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Gene_locus Report for: hetga-g5bvp0

Heterocephalus glaber (Naked mole rat). Abhydrolase domain-containing protein 15

Relationship
Family|abh_upf0017
Block| X
Position in NCBI Life Tree|Heterocephalus glaber
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Mammalia: N E > Theria: N E > Eutheria: N E > Boreoeutheria: N E > Euarchontoglires: N E > Glires: N E > Rodentia: N E > Hystricomorpha: N E > Bathyergidae: N E > Heterocephalus: N E > Heterocephalus glaber: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : JH172092, XP_004857114
1 UniProt : G5BVP0
1 UniProt : G5BVP0
1 Interpro : G5BVP0
1 Prodom : G5BVP0
1 Pfam : G5BVP0
1 PIRSF : G5BVP0
1 SUPERFAM : G5BVP0
Sequence
Graphical view for this peptide sequence: hetga-g5bvp0
Colored MSA for abh_upf0017 (raw)
MPLWGAALALFLGALALLLLLVPRLVRTVGARTQPGALIQNDEVDGGGPE
DQFSDRRESLPGGCSLLCKPSALAQCLLRALRRSAALEPGPRPWLSGPHL
QTLCHFVLPVAPGPELAREYLQLADDGLVALDWVVGPCARGRRVTSAGGL
PAVLLVIPNAWGRLTRNVLGLCLLALERGYYPVIFHRRGHHGCPLVSPRL
QPFGDPSDLKEAVTYIRFRHPAAPLFAVSEGSGSALLLSYLGECGSSSYM
TGAACISPVLRCREWFEAGLPWPYERGFLLYQKIALSRYATALEDTVDTS
KLFKSRSLREFEETLFCHTKSFPISWDTYWDRNDPLRDVDEAAVPVLCIC
SADDPVSGPPDHTLPTELFHSNPYFFLLLSRHGGHCGFLRQEPLPAWSHE
VILESFRALTEFFRMEERMKGLSRHRTSFLGGCRRWGILQKREVSPSSNL
EEIFSWKRSYTR
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPLWGAALALFLGALALLLLLVPRLVRTVGARTQPGALIQNDEVDGGGPE
DQFSDRRESLPGGCSLLCKPSALAQCLLRALRRSAALEPGPRPWLSGPHL
QTLCHFVLPVAPGPELAREYLQLADDGLVALDWVVGPCARGRRVTSAGGL
PAVLLVIPNAWGRLTRNVLGLCLLALERGYYPVIFHRRGHHGCPLVSPRL
QPFGDPSDLKEAVTYIRFRHPAAPLFAVSEGSGSALLLSYLGECGSSSYM
TGAACISPVLRCREWFEAGLPWPYERGFLLYQKIALSRYATALEDTVDTS
KLFKSRSLREFEETLFCHTKSFPISWDTYWDRNDPLRDVDEAAVPVLCIC
SADDPVSGPPDHTLPTELFHSNPYFFLLLSRHGGHCGFLRQEPLPAWSHE
VILESFRALTEFFRMEERMKGLSRHRTSFLGGCRRWGILQKREVSPSSNL
EEIFSWKRSYTR


Reference
    Title: Genome sequencing reveals insights into physiology and longevity of the naked mole rat
    Kim EB, Fang X, Fushan AA, Huang Z, Lobanov AV, Han L, Marino SM, Sun X, Turanov AA and Gladyshev VN <26 more author(s)>
    Ref: Nature, 479:223, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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