Gene_locus Report for: danre-q4v960 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:113969
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Actinopterygii: N E > Actinopteri: N E > Neopterygii: N E > Teleostei: N E > Osteoglossocephalai: N E > Clupeocephala: N E > Otomorpha: N E > Ostariophysi: N E > Otophysi: N E > Cypriniphysae: N E > Cypriniformes: N E > Cyprinoidea: N E > Cyprinidae: N E > Danio: N E > Danio rerio: N E A85-EsteraseD-FGH :
danre-q567k2 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:111984 .
ABHD6-Lip :
danre-e7f881 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein ,
danre-e9qd39 Danio rerio (Zebrafish) (Brachydanio rerio) Abhydrolase domain-containing 6, acylglycerol lipase b .
ABHD8 :
danre-e7f070 Danio rerio (Zebrafish) (Brachydanio rerio). Abhydrolase domain-containing 8b .
ABHD10 :
danre-ABHD10a Danio rerio (Zebrafish) (Brachydanio rerio) Abhydrolase domain-containing 10a (abhd10) ,
danre-ABHD10b Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein ABHD10b .
ABHD11-Acetyl_transferase :
danre-q6drd9 Danio rerio (Zebrafish) (Brachydanio rerio) ABHD11 wbscr21-like .
ABHD12-PHARC :
danre-q08c93 Danio rerio (Zebrafish) (Brachydanio rerio) abhydrolase domain containing 12 .
ABHD13-BEM46 :
danre-q32ls6 Danio rerio (Zebrafish) (Brachydanio rerio) Alpha/beta hydrolase domain-containing protein 13 zgc:123286 .
ABHD16 :
danre-a9jr90 Danio rerio (Zebrafish) (Brachydanio rerio). Bat5l protein .
ABHD17-depalmitoylase :
danre-Q7ZVZ7 Danio rerio (Zebrafish) (Brachydanio rerio) similar to riken cdna 2210412d01 gene .
ABHD18 :
danre-q5czu3 Danio rerio (Zebrafish) (Brachydanio rerio) Zgc:110741 ,
danre-f1q676 Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein .
abh_upf0017 :
danre-abh2b Danio rerio (Zebrafish) (Brachydanio rerio) Abhydrolase domain-containing protein 2-B ,
danre-f1qq19 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein ,
danre-q66hu2 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:92800 ,
danre-Q802V6 Danio rerio (Zebrafish) (Brachydanio rerio) similar to abhydrolase domain containing 2 ,
danre-e7fb35 Danio rerio (Zebrafish) (Brachydanio rerio). Abhydrolase domain-containing 15a .
ACHE :
danre-ACHE Danio rerio AChE gene for acetylcholinesterase, exons 1-4 .
Acidic_Lipase :
danre-1llip Danio rerio (Zebrafish) (Brachydanio rerio) lipf similar to lipase A, LIPH .
ACPH_Peptidase_S9 :
danre-q1rlp3 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:136971 ,
danre-Q802D0 Danio rerio (Zebrafish) (Brachydanio rerio) similar to n-acylaminoacyl-peptide hydrolase (fragment) .
Acyl-CoA_Thioesterase :
danre-q5rh34 Danio rerio (Zebrafish) (Brachydanio rerio) similar to cytosolic Acyl-CoA amino acid n-acetyltransferase domain zgc:7765 ,
danre-q5rh35 Danio rerio (Zebrafish) (Brachydanio rerio) similar to cytosolic Acyl-CoA amino acid n-acetyltransferase domain ,
danre-q5rhg4 Danio rerio (Zebrafish) (Brachydanio rerio) similar to cytosolic Acyl-CoA amino acid n-acetyltransferase domain ,
danre-q5rhg5 Danio rerio (Zebrafish) (Brachydanio rerio) similar to cytosolic Acyl-CoA amino acid n-acetyltransferase domain ,
danre-q5spg7 Danio rerio (Zebrafish) (Brachydanio rerio) thioesterase. (fragment) ,
danre-q5spg8 Danio rerio (Zebrafish) (Brachydanio rerio) novel protein similar to vertebrate Acyl-CoA thioesterase family ,
danre-q5u3w6 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:101553 ,
danre-q6gmj5 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein (fragment) ,
danre-q6ph28 Danio rerio (Zebrafish) (Brachydanio rerio) loc402867 CoA amino acid n-acetyltransferase domain (zgc:77651) (fragment) .
Arb2_FAM172A :
danre-f172a Danio rerio (Zebrafish) (Brachydanio rerio). Protein FAM172A .
