Teshima H

References (23)

Title : Complete genome sequences for 59 burkholderia isolates, both pathogenic and near neighbor - Johnson_2015_Genome.Announc_3_
Author(s) : Johnson SL , Bishop-Lilly KA , Ladner JT , Daligault HE , Davenport KW , Jaissle J , Frey KG , Koroleva GI , Bruce DC , Coyne SR , Broomall SM , Li PE , Teshima H , Gibbons HS , Palacios GF , Rosenzweig CN , Redden CL , Xu Y , Minogue TD , Chain PS
Ref : Genome Announc , 3 : , 2015
Abstract :
PubMedSearch : Johnson_2015_Genome.Announc_3_
PubMedID: 25931592

Title : Finished Genome Sequence of Bacillus cereus Strain 03BB87, a Clinical Isolate with B. anthracis Virulence Genes - Johnson_2015_Genome.Announc_3_0
Author(s) : Johnson SL , Minogue TD , Teshima H , Davenport KW , Shea AA , Miner HL , Wolcott MJ , Chain PS
Ref : Genome Announc , 3 : , 2015
Abstract :
PubMedSearch : Johnson_2015_Genome.Announc_3_0
PubMedID: 25593267
Gene_locus related to this paper: bacco-g2th77 , 9burk-a0a0d5v6j6 , 9burk-a0a0d5vg46 , bacmb-a0a0b6amr7 , 9gamm-a0a0b6d7n3 , 9gamm-a0a0e1n4r5 , 9gamm-c6yvf8 , 9burk-a0a0d5lcs9

Title : Genomic sequences of six botulinum neurotoxin-producing strains representing three clostridial species illustrate the mobility and diversity of botulinum neurotoxin genes - Smith_2015_Infect.Genet.Evol_30_102
Author(s) : Smith TJ , Hill KK , Xie G , Foley BT , Williamson CH , Foster JT , Johnson SL , Chertkov O , Teshima H , Gibbons HS , Johnsky LA , Karavis MA , Smith LA
Ref : Infect Genet Evol , 30 :102 , 2015
Abstract :
PubMedSearch : Smith_2015_Infect.Genet.Evol_30_102
PubMedID: 25489752
Gene_locus related to this paper: 9clot-a0a0c1u9k6

Title : Complete genome sequence of Dehalobacter restrictus PER-K23(T.) - Kruse_2013_Stand.Genomic.Sci_8_375
Author(s) : Kruse T , Maillard J , Goodwin L , Woyke T , Teshima H , Bruce D , Detter C , Tapia R , Han C , Huntemann M , Wei CL , Han J , Chen A , Kyrpides N , Szeto E , Markowitz V , Ivanova N , Pagani I , Pati A , Pitluck S , Nolan M , Holliger C , Smidt H
Ref : Stand Genomic Sci , 8 :375 , 2013
Abstract :
PubMedSearch : Kruse_2013_Stand.Genomic.Sci_8_375
PubMedID: 24501624
Gene_locus related to this paper: 9firm-w0ejt1 , 9firm-w0ekb3

Title : Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin - Murugapiran_2013_Genome.Announc_1_e00106
Author(s) : Murugapiran SK , Huntemann M , Wei CL , Han J , Detter JC , Han CS , Erkkila TH , Teshima H , Chen A , Kyrpides N , Mavrommatis K , Markowitz V , Szeto E , Ivanova N , Pagani I , Lam J , McDonald AI , Dodsworth JA , Pati A , Goodwin L , Peters L , Pitluck S , Woyke T , Hedlund BP
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Murugapiran_2013_Genome.Announc_1_e00106
PubMedID: 23405355
Gene_locus related to this paper: thet2-q72hz1 , thet2-q72j75 , theth-TTC1787 , theos-k7r7w9 , theos-k7r725 , theth-h9zpz9 , theos-k7riw9 , theos-k7qw42 , theos-k7r3i4

