Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: arath-CXE11

Arabidopsis thaliana AtCXE11 K17E12.14 F12K2.10 At3g27320 chromosome 3

Relationship
Family|Plant_carboxylesterase
Block| H
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AP000381, BT012569
1 UniProt : Q9LK21
1 Ncbi-nid : 5672506
1 Ncbi-pid : 9294225
1 UniProt : Q9LK21
1 Interpro : Q9LK21
1 Prodom : Q9LK21
1 Pfam : Q9LK21
1 PIRSF : Q9LK21
1 SUPERFAM : Q9LK21
1 Tair database : At3g27320
Sequence
Graphical view for this peptide sequence: arath-CXE11
Colored MSA for Plant_carboxylesterase (raw)
MPSVGVKLYSVFFKFLLKHRLQNRIQSSGDESSSDPFGVTTRPEESVAAP
NPLFTDGVATKDIHIDPLTSLSVRIFLPESALTPLEPSTSACVYSGKART
LNNIAGSDLLSRRNSLGSSNSLLSHKVESRRNSYGYTTGSSSPEAGSSDV
YRGYAPSSSGGNSRKLPVMLQFHGGGWVSGSNDSVANDFFCRRMAKHCDI
IVLAVGYRLAPENRYPAACEDGFKVLKWLGKQANLAECNKSMGNSRRPGG
EVKKSEVNKHIVDAFGASLVEPWLANHADPSRCVLLGVSCGANIADYVAR
KAIEVGQNLDPVKVVAQVLMYPFFIGSVPTQSEIKQANSYFYDKPMCILA
WKLFLPEEEFSLDHQAANPLVPGRSPPLKFMPPTLTIVAEHDWMRDRAIA
YSEELRKVNVDAPVLEYKDAVHEFATLDMLLRTPQAQACAEDIAIWAKKY
ISLRGHEFSY
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPSVGVKLYSVFFKFLLKHRLQNRIQSSGDESSSDPFGVTTRPEESVAAP
NPLFTDGVATKDIHIDPLTSLSVRIFLPESALTPLEPSTSACVYSGKART
LNNIAGSDLLSRRNSLGSSNSLLSHKVESRRNSYGYTTGSSSPEAGSSDV
YRGYAPSSSGGNSRKLPVMLQFHGGGWVSGSNDSVANDFFCRRMAKHCDI
IVLAVGYRLAPENRYPAACEDGFKVLKWLGKQANLAECNKSMGNSRRPGG
EVKKSEVNKHIVDAFGASLVEPWLANHADPSRCVLLGVSCGANIADYVAR
KAIEVGQNLDPVKVVAQVLMYPFFIGSVPTQSEIKQANSYFYDKPMCILA
WKLFLPEEEFSLDHQAANPLVPGRSPPLKFMPPTLTIVAEHDWMRDRAIA
YSEELRKVNVDAPVLEYKDAVHEFATLDMLLRTPQAQACAEDIAIWAKKY
ISLRGHEFSY


References
    Title: The carboxylesterase gene family from Arabidopsis thaliana
    Marshall SD, Putterill JJ, Plummer KM, Newcomb RD
    Ref: Journal of Molecular Evolution, 57:487, 2003 : PubMed

            

    Title: Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones
    Kaneko T, Katoh T, Sato S, Nakamura A, Asamizu E, Tabata S
    Ref: DNA Research, 7:217, 2000 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer