Koga Y

References (15)

Title : Structural Basis for the Serratia marcescens Lipase Secretion System: Crystal Structures of the Membrane Fusion Protein and Nucleotide-Binding Domain - Murata_2017_Biochemistry_56_6281
Author(s) : Murata D , Okano H , Angkawidjaja C , Akutsu M , Tanaka SI , Kitahara K , Yoshizawa T , Matsumura H , Kado Y , Mizohata E , Inoue T , Sano S , Koga Y , Kanaya S , Takano K
Ref : Biochemistry , 56 :6281 , 2017
Abstract :
PubMedSearch : Murata_2017_Biochemistry_56_6281
PubMedID: 29094929

Title : Calcium-independent opening of lid1 of a family I.3 lipase by a single Asp to Arg mutation at the calcium-binding site - Cheng_2014_Protein.Eng.Des.Sel_27_169
Author(s) : Cheng M , Angkawidjaja C , Koga Y , Kanaya S
Ref : Protein Engineering Des Sel , 27 :169 , 2014
Abstract :
PubMedSearch : Cheng_2014_Protein.Eng.Des.Sel_27_169
PubMedID: 24737906

Title : Crystal Structure and Thermodynamic and Kinetic Stability of Metagenome-Derived LC-Cutinase - Sulaiman_2014_Biochemistry_53_1858
Author(s) : Sulaiman S , You DJ , Kanaya E , Koga Y , Kanaya S
Ref : Biochemistry , 53 :1858 , 2014
Abstract :
PubMedSearch : Sulaiman_2014_Biochemistry_53_1858
PubMedID: 24593046
Gene_locus related to this paper: 9bact-g9by57

Title : Structure and stability of a thermostable carboxylesterase from the thermoacidophilic archaeon Sulfolobus tokodaii. - Angkawidjaja_2012_Febs.J_279_3071
Author(s) : Angkawidjaja C , Koga Y , Takano K , Kanaya S
Ref : Febs J , 279 :3071 , 2012
Abstract :
PubMedSearch : Angkawidjaja_2012_Febs.J_279_3071
PubMedID: 22748144
Gene_locus related to this paper: sulto-ST0071

Title : Isolation of a novel cutinase homolog with polyethylene terephthalate-degrading activity from leaf-branch compost by using a metagenomic approach - Sulaiman_2012_Appl.Environ.Microbiol_78_1556
Author(s) : Sulaiman S , Yamato S , Kanaya E , Kim JJ , Koga Y , Takano K , Kanaya S
Ref : Applied Environmental Microbiology , 78 :1556 , 2012
Abstract :
PubMedSearch : Sulaiman_2012_Appl.Environ.Microbiol_78_1556
PubMedID: 22194294
Gene_locus related to this paper: 9bact-g9by57

Title : Requirement of lid2 for interfacial activation of a family I.3 lipase with unique two lid structures - Cheng_2012_FEBS.J_279_3727
Author(s) : Cheng M , Angkawidjaja C , Koga Y , Kanaya S
Ref : Febs J , 279 :3727 , 2012
Abstract :
PubMedSearch : Cheng_2012_FEBS.J_279_3727
PubMedID: 22863357
Gene_locus related to this paper: psesp-Q9RBY1

Title : Importance of an extreme C-terminal motif of a family I.3 lipase for stability - Kuwahara_2011_Protein.Eng.Des.Sel_24_411
Author(s) : Kuwahara K , Angkawidjaja C , Koga Y , Takano K , Kanaya S
Ref : Protein Engineering Des Sel , 24 :411 , 2011
Abstract :
PubMedSearch : Kuwahara_2011_Protein.Eng.Des.Sel_24_411
PubMedID: 21216728

Title : X-ray crystallographic and MD simulation studies on the mechanism of interfacial activation of a family I.3 lipase with two lids - Angkawidjaja_2010_J.Mol.Biol_400_82
Author(s) : Angkawidjaja C , Matsumura H , Koga Y , Takano K , Kanaya S
Ref : Journal of Molecular Biology , 400 :82 , 2010
Abstract :
PubMedSearch : Angkawidjaja_2010_J.Mol.Biol_400_82
PubMedID: 20438738
Gene_locus related to this paper: psesp-Q9RBY1

Title : Importance of the Ca2+-binding sites in the N-catalytic domain of a family I.3 lipase for activity and stability - Kuwahara_2008_Protein.Eng.Des.Sel_21_737
Author(s) : Kuwahara K , Angkawidjaja C , Matsumura H , Koga Y , Takano K , Kanaya S
Ref : Protein Engineering Des Sel , 21 :737 , 2008
Abstract :
PubMedSearch : Kuwahara_2008_Protein.Eng.Des.Sel_21_737
PubMedID: 18987131
Gene_locus related to this paper: psesp-Q9RBY1

Title : Creation of novel enantioselective lipases by SIMPLEX - Koga_2007_Methods.Mol.Biol_375_165
Author(s) : Koga Y , Yamane T , Nakano H
Ref : Methods Mol Biol , 375 :165 , 2007
Abstract :
PubMedSearch : Koga_2007_Methods.Mol.Biol_375_165
PubMedID: 17634602
Gene_locus related to this paper: burce-lipaa

Title : Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation - Angkawidjaja_2007_FEBS.Lett_581_5060
Author(s) : Angkawidjaja C , You DJ , Matsumura H , Kuwahara K , Koga Y , Takano K , Kanaya S
Ref : FEBS Letters , 581 :5060 , 2007
Abstract :
PubMedSearch : Angkawidjaja_2007_FEBS.Lett_581_5060
PubMedID: 17923123
Gene_locus related to this paper: psesp-Q9RBY1

Title : Extracellular overproduction and preliminary crystallographic analysis of a family I.3 lipase - Angkawidjaja_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_187
Author(s) : Angkawidjaja C , You DJ , Matsumura H , Koga Y , Takano K , Kanaya S
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 63 :187 , 2007
Abstract :
PubMedSearch : Angkawidjaja_2007_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_63_187
PubMedID: 17329810
Gene_locus related to this paper: psesp-Q9RBY1

Title : Importance of a repetitive nine-residue sequence motif for intracellular stability and functional structure of a family I.3 lipase - Angkawidjaja_2005_FEBS.Lett_579_4707
Author(s) : Angkawidjaja C , Paul A , Koga Y , Takano K , Kanaya S
Ref : FEBS Letters , 579 :4707 , 2005
Abstract :
PubMedSearch : Angkawidjaja_2005_FEBS.Lett_579_4707
PubMedID: 16098975

Title : Modifying the chain-length selectivity of the lipase from Burkholderia cepacia KWI-56 through in vitro combinatorial mutagenesis in the substrate-binding site - Yang_2002_Protein.Eng_15_147
Author(s) : Yang J , Koga Y , Nakano H , Yamane T
Ref : Protein Engineering , 15 :147 , 2002
Abstract :
PubMedSearch : Yang_2002_Protein.Eng_15_147
PubMedID: 11917151

Title : In vitro construction and screening of a Burkholderia cepacia lipase library using single-molecule PCR and cell-free protein synthesis - Koga_2002_J.Biosci.Bioeng_94_84
Author(s) : Koga Y , Kobayashi K , Yang J , Nakano H , Yamane T
Ref : J Biosci Bioeng , 94 :84 , 2002
Abstract :
PubMedSearch : Koga_2002_J.Biosci.Bioeng_94_84
PubMedID: 16233275