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arath-AT5G27320

Arabidopsis thaliana (Mouse-ear cress) Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress) Probable gibberellin receptor GID1L3 GID1-like protein 3 AtCXE19 AT5G27320 F21A20.30

Comment

Relationship

Family : Plant_carboxylesterase

Block : H

Position in NCBI Life Tree : Arabidopsis thaliana

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Eukaryota N E > Viridiplantae N E > Streptophyta N E > Streptophytina N E > Embryophyta N E > Tracheophyta N E > Euphyllophyta N E > Spermatophyta N E > Magnoliophyta N E > Mesangiospermae N E > eudicotyledons N E > Gunneridae N E > Pentapetalae N E > rosids N E > malvids N E > Brassicales N E > Brassicaceae N E > Camelineae N E > Arabidopsis N E > Arabidopsis thaliana N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MAGSEEVNLI ESKTVVPLNT WVLISNFKLA YNLLRRPDGT FNRHLAEFLD RKVPANANPV NGVFSFDVII DRQTNLLSRV YRPADAGTSP SITDLQNPVD GEIVPVIVFF HGGSFAHSSA NSAIYDTLCR RLVGLCGAVV VSVNYRRAPE NRYPCAYDDG WAVLKWVNSS SWLRSKKDSK VRIFLAGDSS GGNIVHNVAV RAVESRIDVL GNILLNPMFG GTERTESEKR LDGKYFVTVR DRDWYWRAFL PEGEDREHPA CSPFGPRSKS LEGLSFPKSL VVVAGLDLIQ DWQLKYAEGL KKAGQEVKLL YLEQATIGFY LLPNNNHFHT VMDEIAAFVN AECQ

References (8)

Title : The Arabidopsis lyrata genome sequence and the basis of rapid genome size change - Hu_2011_Nat.Genet_43_476
Author(s) : Hu TT , Pattyn P , Bakker EG , Cao J , Cheng JF , Clark RM , Fahlgren N , Fawcett JA , Grimwood J , Gundlach H , Haberer G , Hollister JD , Ossowski S , Ottilar RP , Salamov AA , Schneeberger K , Spannagl M , Wang X , Yang L , Nasrallah ME , Bergelson J , Carrington JC , Gaut BS , Schmutz J , Mayer KF , Van de Peer Y , Grigoriev IV , Nordborg M , Weigel D , Guo YL
Ref : Nat Genet , 43 :476 , 2011
Abstract :
PubMedSearch : Hu_2011_Nat.Genet_43_476
PubMedID: 21478890
Gene_locus related to this paper: arall-d7kc59 , arall-d7kfz1 , arall-d7kjk9 , arall-d7kk58 , arall-d7kuj1 , arall-d7kwx5 , arall-d7kzq8 , arall-d7laf7 , arall-D7LAK6 , arall-d7ltj2 , arall-d7lu11 , arall-d7ly06 , arall-d7lyn6 , arall-d7m1k0 , arall-d7m1k1 , arall-d7m1k3 , arall-d7m1l4 , arall-d7m814 , arall-d7mbk0 , arall-d7mbn8 , arall-d7mgs1 , arall-d7mi04 , arall-d7mld7 , arall-d7mpg7 , arall-d7mul9 , arath-At2g45610 , arath-At1g05790 , arath-At1g09980 , arath-At1g18360 , arath-AT1G29120 , arath-AT1G73920 , arath-AT1G76140 , arath-AT2G05260 , arath-At2g15230 , arath-At2g24280 , arath-AT2G42690 , arath-At2g47630 , arath-AT3G12150 , arath-At3g61680 , arath-AT3g62590 , arath-AT4G00500 , arath-AT4G25770 , arath-AT4g30610 , arath-At5g11650 , arath-At5g13640 , arath-AT5G19050 , arath-AT5G20060 , arath-AT5G20520 , arath-AT5G27320 , arath-At5g42930 , arath-At5g47330 , arath-CGEP , arath-clh1 , arath-clh2 , arath-F1N13.220 , arath-F2G14.100 , arath-F12A4.4 , arath-F14O10.2 , arath-SCP27 , arath-HNL , arath-GID1B , arath-LIP2 , arath-At5g17670 , arath-pip , arath-PLA11 , arath-PLA12 , arath-PLA13 , arath-PLA15 , arath-PLA17 , arath-Q8LPF5 , arath-Q9FFZ1 , arath-Q9FJ29 , arath-Q9FKP9 , arath-Q9FNF6 , arath-q9lhe8 , arath-Q9SFF6 , arath-q84w08 , arath-SCP7 , arath-SCP8 , arath-SCP26 , arath-SCP28 , arath-SCP33 , arath-SCP40 , arath-SCPL34 , arath-At4g12230 , arath-MES14 , arath-T19F11.2 , arath-MES10 , arath-At5g11790 , arath-T26B15.8 , arath-ZW18 , arall-d7l971 , arall-d7lfd3 , arall-d7lg04 , arall-d7lg05 , arall-d7lg06 , arall-d7lg07 , arall-d7mb17 , arall-d7mb18 , arall-d7l7v2 , arall-d7l7v3 , arall-d7lst0 , arall-d7lfw9 , arall-d7mgs6 , arall-d7mur3 , arall-d7kjr5 , arall-d7l7v1 , arall-d7ls88 , arall-d7kzg6 , arall-d7kcm6 , arall-d7krm0 , arall-d7kwe4 , arall-d7lri7 , arall-d7kq26

