Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: micpc-c1mhj0

Micromonas pusilla (strain CCMP1545) (Picoplanktonic green alga) Predicted protein

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Micromonas pusilla
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Chlorophyta: N E > prasinophytes: N E > Mamiellophyceae: N E > Mamiellales: N E > Mamiellaceae: N E > Micromonas: N E > Micromonas pusilla: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : GG663735
1 UniProt : C1MHJ0
1 UniProt : C1MHJ0
1 Interpro : C1MHJ0
1 Pfam : C1MHJ0
1 PIRSF : C1MHJ0
1 SUPERFAM : C1MHJ0
Sequence
Graphical view for this peptide sequence: micpc-c1mhj0
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MATVPVPTASFARPRRRYPDLAGATLGPSRSCKFGNVTRASASSTASTTV
ETGAGLKLEILSQKAAGGATKAPMLFVHGSYHAAWCWTVHFFDYFSARGH
DCYAVSLRGQGGSDVPSGVAVAGTLEEHAADVKDACAFVSKASGAPPILV
GHSFGGLVCQRLFTGEPPPLSGLALLASVPPSGNGEMVKRFLKRSFIASM
KITYAFIAGAFKTNEKLCRECFFSDDLPDAELKTHMGSIATSCRVRLLDL
KALNDSLPIPRPIPGSPPVCVIGGENDFVVDVEGVAECAEWGGVDPVVLP
RAAHDLMIDTRWEACAQALAKFATRVGRKGE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MATVPVPTASFARPRRRYPDLAGATLGPSRSCKFGNVTRASASSTASTTV
ETGAGLKLEILSQKAAGGATKAPMLFVHGSYHAAWCWTVHFFDYFSARGH
DCYAVSLRGQGGSDVPSGVAVAGTLEEHAADVKDACAFVSKASGAPPILV
GHSFGGLVCQRLFTGEPPPLSGLALLASVPPSGNGEMVKRFLKRSFIASM
KITYAFIAGAFKTNEKLCRECFFSDDLPDAELKTHMGSIATSCRVRLLDL
KALNDSLPIPRPIPGSPPVCVIGGENDFVVDVEGVAECAEWGGVDPVVLP
RAAHDLMIDTRWEACAQALAKFATRVGRKGE


Reference
    Title: Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
    Worden AZ, Lee JH, Mock T, Rouze P, Simmons MP, Aerts AL, Allen AE, Cuvelier ML, Derelle E and Grigoriev IV <41 more author(s)>
    Ref: Science, 324:268, 2009 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer