiol_68_4416 |
| Author(s) : Masai E , Harada K , Peng X , Kitayama H , Katayama Y , Fukuda M |
| Ref : Applied Environmental Microbiology , 68 :4416 , 2002 |
| Abstract : Masai_2002_Appl.Environ.Microbiol_68_4416 |
| ESTHER : Masai_2002_Appl.Environ.Microbiol_68_4416 |
| PubMedSearch : Masai_2002_Appl.Environ.Microbiol_68_4416 |
| PubMedID: 12200295 |
| Gene_locus related to this paper: psepa-Q7WST2 |
| Title : Tetrahydrofolate-dependent vanillate and syringate O-demethylation links tightly to one-carbon metabolic pathway associated with amino acid synthesis and DNA methylation in the lignin metabolism of Sphingomonas paucimobilis SYK-6. - Sonoki_2002_J.Wood.Sci_48_434 |
| Author(s) : Sonoki T , Otsuka Y , Ikeda S , Masai E , Kajita S , Katayama Y |
| Ref : J Wood Sci , 48 :434 , 2002 |
| Abstract : Sonoki_2002_J.Wood.Sci_48_434 |
| ESTHER : Sonoki_2002_J.Wood.Sci_48_434 |
| PubMedSearch : Sonoki_2002_J.Wood.Sci_48_434 |
| PubMedID: |
| Gene_locus related to this paper: psepa-q60fx2 |
| Title : Crystal structure of 2-hydroxyl-6-oxo-6-phenylhexa-2,4-dienoic acid (HPDA) hydrolase (BphD enzyme) from the Rhodococcus sp. strain RHA1 of the PCB degradation pathway - Nandhagopal_2001_J.Mol.Biol_309_1139 |
| Author(s) : Nandhagopal N , Yamada A , Hatta T , Masai E , Fukuda M , Mitsui Y , Senda T |
| Ref : Journal of Molecular Biology , 309 :1139 , 2001 |
| Abstract : Nandhagopal_2001_J.Mol.Biol_309_1139 |
| ESTHER : Nandhagopal_2001_J.Mol.Biol_309_1139 |
| PubMedSearch : Nandhagopal_2001_J.Mol.Biol_309_1139 |
| PubMedID: 11399084 |
| Gene_locus related to this paper: rhosp-bphd |
| Title : Two nearly identical aromatic compound hydrolase genes in a strong polychlorinated biphenyl degrader, Rhodococcus sp. strain RHA1 - Yamada_1998_Appl.Environ.Microbiol_64_2006 |
| Author(s) : Yamada A , Kishi H , Sugiyama K , Hatta T , Nakamura K , Masai E , Fukuda M |
| Ref : Applied Environmental Microbiology , 64 :2006 , 1998 |
| Abstract : Yamada_1998_Appl.Environ.Microbiol_64_2006 |
| ESTHER : Yamada_1998_Appl.Environ.Microbiol_64_2006 |
| PubMedSearch : Yamada_1998_Appl.Environ.Microbiol_64_2006 |
| PubMedID: 9603807 |
| Gene_locus related to this paper: rhosp-EtbD1 , rhosp-EtbD2 |
| Title : The bphDEF meta-cleavage pathway genes involved in biphenyl\/polychlorinated biphenyl degradation are located on a linear plasmid and separated from the initial bphACB genes in Rhodococcus sp. strain RHA1 - Masai_1997_Gene_187_141 |
| Author(s) : Masai E , Sugiyama K , Iwashita N , Shimizu S , Hauschild JE , Hatta T , Kimbara K , Yano K , Fukuda M |
| Ref : Gene , 187 :141 , 1997 |
| Abstract : Masai_1997_Gene_187_141 |
| ESTHER : Masai_1997_Gene_187_141 |
| PubMedSearch : Masai_1997_Gene_187_141 |
| PubMedID: 9073078 |
| Gene_locus related to this paper: rhosp-bphd |
| Title : Three-Dimensional Structure of Microbial 2-Hydroxyl-6-Oxo-6-Phenylhexa-2,4- Dienoic Acid (Hpda) Hydrolase (Bphd Enzyme) from Rhodococcus Sp. Strain Rha1, in the Pcb Degradation Pathway - |
| Author(s) : Nandhagopal N , Senda T , Hatta T , Yamada A , Masai E , Fukuda M , Mitsui Y |
| Ref : Proc.Jpn.Acad.,Ser.B , 73 :154 , 1997 |
| PubMedID: |
| Gene_locus related to this paper: rhosp-bphd |
| Title : Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the gene - Hauschild_1996_Appl.Environ.Microbiol_62_2940 |
| Author(s) : Hauschild JE , Masai E , Sugiyama K , Hatta T , Kimbara K , Fukuda M , Yano K |
| Ref : Applied Environmental Microbiology , 62 :2940 , 1996 |
| Abstract : Hauschild_1996_Appl.Environ.Microbiol_62_2940 |
| ESTHER : Hauschild_1996_Appl.Environ.Microbiol_62_2940 |
| PubMedSearch : Hauschild_1996_Appl.Environ.Microbiol_62_2940 |
| PubMedID: 8702287 |
| Gene_locus related to this paper: rhosp-bphd |