Title : Differential expression and affinities of Arabidopsis gibberellin receptors can explain variation in phenotypes of multiple knock-out mutants - Suzuki_2009_Plant.J_60_48
Author(s) : Suzuki H , Park SH , Okubo K , Kitamura J , Ueguchi-Tanaka M , Iuchi S , Katoh E , Kobayashi M , Yamaguchi I , Matsuoka M , Asami T , Nakajima M
Ref : Plant J , 60 :48 , 2009
Abstract :
PubMedSearch : Suzuki_2009_Plant.J_60_48
PubMedID: 19500306
Gene_locus related to this paper: arath-AT5G27320 , arath-GID1B

Title : Multiple loss-of-function of Arabidopsis gibberellin receptor AtGID1s completely shuts down a gibberellin signal - Iuchi_2007_Plant.J_50_958
Author(s) : Iuchi S , Suzuki H , Kim YC , Iuchi A , Kuromori T , Ueguchi-Tanaka M , Asami T , Yamaguchi I , Matsuoka M , Kobayashi M , Nakajima M
Ref : Plant J , 50 :958 , 2007
Abstract :
PubMedSearch : Iuchi_2007_Plant.J_50_958
PubMedID: 17521411
Gene_locus related to this paper: arath-AT5G27320 , arath-GID1B

Title : Genetic characterization and functional analysis of the GID1 gibberellin receptors in Arabidopsis - Griffiths_2006_Plant.Cell_18_3399
Author(s) : Griffiths J , Murase K , Rieu I , Zentella R , Zhang ZL , Powers SJ , Gong F , Phillips AL , Hedden P , Sun TP , Thomas SG
Ref : Plant Cell , 18 :3399 , 2006
Abstract :
PubMedSearch : Griffiths_2006_Plant.Cell_18_3399
PubMedID: 17194763
Gene_locus related to this paper: arath-AT5G27320 , arath-GID1B

Title : Identification and characterization of Arabidopsis gibberellin receptors - Nakajima_2006_Plant.J_46_880
Author(s) : Nakajima M , Shimada A , Takashi Y , Kim YC , Park SH , Ueguchi-Tanaka M , Suzuki H , Katoh E , Iuchi S , Kobayashi M , Maeda T , Matsuoka M , Yamaguchi I
Ref : Plant J , 46 :880 , 2006
Abstract :
PubMedSearch : Nakajima_2006_Plant.J_46_880
PubMedID: 16709201
Gene_locus related to this paper: arath-AT5G27320 , arath-AT5G62180 , arath-GID1B

Title : Empirical analysis of transcriptional activity in the Arabidopsis genome - Yamada_2003_Science_302_842
Author(s) : Yamada K , Lim J , Dale JM , Chen H , Shinn P , Palm CJ , Southwick AM , Wu HC , Kim C , Nguyen M , Pham P , Cheuk R , Karlin-Newmann G , Liu SX , Lam B , Sakano H , Wu T , Yu G , Miranda M , Quach HL , Tripp M , Chang CH , Lee JM , Toriumi M , Chan MM , Tang CC , Onodera CS , Deng JM , Akiyama K , Ansari Y , Arakawa T , Banh J , Banno F , Bowser L , Brooks S , Carninci P , Chao Q , Choy N , Enju A , Goldsmith AD , Gurjal M , Hansen NF , Hayashizaki Y , Johnson-Hopson C , Hsuan VW , Iida K , Karnes M , Khan S , Koesema E , Ishida J , Jiang PX , Jones T , Kawai J , Kamiya A , Meyers C , Nakajima M , Narusaka M , Seki M , Sakurai T , Satou M , Tamse R , Vaysberg M , Wallender EK , Wong C , Yamamura Y , Yuan S , Shinozaki K , Davis RW , Theologis A , Ecker JR
Ref : Science , 302 :842 , 2003
Abstract :
PubMedSearch : Yamada_2003_Science_302_842
PubMedID: 14593172
Gene_locus related to this paper: arath-AT2G42690 , arath-AT4g30610 , arath-At5g13640 , arath-AT5G20520 , arath-AT5G27320 , arath-CGEP , arath-clh1 , arath-clh2 , arath-CXE12 , arath-CXE15 , arath-SCP25 , arath-F14F8.240 , arath-MES6 , arath-LCAT1 , arath-PLA11 , arath-PLA15 , arath-PLA16 , arath-PLA17 , arath-SCP8 , arath-SCP11 , arath-SCP40 , arath-MES14 , arath-AXR4 , arath-SFGH , arath-B9DFR3 , arath-pae2

