Gene_locus Report for: mizye-a0a210q160.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened)
Comment
two genes concatened Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Bivalvia: N E > Pteriomorphia: N E > Pectinoida: N E > Pectinoidea: N E > Pectinidae: N E > Mizuhopecten: N E > Mizuhopecten yessoensis: N E A85-EsteraseD-FGH :
mizye-a0a210pwl7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). S-formylglutathione hydrolase .
ABHD8 :
mizye-a0a210q332 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 8 .
ABHD12-PHARC :
mizye-a0a210qyk8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Oxidized phosphatidylserine lipase ABHD12 .
ABHD13-BEM46 :
mizye-a0a210pij5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Alpha/beta hydrolase domain-containing protein 13 .
abh_upf0017 :
mizye-a0a210pqn0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 ,
mizye-a0a210q7t5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 .
ACHE :
mizye-a0a210qls6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-5989.14.1 ,
mizye-a0a210qis3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7021.7 ,
mizye-a0a210qg00 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7653.1 .
Carb_B_Mollusca :
mizye-a0a210pu25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-10985.38 ,
mizye-a0a210pek1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pul3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pum3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptr6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.15 ,
mizye-a0a210ptq5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptc4.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptc4.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptv1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.9 ,
mizye-a0a210ptv7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qgl6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg90 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptq0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.11 ,
mizye-a0a210qg72 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptb1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pjd3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg92 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q8v2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg93 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q160.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210qes4 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pk25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q1b8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q110 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Liver carboxylesterase 2 ,
mizye-a0a210r503 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-P021348901.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 ,
mizye-P021348901.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 PYE-3431.12 .
Neuroligin :
mizye-a0a210r5n9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).Neuroligin PYE-431.60 ,
mizye-a0a210qbv2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Neuroligin PYE-8469.10 .
PAF-Acetylhydrolase :
mizye-a0a210q8u5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). 1-alkyl-2-acetylglycerophosphocholine esterase .
Pancreatic_lipase :
mizye-a0a210ped6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic triacylglycerol lipase ,
mizye-a0a210q4h5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4h9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4j1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210qf86 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic lipase-related protein 2 Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: mizye-a0a210q160.2 Colored MSA for Carb_B_Mollusca (raw)
TLKKDLSAQSLTSSYKHGVSEKTLKHCLLLELIIRISLTMESVQYIGMIF
VMVHSMTATNTHPDGVITTTYGAIQGKVVTVRNESVYQFLKVPFAKPPLG
NLRFQKPERPDSWNGTRNAVHYGPPCMQRLLTRYKNILEDSTVSEDCLYL
NVYVPGRIDVNANLSVMVYIHGGGYKTKTASLFDGSFLAQSGNVIVIIPN
YRLGFFGFLSTEDEAAKGNYGLWDQIFCLRWVQENIKFFGGNPAKVTMFG
HSAGGYSIGLLLLSAETKDLFRRAIPMSGFGLSPRAITHKPRMATIRLAT
KLGCIPTGWDSTDMSILTDCMRNKTAHELLDGQNKIVAEDSSSPHFIMRP
APVIDKEILMDTPHRIMYNPDSDGSRRYVSADYMTGTNSADGGLIRSYLK
VIQTRYNFTLSDGAPTIALCDSIAPALARDYYASSVRIANAICASYTSDG
TLADQARRLVNLFGDMMYDSRTVQTLRRHILGNPRSFQFILSHKSSFVTT