Title : Draft genome sequence of Frankia sp. strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida - Sen_2013_Genome.Announc_1_e0010313
Author(s) : Sen A , Beauchemin N , Bruce D , Chain P , Chen A , Walston Davenport K , Deshpande S , Detter C , Furnholm T , Ghodbhane-Gtari F , Goodwin L , Gtari M , Han C , Han J , Huntemann M , Ivanova N , Kyrpides N , Land ML , Markowitz V , Mavrommatis K , Nolan M , Nouioui I , Pagani I , Pati A , Pitluck S , Santos CL , Sur S , Szeto E , Tavares F , Teshima H , Thakur S , Wall L , Woyke T , Wishart J , Tisa LS
Ref : Genome Announc , 1 :e0010313 , 2013
Abstract :
PubMedSearch : Sen_2013_Genome.Announc_1_e0010313
PubMedID: 23516220
Gene_locus related to this paper: 9acto-i8qvq8 , 9actn-i8qfl2

Title : Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements - Riedel_2013_Stand.Genomic.Sci_8_389
Author(s) : Riedel T , Teshima H , Petersen J , Fiebig A , Davenport K , Daligault H , Erkkila T , Gu W , Munk C , Xu Y , Chen A , Pati A , Ivanova N , Goodwin LA , Chain P , Detter JC , Rohde M , Gronow S , Kyrpides NC , Woyke T , Goker M , Brinkhoff T , Klenk HP
Ref : Stand Genomic Sci , 8 :389 , 2013
Abstract :
PubMedSearch : Riedel_2013_Stand.Genomic.Sci_8_389
PubMedID: 24501625

Title : Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens - Aylward_2013_Genome.Announc_1_e0023912
Author(s) : Aylward FO , Tremmel DM , Starrett GJ , Bruce DC , Chain P , Chen A , Davenport KW , Detter C , Han CS , Han J , Huntemann M , Ivanova NN , Kyrpides NC , Markowitz V , Mavrommatis K , Nolan M , Pagani I , Pati A , Pitluck S , Teshima H , Deshpande S , Goodwin L , Woyke T , Currie CR
Ref : Genome Announc , 1 :e0023912 , 2013
Abstract :
PubMedSearch : Aylward_2013_Genome.Announc_1_e0023912
PubMedID: 23516234
Gene_locus related to this paper: serma-l0mn97 , serma-l0mh84 , serma-l0mif0

Title : Draft genome sequence of Frankia sp. strain CN3, an atypical, noninfective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis - Ghodhbane-Gtari_2013_Genome.Announc_1_e0008513
Author(s) : Ghodhbane-Gtari F , Beauchemin N , Bruce D , Chain P , Chen A , Walston Davenport K , Deshpande S , Detter C , Furnholm T , Goodwin L , Gtari M , Han C , Han J , Huntemann M , Ivanova N , Kyrpides N , Land ML , Markowitz V , Mavrommatis K , Nolan M , Nouioui I , Pagani I , Pati A , Pitluck S , Santos CL , Sen A , Sur S , Szeto E , Tavares F , Teshima H , Thakur S , Wall L , Woyke T , Tisa LS
Ref : Genome Announc , 1 :e0008513 , 2013
Abstract :
PubMedSearch : Ghodhbane-Gtari_2013_Genome.Announc_1_e0008513
PubMedID: 23516212
Gene_locus related to this paper: 9acto-g6hh93

Title : Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift - Liolos_2013_Stand.Genomic.Sci_8_165
Author(s) : Liolos K , Abt B , Scheuner C , Teshima H , Held B , Lapidus A , Nolan M , Lucas S , Deshpande S , Cheng JF , Tapia R , Goodwin LA , Pitluck S , Pagani I , Ivanova N , Mavromatis K , Mikhailova N , Huntemann M , Pati A , Chen A , Palaniappan K , Land M , Rohde M , Tindall BJ , Detter JC , Goker M , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Woyke T , Klenk HP , Kyrpides NC
Ref : Stand Genomic Sci , 8 :165 , 2013
Abstract :
PubMedSearch : Liolos_2013_Stand.Genomic.Sci_8_165
PubMedID: 23991249
Gene_locus related to this paper: spiaz-h9uj53