Title : The carboxylesterase gene family from Arabidopsis thaliana - Marshall_2003_J.Mol.Evol_57_487
Author(s) : Marshall SD , Putterill JJ , Plummer KM , Newcomb RD
Ref : Journal of Molecular Evolution , 57 :487 , 2003
Abstract :
PubMedSearch : Marshall_2003_J.Mol.Evol_57_487
PubMedID: 14738307
Gene_locus related to this paper: 9rosa-CXE1 , 9rosa-CXE2 , 9rosa-CXE3 , 9rosa-CXE4 , 9rosa-CXE5 , 9rosa-CXE6 , 9rosa-CXE7 , 9rosa-CXE8 , 9rosa-CXE9 , 9rosa-CXE10 , 9rosa-CXE11 , 9rosa-CXE12 , actde-CXE1 , actde-CXE3 , actde-CXE4 , actde-CXE5 , actde-CXE6 , actde-CXE7 , actde-CXE8 , actde-CXE9 , actde-CXE10 , arath-At2g45610 , arath-AT2G03550 , arath-AT5G27320 , arath-AT5G62180 , arath-CXE12 , arath-CXE15 , arath-F1N13.220 , arath-F14J22.11 , arath-F14J22.12 , arath-F16N3.25 , arath-CXE8 , arath-At5g14310 , arath-CXE6 , arath-gid1 , arath-GID1B , arath-CXE11 , arath-CXE18 , arath-Q8LF34 , arath-CXE13 , arath-CXE1 , capan-PepEST , lyces-Q9ZWF3 , nicta-hsr203j , orysa-Q7XTC5 , orysa-Q852M6 , orysa-Q8GSE8 , orysa-Q8H5P9 , orysa-Q8H5P5 , orysa-Q8H5P4 , orysa-Q7F1Y5 , orysa-Q8GS14 , orysa-Q8GSJ3 , orysa-Q8GRZ3 , orysa-Q8H3K6 , orysa-Q8H3K4 , orysa-Q8RZ79 , orysa-Q93VD4 , orysa-Q94JD7 , pinra-PrMC3 , pissa-Q9SSY8 , vitvi-BIG8.1

Title : Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana - Tabata_2000_Nature_408_823
Author(s) : Tabata S , Kaneko T , Nakamura Y , Kotani H , Kato T , Asamizu E , Miyajima N , Sasamoto S , Kimura T , Hosouchi T , Kawashima K , Kohara M , Matsumoto M , Matsuno A , Muraki A , Nakayama S , Nakazaki N , Naruo K , Okumura S , Shinpo S , Takeuchi C , Wada T , Watanabe A , Yamada M , Yasuda M , Sato S , de la Bastide M , Huang E , Spiegel L , Gnoj L , O'Shaughnessy A , Preston R , Habermann K , Murray J , Johnson D , Rohlfing T , Nelson J , Stoneking T , Pepin K , Spieth J , Sekhon M , Armstrong J , Becker M , Belter E , Cordum H , Cordes M , Courtney L , Courtney W , Dante M , Du H , Edwards J , Fryman J , Haakensen B , Lamar E , Latreille P , Leonard S , Meyer R , Mulvaney E , Ozersky P , Riley A , Strowmatt C , Wagner-McPherson C , Wollam A , Yoakum M , Bell M , Dedhia N , Parnell L , Shah R , Rodriguez M , See LH , Vil D , Baker J , Kirchoff K , Toth K , King L , Bahret A , Miller B , Marra M , Martienssen R , McCombie WR , Wilson RK , Murphy G , Bancroft I , Volckaert G , Wambutt R , Dusterhoft A , Stiekema W , Pohl T , Entian KD , Terryn N , Hartley N , Bent E , Johnson S , Langham SA , McCullagh B , Robben J , Grymonprez B , Zimmermann W , Ramsperger U , Wedler H , Balke K , Wedler E , Peters S , van Staveren M , Dirkse W , Mooijman P , Lankhorst RK , Weitzenegger T , Bothe G , Rose M , Hauf J , Berneiser S , Hempel S , Feldpausch M , Lamberth S , Villarroel R , Gielen J , Ardiles W , Bents O , Lemcke K , Kolesov G , Mayer K , Rudd S , Schoof H , Schueller C , Zaccaria P , Mewes HW , Bevan M , Fransz P
Ref : Nature , 408 :823 , 2000
Abstract :
PubMedSearch : Tabata_2000_Nature_408_823
PubMedID: 11130714
Gene_locus related to this paper: arath-At5g11650 , arath-At5g16120 , arath-at5g18630 , arath-AT5G20520 , arath-At5g21950 , arath-AT5G27320 , arath-CXE15 , arath-F1N13.220 , arath-F14F8.240 , arath-q3e9e4 , arath-q8lae9 , arath-Q8LFB7 , arath-q9ffg7 , arath-q9fij5 , arath-Q9LVU7 , arath-q66gm8 , arath-SCPL34 , arath-B9DFR3 , arath-a0a1p8bcz0