PHA_depolymerase_arom
Relationship
Comment
This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans and related species. This enzyme is part of polyester storage and mobilisation system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid
Database
Interpro : IPR011942 Poly(3-hydroxyalkanoate) depolymerase
PIRSF : No PIRSF
Pdoc : No Pdoc
Pfam : No Pfam
Prints : No Print
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Gene_locus | Name | Species |
|---|---|---|
| psecl-PHAZ | Pseudomonas chlororaphis (Pseudomonas aureofaciens): Intracellular EY04_01535 PHAZ | Pseudomonas chlororaphis |
| psesp-Est33 | Pseudomonas sp. strain E5-12 Esterase Est33 | Pseudomonas sp. |
| 9psed-q5udq2 | Pseudomonas sp. 3Y2 pha depolymerase (fragment) | Pseudomonas sp. 3Y2 |
| 9psed-q6ufw0 | Pseudomonas sp. HJ-2 mcl-pha extracellular depolymerase | Pseudomonas sp. HJ-2 |
| 9sphn-q2n9u0 | Erythrobacter litoralis HTCC2594 poly(3-hydroxyalkanoate) depolymerase | Erythrobacter litoralis HTCC2594 |
| burca-PHAZ | Burkholderia caryophylli pha depolymerase | Burkholderia caryophylli |
| burs3-q396v5 | Burkholderia sp. (strain 383) Burkholderia cepacia strain ATCC 1776 poly(3-hydroxyalkanoate) depolymerase | Burkholderia sp. |
| cuppj-q46zd3 | Cupriavidus pinatubonensis (strain JMP134 \/ LMG 1197) (Alcaligenes eutrophus) (Ralstonia eutropha) poly(3-hydroxyalkanoate) depolymerase | Ralstonia eutropha |
| novad-q2g8e5 | Novosphingobium aromaticivorans (strain DSM 12444) alpha\/beta hydrolase | Novosphingobium aromaticivorans |
| pse14-q48pi8 | Pseudomonas syringae pv. phaseolicola (strain 1448A \/ Race 6) poly(3-hydroxyalkanoate) depolymerase (EC 3.1.1.-) | Pseudomonas syringae pv. phaseolicola |
| pseae-phaD | Pseudomonas aeruginosa phaD gene pha-depolymerase (poly(3-hydroxyalkanoic acid) depolymerase) PA5057 | Pseudomonas aeruginosa |
| pseme-PHAZ | Pseudomonas mendocina, Pseudomonas stutzeri, Pseudomonas pseudoalcaligenes, Pseudomonas sp., Pseudomonas nitroreducens, pha depolymerase | Pseudomonas mendocina |
| pseol-phab | Pseudomonas oleovorans depolymerase (phaB) | Pseudomonas oleovorans |
| psepf-PHAZ | Pseudomonas fluorescens, Pseudomonas mediterranea, Pseudomonas corrugata, Pseudomonas sp., Comamonas testosteroni (Pseudomonas testosteroni), Pseudomonas chlororaphis (Pseudomonas aureofaciens), Pseudomonas brassicacearum, poly(3-hydroxyalkanoate) depolymerase | Pseudomonas fluorescens |
| psepf-q3kch8 | Pseudomonas fluorescens (strain PfO-1) alpha\/beta hydrolase fold | Pseudomonas fluorescens |
| psepu-PHAZ | Pseudomonas putida, Pseudomonas sp., Pseudomonas entomophila, pha depolymerase poly(3-hydroxyalkanoate)depolymerase (phaZ) | Pseudomonas putida |
| psepu-q6pli2 | Pseudomonas putida polyhydroxyalkanote depolymerase | Pseudomonas putida |
| psere-PHAZ | Pseudomonas resinovorans pha depolymerase | Pseudomonas resinovorans |
| psesy-PHAB | Pseudomonas syringae (pv. tomato) poly(3-hydroxyalkanoate) depolymerase | Pseudomonas syringae |
| sphal-q1grr6 | Sphingopyxis alaskensis (Sphingomonas alaskensis) alpha\/beta hydrolase fold | Sphingopyxis alaskensis |
| Gene_locus_frgt | Name | Species |
|---|---|---|
| 9psed-q5udq5 | Pseudomonas sp. 3Y2 pha depolymerase (fragment) | Pseudomonas sp. 3Y2 |
References (1)
| Title : Novel Biodegradable Aromatic Plastics from a Bacterial Source. Genetic and biochemical studies on a route of the phenylacetyl-coa catabolon - Garcia_1999_J.Biol.Chem_274_29228 |
| Author(s) : Garcia B , Olivera ER , Minambres B , Fernandez-Valverde M , Canedo LM , Prieto MA , Garcia JL , Martinez M , Luengo JM |
| Ref : Journal of Biological Chemistry , 274 :29228 , 1999 |
| Abstract : |
| PubMedSearch : Garcia_1999_J.Biol.Chem_274_29228 |
| PubMedID: 10506180 |
| Gene_locus related to this paper: psepu-PHAC1 , psepu-PHAC2 , psepu-PHAZ |