Title : Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T - Pester_2012_J.Bacteriol_194_6300
Author(s) : Pester M , Brambilla E , Alazard D , Rattei T , Weinmaier T , Han J , Lucas S , Lapidus A , Cheng JF , Goodwin L , Pitluck S , Peters L , Ovchinnikova G , Teshima H , Detter JC , Han CS , Tapia R , Land ML , Hauser L , Kyrpides NC , Ivanova NN , Pagani I , Huntmann M , Wei CL , Davenport KW , Daligault H , Chain PS , Chen A , Mavromatis K , Markowitz V , Szeto E , Mikhailova N , Pati A , Wagner M , Woyke T , Ollivier B , Klenk HP , Spring S , Loy A
Ref : Journal of Bacteriology , 194 :6300 , 2012
Abstract :
PubMedSearch : Pester_2012_J.Bacteriol_194_6300
PubMedID: 23105050
Gene_locus related to this paper: desaj-i4dc82 , desmd-j7j1v2 , desod-g7wg97 , desaj-i4d5q8

Title : Complete genome sequence of Halopiger xanaduensis type strain (SH-6(T)) - Anderson_2012_Stand.Genomic.Sci_6_31
Author(s) : Anderson I , Tindall BJ , Rohde M , Lucas S , Han J , Lapidus A , Cheng JF , Goodwin L , Pitluck S , Peters L , Pati A , Mikhailova N , Pagani I , Teshima H , Han C , Tapia R , Land M , Woyke T , Klenk HP , Kyrpides N , Ivanova N
Ref : Stand Genomic Sci , 6 :31 , 2012
Abstract :
PubMedSearch : Anderson_2012_Stand.Genomic.Sci_6_31
PubMedID: 22675596
Gene_locus related to this paper: halxs-f8dda6

Title : Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date - Zhaxybayeva_2012_Genome.Biol.Evol_4_700
Author(s) : Zhaxybayeva O , Swithers KS , Foght J , Green AG , Bruce D , Detter C , Han S , Teshima H , Han J , Woyke T , Pitluck S , Nolan M , Ivanova N , Pati A , Land ML , Dlutek M , Doolittle WF , Noll KM , Nesbo CL
Ref : Genome Biol Evol , 4 :700 , 2012
Abstract :
PubMedSearch : Zhaxybayeva_2012_Genome.Biol.Evol_4_700
PubMedID: 22798451
Gene_locus related to this paper: 9bact-i2f5c1 , 9bact-i2f6q4

Title : Genomic comparison of Escherichia coli O104:H4 isolates from 2009 and 2011 reveals plasmid, and prophage heterogeneity, including shiga toxin encoding phage stx2 - Ahmed_2012_PLoS.One_7_e48228
Author(s) : Ahmed SA , Awosika J , Baldwin C , Bishop-Lilly KA , Biswas B , Broomall S , Chain PS , Chertkov O , Chokoshvili O , Coyne S , Davenport K , Detter JC , Dorman W , Erkkila TH , Folster JP , Frey KG , George M , Gleasner C , Henry M , Hill KK , Hubbard K , Insalaco J , Johnson S , Kitzmiller A , Krepps M , Lo CC , Luu T , McNew LA , Minogue T , Munk CA , Osborne B , Patel M , Reitenga KG , Rosenzweig CN , Shea A , Shen X , Strockbine N , Tarr C , Teshima H , van Gieson E , Verratti K , Wolcott M , Xie G , Sozhamannan S , Gibbons HS
Ref : PLoS ONE , 7 :e48228 , 2012
Abstract :
PubMedSearch : Ahmed_2012_PLoS.One_7_e48228
PubMedID: 23133618
Gene_locus related to this paper: ecoli-MCMK , ecoli-ycfp , ecoli-yqia , ecoli-YfhR

