Gene_locus Report for: mizye-a0a210q110 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Liver carboxylesterase 2
Comment
long stretch of T Threonine at the C-term excluded here Active site serine missing Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Bivalvia: N E > Pteriomorphia: N E > Pectinoida: N E > Pectinoidea: N E > Pectinidae: N E > Mizuhopecten: N E > Mizuhopecten yessoensis: N E A85-EsteraseD-FGH :
mizye-a0a210pwl7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). S-formylglutathione hydrolase .
ABHD8 :
mizye-a0a210q332 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 8 .
ABHD12-PHARC :
mizye-a0a210qyk8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Oxidized phosphatidylserine lipase ABHD12 .
ABHD13-BEM46 :
mizye-a0a210pij5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Alpha/beta hydrolase domain-containing protein 13 .
abh_upf0017 :
mizye-a0a210pqn0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 ,
mizye-a0a210q7t5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 .
ACHE :
mizye-a0a210qls6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-5989.14.1 ,
mizye-a0a210qis3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7021.7 ,
mizye-a0a210qg00 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7653.1 .
Carb_B_Mollusca :
mizye-a0a210pu25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-10985.38 ,
mizye-a0a210pek1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pul3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pum3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptr6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.15 ,
mizye-a0a210ptq5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptc4.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptc4.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptv1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.9 ,
mizye-a0a210ptv7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qgl6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg90 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptq0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.11 ,
mizye-a0a210qg72 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptb1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pjd3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg92 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q8v2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg93 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q160.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210q160.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210qes4 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pk25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q1b8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210r503 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-P021348901.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 ,
mizye-P021348901.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 PYE-3431.12 .
Neuroligin :
mizye-a0a210r5n9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).Neuroligin PYE-431.60 ,
mizye-a0a210qbv2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Neuroligin PYE-8469.10 .
PAF-Acetylhydrolase :
mizye-a0a210q8u5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). 1-alkyl-2-acetylglycerophosphocholine esterase .
Pancreatic_lipase :
mizye-a0a210ped6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic triacylglycerol lipase ,
mizye-a0a210q4h5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4h9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4j1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210qf86 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic lipase-related protein 2 Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: mizye-a0a210q110 Colored MSA for Carb_B_Mollusca (raw)
MTMHCTVFFVAAIATLARGRESSIVNTDMGTLRGFAIPAKNNEKRGIVHS
FLNIPYAKSPEGDLAFKKPQEYGPWTGVRDATVDGPVCIQGYKFPGPQSF
PEAIDCLTLDIRVPHNVSRSNNLPVIIWIHGGGYFFGGTRYTDASVFSVL
SNTIVVTFNFRLGIYGLLSTEDAECPGNFALWDQKMAIEWVNKYIAAFGG
DPSRTTLLGHATGANAISHHAMMPDNIGRFQRVILMSGSATQPGDCIANP
RKNLIKLNAEIKCGDYTEENLDTKAFMACIRSKTPDQLVASITTYAEKLM
TQLNAIKIDIFLGVVVDGDFIRDFPSRILADKKSPEYSMFRSLDVLAGNV
EQEGSIVASLLVGDMRTRWNLTETIEFSTDFMCQELAPIIAKDLYNVTSP
