Gene_Locus Report

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Gene_locus Report for: yerpe-Y0507

Yersinia pestis, Yersinia pseudotuberculosis, Putative uncharacterized protein ytaP

Comment
Other strains: Yersinia pestis (Pestoides F; D106004; Pestoides A; D182038; KIM D27) biovar Antiqua (Nepal516; B42003004; Nepal516; Angola; Antiqua; UG05-0454; E1979001) biovar Orientalis (MG05-1020; IP275; F1991016; PEXU2; India 195) biovar Mediaevalis str. K1973002 Yersinia pseudotuberculosis serotype O:1b (IP 31758; PB1/+)serotype O:3 (YPIII)


Relationship
Family|Abhydrolase_7
Block| X
Position in NCBI Life Tree|Yersinia pestis
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Proteobacteria: N E > Gammaproteobacteria: N E > Enterobacterales: N E > Yersiniaceae: N E > Yersinia: N E > Yersinia pseudotuberculosis complex: N E > Yersinia pestis: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: yerpe-Y0507
Colored MSA for Abhydrolase_7 (raw)
MGVDHYCTVRYRSDTRKILRQALLTPNSTITFSAEKIEQQDRGSYIAEKI
ALNITDESRVLGLLLTPKTKGPHPAIVLLHDHGSKFDIGKEKMIRPWGDS
AKLASAQAWSDKFFSGKFVGDELAKRGYVVFSIDSIGWGDRGPMSYERQQ
ALASNFFNLGRSLAGTMAYEDMRTVDFMTTLPSVDRKRIGVLGFSMGAYR
AWQLAALSDQVAATAAISWFGNYKGLMTPDNNVLRGQSSFYMLHPGIANK
LDFPDIASLAAPRPMLLFNGGKDKLFPAQAVEQAYDKVHAIWRSQNAEPR
LVTRSWPTLGHVFYQEQQDVVFLWLDRWLK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MGVDHYCTVRYRSDTRKILRQALLTPNSTITFSAEKIEQQDRGSYIAEKI
ALNITDESRVLGLLLTPKTKGPHPAIVLLHDHGSKFDIGKEKMIRPWGDS
AKLASAQAWSDKFFSGKFVGDELAKRGYVVFSIDSIGWGDRGPMSYERQQ
ALASNFFNLGRSLAGTMAYEDMRTVDFMTTLPSVDRKRIGVLGFSMGAYR
AWQLAALSDQVAATAAISWFGNYKGLMTPDNNVLRGQSSFYMLHPGIANK
LDFPDIASLAAPRPMLLFNGGKDKLFPAQAVEQAYDKVHAIWRSQNAEPR
LVTRSWPTLGHVFYQEQQDVVFLWLDRWLK


References
4 more
    Title: Draft genome sequences of Yersinia pestis isolates from natural foci of endemic plague in China
    Eppinger M, Guo Z, Sebastian Y, Song Y, Lindler LE, Yang R, Ravel J
    Ref: Journal of Bacteriology, 191:7628, 2009 : PubMed

            

    Title: Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
    Chain PS, Carniel E, Larimer FW, Lamerdin J, Stoutland PO, Regala WM, Georgescu AM, Vergez LM, Land ML and Garcia E <13 more author(s)>
    Ref: Proc Natl Acad Sci U S A, 101:13826, 2004 : PubMed

            

    Title: Genome sequence of Yersinia pestis KIM
    Deng W, Burland V, Plunkett G, 3rd, Boutin A, Mayhew GF, Liss P, Perna NT, Rose DJ, Mau B and Perry RD <11 more author(s)>
    Ref: Journal of Bacteriology, 184:4601, 2002 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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