Title : Complete genome sequence of Cellulophaga lytica type strain (LIM-21) - Pati_2011_Stand.Genomic.Sci_4_221
Author(s) : Pati A , Abt B , Teshima H , Nolan M , Lapidus A , Lucas S , Hammon N , Deshpande S , Cheng JF , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Pagani I , Mavromatis K , Ovchinikova G , Chen A , Palaniappan K , Land M , Hauser L , Jeffries CD , Detter JC , Brambilla EM , Kannan KP , Rohde M , Spring S , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP , Ivanova N
Ref : Stand Genomic Sci , 4 :221 , 2011
Abstract :
PubMedSearch : Pati_2011_Stand.Genomic.Sci_4_221
PubMedID: 21677859
Gene_locus related to this paper: cellc-f0re62 , cellc-f0rek7 , cellc-f0rf75 , cellc-f0rgt2

Title : Complete genome sequence of Weeksella virosa type strain (9751) - Lang_2011_Stand.Genomic.Sci_4_81
Author(s) : Lang E , Teshima H , Lucas S , Lapidus A , Hammon N , Deshpande S , Nolan M , Cheng JF , Pitluck S , Liolios K , Pagani I , Mikhailova N , Ivanova N , Mavromatis K , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Brambilla EM , Kopitz M , Rohde M , Goker M , Tindall BJ , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC
Ref : Stand Genomic Sci , 4 :81 , 2011
Abstract :
PubMedSearch : Lang_2011_Stand.Genomic.Sci_4_81
PubMedID: 21475590
Gene_locus related to this paper: weevc-f0nz59 , weevc-f0p0t6 , weevc-f0p2m6 , weevc-f0p272 , weevc-f0nzv7 , weevc-f0p2m3

Title : Complete genome sequence of Leadbetterella byssophila type strain (4M15) - Abt_2011_Stand.Genomic.Sci_4_2
Author(s) : Abt B , Teshima H , Lucas S , Lapidus A , Del Rio TG , Nolan M , Tice H , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Mavromatis K , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Goker M , Tindall BJ , Detter JC , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC
Ref : Stand Genomic Sci , 4 :2 , 2011
Abstract :
PubMedSearch : Abt_2011_Stand.Genomic.Sci_4_2
PubMedID: 21475582
Gene_locus related to this paper: leab4-e4rqy5 , leab4-e4ru27 , leab4-e4ruf5 , leab4-e4rul3 , leab4-e4rut6 , leab4-e4rwa2 , leab4-e4rwt5 , leab4-e4rwv8 , leab4-e4ry52 , leab4-e4rzw2

Title : Genome sequence of the mercury-methylating and pleomorphic Desulfovibrio africanus Strain Walvis Bay - Brown_2011_J.Bacteriol_193_4037
Author(s) : Brown SD , Wall JD , Kucken AM , Gilmour CC , Podar M , Brandt CC , Teshima H , Detter JC , Han CS , Land ML , Lucas S , Han J , Pennacchio L , Nolan M , Pitluck S , Woyke T , Goodwin L , Palumbo AV , Elias DA
Ref : Journal of Bacteriology , 193 :4037 , 2011
Abstract :
PubMedSearch : Brown_2011_J.Bacteriol_193_4037
PubMedID: 21642452
Gene_locus related to this paper: desaf-f3ywu6

Title : Exploring the symbiotic pangenome of the nitrogen-fixing bacterium Sinorhizobium meliloti - Galardini_2011_BMC.Genomics_12_235
Author(s) : Galardini M , Mengoni A , Brilli M , Pini F , Fioravanti A , Lucas S , Lapidus A , Cheng JF , Goodwin L , Pitluck S , Land M , Hauser L , Woyke T , Mikhailova N , Ivanova N , Daligault H , Bruce D , Detter C , Tapia R , Han C , Teshima H , Mocali S , Bazzicalupo M , Biondi EG
Ref : BMC Genomics , 12 :235 , 2011
Abstract :
PubMedSearch : Galardini_2011_BMC.Genomics_12_235
PubMedID: 21569405
Gene_locus related to this paper: rhime-PCAD , rhime-RB1395 , sinmb-a0a0e0ub90

