Klenk_2012_Stand.Genomic.Sci_6_265

Reference

Title : Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)) - Klenk_2012_Stand.Genomic.Sci_6_265
Author(s) : Klenk HP , Lu M , Lucas S , Lapidus A , Copeland A , Pitluck S , Goodwin LA , Han C , Tapia R , Brambilla EM , Potter G , Land M , Ivanova N , Rohde M , Goker M , Detter JC , Li WJ , Kyrpides NC , Woyke T
Ref : Stand Genomic Sci , 6 :265 , 2012
Abstract :

Saccharomonospora marina Liu et al. 2010 is a member of the genus Saccharomonospora, in the family Pseudonocardiaceae that is poorly characterized at the genome level thus far. Members of the genus Saccharomonospora are of interest because they originate from diverse habitats, such as leaf litter, manure, compost, surface of peat, moist, over-heated grain, and ocean sediment, where they might play a role in the primary degradation of plant material by attacking hemicellulose. Organisms belonging to the genus are usually Gram-positive staining, non-acid fast, and classify among the actinomycetes. Here we describe the features of this organism, together with the complete genome sequence (permanent draft status), and annotation. The 5,965,593 bp long chromosome with its 5,727 protein-coding and 57 RNA genes was sequenced as part of the DOE funded Community Sequencing Program (CSP) 2010 at the Joint Genome Institute (JGI).

PubMedSearch : Klenk_2012_Stand.Genomic.Sci_6_265
PubMedID: 22768369
Gene_locus related to this paper: 9pseu-h5x8w4 , 9pseu-h5x5e2 , 9pseu-h5xbd6 , 9pseu-h5x783

Related information

Gene_locus 9pseu-h5x8w4    9pseu-h5x5e2    9pseu-h5xbd6    9pseu-h5x783

Citations formats

Klenk HP, Lu M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Brambilla EM, Potter G, Land M, Ivanova N, Rohde M, Goker M, Detter JC, Li WJ, Kyrpides NC, Woyke T (2012)
Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T))
Stand Genomic Sci 6 :265

Klenk HP, Lu M, Lucas S, Lapidus A, Copeland A, Pitluck S, Goodwin LA, Han C, Tapia R, Brambilla EM, Potter G, Land M, Ivanova N, Rohde M, Goker M, Detter JC, Li WJ, Kyrpides NC, Woyke T (2012)
Stand Genomic Sci 6 :265