Gene_Locus Report

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Gene_locus Report for: orysa-Q93VD4

Oryza sativa (Rice) p0011g08.10 protein (p0030h07.40 protein)

Relationship
Family|Plant_carboxylesterase
Block| H
Position in NCBI Life Tree|Oryza sativa
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > Liliopsida: N E > Petrosaviidae: N E > commelinids: N E > Poales: N E > Poaceae: N E > BOP clade: N E > Oryzoideae: N E > Oryzeae: N E > Oryzinae: N E > Oryza: N E > Oryza sativa: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AP003225, AP003045
1 UniProt : Q93VD4
1 Interpro : Q93VD4
1 Prodom : Q93VD4
1 Pfam : Q93VD4
1 PIRSF : Q93VD4
1 SUPERFAM : Q93VD4
Sequence
Graphical view for this peptide sequence: orysa-Q93VD4
Colored MSA for Plant_carboxylesterase (raw)
MSGHAAPAPHVVEDYRGVIQLLSDGTVVRSDAGSGAGALLPPEDFPDVPG
VQWKDLVYDATHGLKLRVYRPPTAGDAERLPVLVCFHGGGYCLGTFEKPS
FHCCCQRLASELRAVVLSADYRLGPEHRLPAAIDDGAAVLSWLRDQAMSG
PGADSWLAESADFARVFVAGESAGGNMSHHVAVLIGSGQLTVDPLRVAGY
MLLTPFFGGVERAPSEAEPPAGAFFTPDMSDKLWRLSLPEGATRDHPVAN
PFGPDSPSLAAVAFPPVLVVVAGRDILHDRTVHYAARLKEMEKPVELVTF
EEEKHLFLSLQPWSEPANELIRVMKRFIHKDEGSNNF
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSGHAAPAPHVVEDYRGVIQLLSDGTVVRSDAGSGAGALLPPEDFPDVPG
VQWKDLVYDATHGLKLRVYRPPTAGDAERLPVLVCFHGGGYCLGTFEKPS
FHCCCQRLASELRAVVLSADYRLGPEHRLPAAIDDGAAVLSWLRDQAMSG
PGADSWLAESADFARVFVAGESAGGNMSHHVAVLIGSGQLTVDPLRVAGY
MLLTPFFGGVERAPSEAEPPAGAFFTPDMSDKLWRLSLPEGATRDHPVAN
PFGPDSPSLAAVAFPPVLVVVAGRDILHDRTVHYAARLKEMEKPVELVTF
EEEKHLFLSLQPWSEPANELIRVMKRFIHKDEGSNNF


Reference
    Title: The carboxylesterase gene family from Arabidopsis thaliana
    Marshall SD, Putterill JJ, Plummer KM, Newcomb RD
    Ref: Journal of Molecular Evolution, 57:487, 2003 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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