Arylacetamide_deacetylase :
danre-q6dkf1 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:92416 ,
danre-a0jme8 Danio rerio (Zebrafish) (Brachydanio rerio). Zgc:153038 ,
danre-e7ez27 Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein ,
danre-e7f2w1 Danio rerio (Zebrafish) (Brachydanio rerio). Arylacetamide deacetylase ,
danre-f1qid7 Danio rerio (Zebrafish) (Brachydanio rerio). Arylacetamide deacetylase-like 4 .
Carboxypeptidase_S10 :
danre-CPMac Danio rerio (Zebrafish) (Brachydanio rerio) similar to carboxypeptidase, vitellogenic-like ,
danre-prtp Danio rerio (Zebrafish) (Brachydanio rerio) protective protein for beta-galactosidase ,
danre-RISC Danio rerio (Zebrafish) (Brachydanio rerio) similar to retinoid-inducible serine caroboxypetidase .
Carb_B_Chordata :
danre-a0a0r4iu19.1 Danio rerio (Zebrafish) (Brachydanio rerio) Carboxylesterase 2b fragment n-term ,
danre-5cxest Danio rerio cDNA clone IMAGE:7042549, partial cds ,
danre-a9jrf7 Danio rerio (Zebrafish) (Brachydanio rerio) Si:ch211-93f2.1 protein ,
danre-e7ezq9 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein ,
danre-q5bji3 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein (fragment) .
CGI-58_ABHD5_ABHD4 :
danre-q568j2 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:110267 .
Cholesterol_esterase :
danre-2balip Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein ,
danre-q4qrh4 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:112377 ,
danre-Q6P004 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical cel.2 protein (fragment) (fragment) .
Cholinesterase-like :
danre-ACHEE Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein ,
danre-e7ff77 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein .
CIB-CCG1-interacting-factor-B :
danre-AAH53212 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein ,
danre-abhea Danio rerio (Zebrafish) (Brachydanio rerio) Abhydrolase domain-containing protein 14A .
CMBL :
danre-a7mbu9 Danio rerio (Zebrafish) (Brachydanio rerio). Zgc:171683 protein .
DPP4N_Peptidase_S9 :
danre-b0r1c4 Danio rerio (Zebrafish) (Brachydanio rerio) Si:dkey-81j5.3 ,
danre-b5ddz4 Danio rerio (Zebrafish) (Brachydanio rerio) Novel protein similar to H.sapiens DPP4, dipeptidyl-peptidase 4 (DPP4) ,
danre-e7f5r8 Danio rerio (Zebrafish) (Brachydanio rerio) Dipeptidyl-peptidase 6b ,
danre-q08br3 Danio rerio (Zebrafish) (Brachydanio rerio) Zgc:152900 .
Duf_829 :
danre-a3kpm9 Danio rerio (Zebrafish) (Brachydanio rerio) Novel protein ,
danre-tmm53 Danio rerio (Zebrafish) (Brachydanio rerio) Transmembrane protein 53 .
Epoxide_hydrolase :
danre-ephx1l Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein (fragment) ,
danre-hyep Danio rerio (Zebrafish) (Brachydanio rerio) similar to epoxide hydrolase 1, microsomal (xenobiotic) Zgc:56126 OTTDARG00000005675 ,
danre-q5prc6 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:101645 .
FSH1 :
danre-OVCA2 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:110011 .
Hepatic_Lipase :
danre-q7t359 Danio rerio (Zebrafish) (Brachydanio rerio) similar to lipase, hepatic .
Kynurenine-formamidase :
danre-afmid Danio rerio (Zebrafish) (Brachydanio rerio) Kynurenine formamidase .
LIDHydrolase :
danre-b3dii8 Danio rerio (Zebrafish) (Brachydanio rerio) Zgc:195062 .
Lipoprotein_Lipase :
danre-q6p2u2 Danio rerio (Zebrafish) (Brachydanio rerio) lipoprotein lipase ,
danre-Q803Y3 Danio rerio (Zebrafish) (Brachydanio rerio) similar to lipase, endothelial ,
danre-a0a0g2kru2 Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein ,
danre-f1qla7 Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein .
LYsophospholipase_carboxylesterase :
danre-q5czm6 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:110848 ,
danre-q6pbw8 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:73210 .
Maspardin-ACP33-SPG21_like :
danre-SPG21 Danio rerio clone RK047A3F07 acid cluster protein 33, SPG21, Maspardin mRNA, complete .
MEST-like :
danre-PEG1 Danio rerio (Zebrafish) (Zebra danio) epoxide hydrolase (EC 3.3.2.3)mesoderm specific transcript .
