Riedel_2013_Stand.Genomic.Sci_8_389

Reference

Title : Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements - Riedel_2013_Stand.Genomic.Sci_8_389
Author(s) : Riedel T , Teshima H , Petersen J , Fiebig A , Davenport K , Daligault H , Erkkila T , Gu W , Munk C , Xu Y , Chen A , Pati A , Ivanova N , Goodwin LA , Chain P , Detter JC , Rohde M , Gronow S , Kyrpides NC , Woyke T , Goker M , Brinkhoff T , Klenk HP
Ref : Stand Genomic Sci , 8 :389 , 2013
Abstract :

Leisingera aquimarina Vandecandelaere et al. 2008 is a member of the genomically well characterized Roseobacter clade within the family Rhodobacteraceae. Representatives of the marine Roseobacter clade are metabolically versatile and involved in carbon fixation and biogeochemical processes. They form a physiologically heterogeneous group, found predominantly in coastal or polar waters, especially in symbiosis with algae, in microbial mats, in sediments or associated with invertebrates. Here we describe the features of L. aquimarina DSM 24565(T) together with the permanent-draft genome sequence and annotation. The 5,344,253 bp long genome consists of one chromosome and an unusually high number of seven extrachromosomal elements and contains 5,129 protein-coding and 89 RNA genes. It was sequenced as part of the DOE Joint Genome Institute Community Sequencing Program 2010 and of the activities of the Transregional Collaborative Research Centre 51 funded by the German Research Foundation (DFG).

PubMedSearch : Riedel_2013_Stand.Genomic.Sci_8_389
PubMedID: 24501625

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Riedel T, Teshima H, Petersen J, Fiebig A, Davenport K, Daligault H, Erkkila T, Gu W, Munk C, Xu Y, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Goker M, Brinkhoff T, Klenk HP (2013)
Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements
Stand Genomic Sci 8 :389

Riedel T, Teshima H, Petersen J, Fiebig A, Davenport K, Daligault H, Erkkila T, Gu W, Munk C, Xu Y, Chen A, Pati A, Ivanova N, Goodwin LA, Chain P, Detter JC, Rohde M, Gronow S, Kyrpides NC, Woyke T, Goker M, Brinkhoff T, Klenk HP (2013)
Stand Genomic Sci 8 :389