PGLPPWLTGAYHGDELAYIFGQASHNFSSSERDLSAAMMTYLTNFAKFGN
PNGDNSTSTSLPVWPQFEQEQEQYMDFDLNLTIRDHLHRNMVKFWLETVP
ALNKTGDGAVSMATMSRPLLWSQLLSCFVLVLNLKI
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
T L K K D L S A Q S L T S S Y K H G V S E K T L K H C L L L E L I I R I S L T M E S V Q Y I G M I F V M V H S M T A T N T H P D G V I T T T Y G A I Q G K V V T V R N E S V Y Q F L K V P F A K P P L G N L R F Q K P E R P D S W N G T R N A V H Y G P P C M Q R L L T R Y K N I L E D S T V S E D C L Y L N V Y V P G R I D V N A N L S V M V Y I H G G G Y K T K T A S L F D G S F L A Q S G N V I V I I P N Y R L G F F G F L S T E D E A A K G N Y G L W D Q I F C L R W V Q E N I K F F G G N P A K V T M F G H S A G G Y S I G L L L L S A E T K D L F R R A I P M S G F G L S P R A I T H K P R M A T I R L A T K L G C I P T G W D S T D M S I L T D C M R N K T A H E L L D G Q N K I V A E D S S S P H F I M R P A P V I D K E I L M D T P H R I M Y N P D S D G S R R Y V S A D Y M T G T N S A D G G L I R S Y L K V I Q T R Y N F T L S D G A P T I A L C D S I A P A L A R D Y Y A S S V R I A N A I C A S Y T S D G T L A D Q A R R L V N L F G D M M Y D S R T V Q T L R R H I L G N P R S F Q F I L S H K S S F V T T P G L P P W L T G A Y H G D E L A Y I F G Q A S H N F S S S E R D L S A A M M T Y L T N F A K F G N P N G D N S T S T S L P V W P Q F E Q E Q E Q Y M D F D L N L T I R D H L H R N M V K F W L E T V P A L N K T G D G A V S M A T M S R P L L W S Q L L S C F V L V L N L K I
Reference
Title: Scallop genome provides insights into evolution of bilaterian karyotype and developmentWang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B and Bao Z <42 more author(s)> Wang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B , Zhang L , Hu X , Sun X , Wang J , Zhao C , Wang Y , Wang D , Huang X , Wang R , Lv J , Li Y , Zhang Z , Liu B , Lu W , Hui Y , Liang J , Zhou Z , Hou R , Li X , Liu Y , Li H , Ning X , Lin Y , Zhao L , Xing Q , Dou J , Mao J , Guo H , Dou H , Li T , Mu C , Jiang W , Fu Q , Fu X , Miao Y , Liu J , Yu Q , Li R , Liao H , Kong Y , Jiang Z , Chourrout D , Bao Z (- 42) Ref: Nat Ecol Evol, 1 :120, 2017 : PubMed Abstract ESTHER: Wang_2017_Nat.Ecol.Evol_1_120 PubMedSearch: Wang 2017 Nat.Ecol.Evol 1 120 PubMedID: 28812685 Gene_locus related to this paper: mizye-a0a210qls6 ,
mizye-a0a210qis3 ,
mizye-a0a210qg00 ,
mizye-a0a210ped6 ,
mizye-a0a210q4h5 ,
mizye-a0a210q4h9 ,
mizye-a0a210q4j1 ,
mizye-a0a210qf86 ,
mizye-a0a210q332 ,
mizye-a0a210pqn0 ,
mizye-a0a210q7t5 ,
mizye-a0a210pij5 ,
mizye-a0a210qyk8 ,
mizye-a0a210pwl7 ,
mizye-a0a210q8u5 ,
mizye-a0a210r5n9 ,
mizye-a0a210qbv2 ,
mizye-a0a210pu25 ,
mizye-a0a210pek1 ,
mizye-a0a210pul3 ,
mizye-a0a210pum3 ,
mizye-a0a210ptr6 ,
mizye-a0a210ptq5 ,
mizye-a0a210ptc4.1 ,
mizye-a0a210ptc4.2 ,
mizye-a0a210ptv1 ,
mizye-a0a210ptv7 ,
mizye-a0a210qgl6 ,
mizye-a0a210qg90 ,
mizye-a0a210ptq0 ,
mizye-a0a210qg72 ,
mizye-a0a210ptb1 ,
mizye-a0a210pjd3 ,
mizye-a0a210qg92 ,
mizye-a0a210q8v2 ,
mizye-a0a210qg93 ,
mizye-a0a210q160.1 ,
mizye-a0a210q160.2 ,
mizye-a0a210qes4 ,
mizye-a0a210pk25 ,
mizye-a0a210q1b8 ,
mizye-a0a210q110 ,
mizye-a0a210r503 ,
mizye-P021348901.1 ,
mizye-P021348901.2 Abstract
Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical. Here we report a high-quality, chromosome-anchored reference genome for the scallop Patinopecten yessoensis, a bivalve mollusc that has a slow-evolving genome with many ancestral features. Chromosome-based macrosynteny analysis reveals a striking correspondence between the 19 scallop chromosomes and the 17 presumed ancestral bilaterian linkage groups at a level of conservation previously unseen, suggesting that the scallop may have a karyotype close to that of the bilaterian ancestor. Scallop Hox gene expression follows a new mode of subcluster temporal co-linearity that is possibly ancestral and may provide great potential in supporting diverse bilaterian body plans. Transcriptome analysis of scallop mantle eyes finds unexpected diversity in phototransduction cascades and a potentially ancient Pax2/5/8-dependent pathway for noncephalic eyes. The outstanding preservation of ancestral karyotype and developmental control makes the scallop genome a valuable resource for understanding early bilaterian evolution and biology.
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