Monoglyceridelipase_lysophospholip :
danre-Q7ZWC2 Danio rerio (Zebrafish) (Brachydanio rerio) Monoglyceridelipase_lysophospholipase hypothetical protein .
Ndr_family :
danre-ndr3 Danio rerio (Zebrafish) (Brachydanio rerio) (Brachydanio rerio) similar to n-myc downstream regulated 3 ,
danre-ndrg2 Danio rerio (Zebrafish) (Brachydanio rerio) (ndgr2) zgc:101847 ,
danre-q1mti5 Danio rerio (Zebrafish) (Brachydanio rerio) novel protein similar to vertebrate ndrg family member 4 (ndrg4) ,
danre-q6a3p5 Danio rerio (Zebrafish) (Brachydanio rerio) n-myc downstream regulated gene 1 protein, ndrg1 zgc:63944 ,
danre-q6pc94 Danio rerio (Zebrafish) (Brachydanio rerio) n-myc downstream regulated gene 1, like ,
danre-q6tgx0 Danio rerio (Zebrafish) (Brachydanio rerio) ndrg family member 3 .
Neuroligin :
danre-1neur Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 1 ,
danre-32neur Danio rerio (Zebrafish) (Brachydanio rerio) novel protein similar to vertebrate neuroligin 3 (nlgn3) (fragment) ,
danre-d2x2g1 Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 2 ,
danre-d2x2g3 Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 3 ,
danre-d2x2g5 Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 4b ,
danre-nlgn2a Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 2a ,
danre-nlgn4a Danio rerio (Zebrafish) (Brachydanio rerio) Neuroligin 4a .
NLS3-Tex30 :
danre-kanl3 Danio rerio (Zebrafish) (Brachydanio rerio) Non-specific lethal 3 homolog, KIAA1310 homolog ,
danre-tex30 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein .
PAF-Acetylhydrolase :
danre-q6nyi7 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:77563 (platelet-activating factor acetylhydrolase, plasma (pla2g7) .
Palmitoyl-protein_thioesterase :
danre-PPT2 Danio rerio (Zebrafish) (Brachydanio rerio) similar to palmitoyl-protein thioesterase 2 ,
danre-q6nxd0 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:77118 ,
danre-q6pd98 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:66024 ,
danre-q7t3c4 Danio rerio (Zebrafish) (Brachydanio rerio) palmitoyl-protein thioesterase .
PC-sterol_acyltransferase :
danre-q6nyh6 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein pla2g15 .
Pectinacetylesterase-Notum :
danre-c5h5c4 Danio rerio (Zebrafish) (Brachydanio rerio) Notum3 ,
danre-e7f0z8 Danio rerio (Zebrafish) (Brachydanio rerio). Uncharacterized protein .
PGAP1 :
danre-srac1 Danio rerio (Zebrafish) (Brachydanio rerio) Protein SERAC1 .
Phospholipase :
danre-LIPH Danio rerio (Zebrafish) (Brachydanio rerio) zgc:91985 ,
danre-q6nyz4 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:77160 ,
danre-f1qtr2 Danio rerio (Zebrafish) (Brachydanio rerio). Lipase, member Ib .
PPase_methylesterase_euk :
danre-Q7ZV37 Danio rerio (Zebrafish) (Brachydanio rerio) similar to protein phosphatase methylesterase-1 .
Prolylcarboxypeptidase :
danre-f1q7g9 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein ,
danre-q5czt1 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:113564 ,
danre-q6dg46 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:91816 .
S9N_PPCE_Peptidase_S9 :
danre-q503e2 Danio rerio (Zebrafish) (Brachydanio rerio) hypothetical protein zgc:110670 .
SERHL :
danre-A2BGU9 Danio rerio (Zebrafish) (Brachydanio rerio) similar to kraken-like zgc:55804 .
Thioesterase :
danre-q29r98 Danio rerio (Zebrafish) (Brachydanio rerio) zgc:136926 .
Thyroglobulin :
danre-f1qfr0 Danio rerio (Zebrafish) (Brachydanio rerio) Uncharacterized protein .