NATQAVCDRYTVEGGNDVNILNQSIAFSNMYGDVLYVAPVVEILKMHSRD
NLETSTYQYIMKKEYPYGYYFGRWPWQFGVGQGHDLSYLFDVYAYPYMMV
EEDLDMSLKVITWFANFARNGDPNSANPNVTWPRYTYAEKAYLDLDVVSV
PQKNLWPERMNFWLDTFPRLVAAILAPP
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M T M H C T V F F V A A I A T L A R G R E S S I V N T D M G T L R G F A I P A K N N E K R G I V H S F L N I P Y A K S P E G D L A F K K P Q E Y G P W T G V R D A T V D G P V C I Q G Y K F P G P Q S F P E A I D C L T L D I R V P H N V S R S N N L P V I I W I H G G G Y F F G G T R Y T D A S V F S V L S N T I V V T F N F R L G I Y G L L S T E D A E C P G N F A L W D Q K M A I E W V N K Y I A A F G G D P S R T T L L G H A T G A N A I S H H A M M P D N I G R F Q R V I L M S G S A T Q P G D C I A N P R K N L I K L N A E I K C G D Y T E E N L D T K A F M A C I R S K T P D Q L V A S I T T Y A E K L M T Q L N A I K I D I F L G V V V D G D F I R D F P S R I L A D K K S P E Y S M F R S L D V L A G N V E Q E G S I V A S L L V G D M R T R W N L T E T I E F S T D F M C Q E L A P I I A K D L Y N V T S P N A T Q A V C D R Y T V E G G N D V N I L N Q S I A F S N M Y G D V L Y V A P V V E I L K M H S R D N L E T S T Y Q Y I M K K E Y P Y G Y Y F G R W P W Q F G V G Q G H D L S Y L F D V Y A Y P Y M M V E E D L D M S L K V I T W F A N F A R N G D P N S A N P N V T W P R Y T Y A E K A Y L D L D V V S V P Q K N L W P E R M N F W L D T F P R L V A A I L A P P
Reference
Title: Scallop genome provides insights into evolution of bilaterian karyotype and developmentWang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B and Bao Z <42 more author(s)> Wang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B , Zhang L , Hu X , Sun X , Wang J , Zhao C , Wang Y , Wang D , Huang X , Wang R , Lv J , Li Y , Zhang Z , Liu B , Lu W , Hui Y , Liang J , Zhou Z , Hou R , Li X , Liu Y , Li H , Ning X , Lin Y , Zhao L , Xing Q , Dou J , Mao J , Guo H , Dou H , Li T , Mu C , Jiang W , Fu Q , Fu X , Miao Y , Liu J , Yu Q , Li R , Liao H , Kong Y , Jiang Z , Chourrout D , Bao Z (- 42) Ref: Nat Ecol Evol, 1 :120, 2017 : PubMed Abstract ESTHER: Wang_2017_Nat.Ecol.Evol_1_120 PubMedSearch: Wang 2017 Nat.Ecol.Evol 1 120 PubMedID: 28812685 Gene_locus related to this paper: mizye-a0a210qls6 ,
mizye-a0a210qis3 ,
mizye-a0a210qg00 ,
mizye-a0a210ped6 ,
mizye-a0a210q4h5 ,
mizye-a0a210q4h9 ,
mizye-a0a210q4j1 ,
mizye-a0a210qf86 ,
mizye-a0a210q332 ,
mizye-a0a210pqn0 ,
mizye-a0a210q7t5 ,
mizye-a0a210pij5 ,
mizye-a0a210qyk8 ,
mizye-a0a210pwl7 ,
mizye-a0a210q8u5 ,
mizye-a0a210r5n9 ,
mizye-a0a210qbv2 ,
mizye-a0a210pu25 ,
mizye-a0a210pek1 ,
mizye-a0a210pul3 ,
mizye-a0a210pum3 ,
mizye-a0a210ptr6 ,
mizye-a0a210ptq5 ,
mizye-a0a210ptc4.1 ,
mizye-a0a210ptc4.2 ,
mizye-a0a210ptv1 ,
mizye-a0a210ptv7 ,
mizye-a0a210qgl6 ,
mizye-a0a210qg90 ,
mizye-a0a210ptq0 ,
mizye-a0a210qg72 ,
mizye-a0a210ptb1 ,
mizye-a0a210pjd3 ,
mizye-a0a210qg92 ,
mizye-a0a210q8v2 ,
mizye-a0a210qg93 ,
mizye-a0a210q160.1 ,
mizye-a0a210q160.2 ,
mizye-a0a210qes4 ,
mizye-a0a210pk25 ,
mizye-a0a210q1b8 ,
mizye-a0a210q110 ,
mizye-a0a210r503 ,
mizye-P021348901.1 ,
mizye-P021348901.2 Abstract
Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical. Here we report a high-quality, chromosome-anchored reference genome for the scallop Patinopecten yessoensis, a bivalve mollusc that has a slow-evolving genome with many ancestral features. Chromosome-based macrosynteny analysis reveals a striking correspondence between the 19 scallop chromosomes and the 17 presumed ancestral bilaterian linkage groups at a level of conservation previously unseen, suggesting that the scallop may have a karyotype close to that of the bilaterian ancestor. Scallop Hox gene expression follows a new mode of subcluster temporal co-linearity that is possibly ancestral and may provide great potential in supporting diverse bilaterian body plans. Transcriptome analysis of scallop mantle eyes finds unexpected diversity in phototransduction cascades and a potentially ancient Pax2/5/8-dependent pathway for noncephalic eyes. The outstanding preservation of ancestral karyotype and developmental control makes the scallop genome a valuable resource for understanding early bilaterian evolution and biology.
Other Papers
