Tindall_2009_Stand.Genomic.Sci_1_270

Reference

Title : Complete genome sequence of Halomicrobium mukohataei type strain (arg-2) - Tindall_2009_Stand.Genomic.Sci_1_270
Author(s) : Tindall BJ , Schneider S , Lapidus A , Copeland A , Glavina Del Rio T , Nolan M , Lucas S , Chen F , Tice H , Cheng JF , Saunders E , Bruce D , Goodwin L , Pitluck S , Mikhailova N , Pati A , Ivanova N , Mavrommatis K , Chen A , Palaniappan K , Chain P , Land M , Hauser L , Chang YJ , Jeffries CD , Brettin T , Han C , Rohde M , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC , Detter JC
Ref : Stand Genomic Sci , 1 :270 , 2009
Abstract :

Halomicrobium mukohataei (Ihara et al. 1997) Oren et al. 2002 is the type species of the genus Halomicrobium. It is of phylogenetic interest because of its isolated location within the large euryarchaeal family Halobacteriaceae. H. mukohataei is an extreme halophile that grows essentially aerobically, but can also grow anaerobically under a change of morphology and with nitrate as electron acceptor. The strain, whose genome is described in this report, is a free-living, motile, Gram-negative euryarchaeon, originally isolated from Salinas Grandes in Jujuy, Andes highlands, Argentina. Its genome contains three genes for the 16S rRNA that differ from each other by up to 9%. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first completed genome sequence from the poorly populated genus Halomicrobium, and the 3,332,349 bp long genome (chromosome and one plasmid) with its 3416 protein-coding and 56 RNA genes is part of the Genomic Encyclopedia of Bacteria and Archaea project.

PubMedSearch : Tindall_2009_Stand.Genomic.Sci_1_270
PubMedID: 21304667
Gene_locus related to this paper: halmd-c7nwe5 , halmd-c7nwh2 , halmd-c7p0c0 , halmd-c7p2d1 , halmd-c7p3m9

Related information

Gene_locus halmd-c7nwe5    halmd-c7nwh2    halmd-c7p0c0    halmd-c7p2d1    halmd-c7p3m9

Citations formats

Tindall BJ, Schneider S, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Bruce D, Goodwin L, Pitluck S, Mikhailova N, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, Chain P, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Han C, Rohde M, Goker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC, Detter JC (2009)
Complete genome sequence of Halomicrobium mukohataei type strain (arg-2)
Stand Genomic Sci 1 :270

Tindall BJ, Schneider S, Lapidus A, Copeland A, Glavina Del Rio T, Nolan M, Lucas S, Chen F, Tice H, Cheng JF, Saunders E, Bruce D, Goodwin L, Pitluck S, Mikhailova N, Pati A, Ivanova N, Mavrommatis K, Chen A, Palaniappan K, Chain P, Land M, Hauser L, Chang YJ, Jeffries CD, Brettin T, Han C, Rohde M, Goker M, Bristow J, Eisen JA, Markowitz V, Hugenholtz P, Klenk HP, Kyrpides NC, Detter JC (2009)
Stand Genomic Sci 1 :270