Valacyclovir-hydrolase :
danre-h9gyq0 Danio rerio (Zebrafish) (Brachydanio rerio) Biphenyl hydrolase like ,
danre-Q7ZVE1 Danio rerio (Zebrafish) (Brachydanio rerio) similar to biphenyl hydrolase-like Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: danre-q4v960 Colored MSA for Palmitoyl-protein_thioesterase (raw)
MTDGCRPCVFIWAVLLLLPSVIMAYRPVILVHGLFGGPEQMEMLKKYIKR
SHPGTSVTAISLYNDNASLKPMWEQVDGFREAIRPIMERAKDGVHLICYS
QGGLICRGVLATLPHHNVHSVIFLSSPLAGQYGDSNYISKFFPSLVKSTL
YNGCYTTRGQKISSCSYWKDPHQIEKYLKYSVFLAPLNGEVETVHTKAWR
KNFLRIKTMVLLGGPDDGIIKPWQSSMFGFYNRNEKVINMEHQDYYISDS
FGLKTLNRRKAIVKCIVPGVKHDAWTTNHKIYKKCIERWLT
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M T D G C R P C V F I W A V L L L L P S V I M A Y R P V I L V H G L F G G P E Q M E M L K K Y I K R S H P G T S V T A I S L Y N D N A S L K P M W E Q V D G F R E A I R P I M E R A K D G V H L I C Y S Q G G L I C R G V L A T L P H H N V H S V I F L S S P L A G Q Y G D S N Y I S K F F P S L V K S T L Y N G C Y T T R G Q K I S S C S Y W K D P H Q I E K Y L K Y S V F L A P L N G E V E T V H T K A W R K N F L R I K T M V L L G G P D D G I I K P W Q S S M F G F Y N R N E K V I N M E H Q D Y Y I S D S F G L K T L N R R K A I V K C I V P G V K H D A W T T N H K I Y K K C I E R W L T
Reference
Title: Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequencesStrausberg RL , Feingold EA , Grouse LH , Derge JG , Klausner RD , Collins FS , Wagner L , Shenmen CM , Schuler GD and Marra MA <72 more author(s)> Strausberg RL , Feingold EA , Grouse LH , Derge JG , Klausner RD , Collins FS , Wagner L , Shenmen CM , Schuler GD , Altschul SF , Zeeberg B , Buetow KH , Schaefer CF , Bhat NK , Hopkins RF , Jordan H , Moore T , Max SI , Wang J , Hsieh F , Diatchenko L , Marusina K , Farmer AA , Rubin GM , Hong L , Stapleton M , Soares MB , Bonaldo MF , Casavant TL , Scheetz TE , Brownstein MJ , Usdin TB , Toshiyuki S , Carninci P , Prange C , Raha SS , Loquellano NA , Peters GJ , Abramson RD , Mullahy SJ , Bosak SA , McEwan PJ , McKernan KJ , Malek JA , Gunaratne PH , Richards S , Worley KC , Hale S , Garcia AM , Gay LJ , Hulyk SW , Villalon DK , Muzny DM , Sodergren EJ , Lu X , Gibbs RA , Fahey J , Helton E , Ketteman M , Madan A , Rodrigues S , Sanchez A , Whiting M , Young AC , Shevchenko Y , Bouffard GG , Blakesley RW , Touchman JW , Green ED , Dickson MC , Rodriguez AC , Grimwood J , Schmutz J , Myers RM , Butterfield YS , Krzywinski MI , Skalska U , Smailus DE , Schnerch A , Schein JE , Jones SJ , Marra MA (- 72) Ref: Proc Natl Acad Sci U S A, 99 :16899, 2002 : PubMed Abstract ESTHER: Strausberg_2002_Proc.Natl.Acad.Sci.U.S.A_99_16899 PubMedSearch: Strausberg 2002 Proc.Natl.Acad.Sci.U.S.A 99 16899 PubMedID: 12477932 Gene_locus related to this paper: bovin-q3zcj6 ,
danre-OVCA2 ,
danre-q4qrh4 ,
danre-q4v960 ,
danre-q32ls6 ,
danre-q503e2 ,
ratno-CPVL ,
ratno-q3mhs0 ,
ratno-q4qr68 ,
ratno-q5fvr5 ,
ratno-q32q55 ,
xenla-a2bd54 ,
xenla-q2tap9 ,
xenla-q3kq37 ,
xenla-q3kq76 ,
xenla-q4klb6 ,
xenla-q32n48 ,
xenla-q32ns5 ,
xenla-q52l41 ,
xentr-q4va73 ,
danre-a7mbu9 Abstract
The National Institutes of Health Mammalian Gene Collection (MGC) Program is a multiinstitutional effort to identify and sequence a cDNA clone containing a complete ORF for each human and mouse gene. ESTs were generated from libraries enriched for full-length cDNAs and analyzed to identify candidate full-ORF clones, which then were sequenced to high accuracy. The MGC has currently sequenced and verified the full ORF for a nonredundant set of >9,000 human and >6,000 mouse genes. Candidate full-ORF clones for an additional 7,800 human and 3,500 mouse genes also have been identified. All MGC sequences and clones are available without restriction through public databases and clone distribution networks (see http:mgc.nci.nih.gov).
Other Papers