Title : Complete genome sequence of Mahella australiensis type strain (50-1 BON) - Sikorski_2011_Stand.Genomic.Sci_4_331
Author(s) : Sikorski J , Teshima H , Nolan M , Lucas S , Hammon N , Deshpande S , Cheng JF , Pitluck S , Liolios K , Pagani I , Ivanova N , Huntemann M , Mavromatis K , Ovchinikova G , Pati A , Tapia R , Han C , Goodwin L , Chen A , Palaniappan K , Land M , Hauser L , Ngatchou-Djao OD , Rohde M , Pukall R , Spring S , Abt B , Goker M , Detter JC , Woyke T , Bristow J , Markowitz V , Hugenholtz P , Eisen JA , Kyrpides NC , Klenk HP , Lapidus A
Ref : Stand Genomic Sci , 4 :331 , 2011
Abstract :
PubMedSearch : Sikorski_2011_Stand.Genomic.Sci_4_331
PubMedID: 21886860
Gene_locus related to this paper: maha5-f3zvv5

Title : Complete genome sequence of the cellulose-degrading bacterium Cellulosilyticum lentocellum - Miller_2011_J.Bacteriol_193_2357
Author(s) : Miller DA , Suen G , Bruce D , Copeland A , Cheng JF , Detter C , Goodwin LA , Han CS , Hauser LJ , Land ML , Lapidus A , Lucas S , Meincke L , Pitluck S , Tapia R , Teshima H , Woyke T , Fox BG , Angert ER , Currie CR
Ref : Journal of Bacteriology , 193 :2357 , 2011
Abstract :
PubMedSearch : Miller_2011_J.Bacteriol_193_2357
PubMedID: 21398547
Gene_locus related to this paper: celld-f2js06

Title : Complete genome sequence of Arcanobacterium haemolyticum type strain (11018) - Yasawong_2010_Stand.Genomic.Sci_3_126
Author(s) : Yasawong M , Teshima H , Lapidus A , Nolan M , Lucas S , Glavina Del Rio T , Tice H , Cheng JF , Bruce D , Detter C , Tapia R , Han C , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mavromatis K , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Sikorski J , Pukall R , Goker M , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Kyrpides NC , Klenk HP
Ref : Stand Genomic Sci , 3 :126 , 2010
Abstract :
PubMedSearch : Yasawong_2010_Stand.Genomic.Sci_3_126
PubMedID: 21304742
Gene_locus related to this paper: archd-d7bl98 , archd-d7bm52 , archd-d7bne1 , archd-d7bkh7

Title : Complete genome sequence of Vulcanisaeta distributa type strain (IC-017) - Mavromatis_2010_Stand.Genomic.Sci_3_117
Author(s) : Mavromatis K , Sikorski J , Pabst E , Teshima H , Lapidus A , Lucas S , Nolan M , Glavina Del Rio T , Cheng JF , Bruce D , Goodwin L , Pitluck S , Liolios K , Ivanova N , Mikhailova N , Pati A , Chen A , Palaniappan K , Land M , Hauser L , Chang YJ , Jeffries CD , Rohde M , Spring S , Goker M , Wirth R , Woyke T , Bristow J , Eisen JA , Markowitz V , Hugenholtz P , Klenk HP , Kyrpides NC
Ref : Stand Genomic Sci , 3 :117 , 2010
Abstract :
PubMedSearch : Mavromatis_2010_Stand.Genomic.Sci_3_117
PubMedID: 21304741
Gene_locus related to this paper: vuldi-e1qt20 , vuldi-e1qqi6