Duf_3141
Relationship
Comment
Family close to Pha_depolymerase. This family of proteins with unknown function appears to be restricted to Proteobacteria. The only plant sequence could be a contaminant. The only characterized protein is rhime-yack which belongs to an operon inducible by phosphate stress
Database
Interpro : IPR024501 Protein of unknown function DUF3141
PIRSF : No PIRSF
Pdoc : No Pdoc
Pfam : PF11339 DUF3141
Prints : No Print
EC Number : No EC Number
Sequences
| Peptide in | Fasta |
| Nucleotide in | Fasta |
| Alignment with Multalin | Text only |
| Seed alignment with MAFFT | No colour / coloured with Mview |
| Alignment with MAFFT | No colour / coloured with Mview |
| Dendrogram | The dnd file |
| Gene_locus | Name | Species |
|---|---|---|
| 9burk-b1g6q9 | Burkholderia graminis C4D1M Putative uncharacterized protein | Burkholderia graminis C4D1M |
| 9burk-b5wax2 | Burkholderia sp. H160 Putative uncharacterized protein | Burkholderia sp. H160 |
| 9burk-b5wqb7 | Burkholderia sp. H160 Putative uncharacterized protein | Burkholderia sp. H160 |
| 9gamm-c6n5e9 | Legionella drancourtii LLAP12 Putative uncharacterized protein | Legionella drancourtii LLAP12 |
| 9rhob-a0p290 | Labrenzia aggregata IAM 12614 Hypothetical conserved protein | Labrenzia aggregata IAM 12614 |
| 9rhob-a6e5f6 | Roseovarius sp. Putative uncharacterized protein | Roseovarius sp. |
| 9rhob-a9hui2 | Roseobacter litoralis Och 149 Putative uncharacterized protein | Roseobacter litoralis Och 149 |
| 9rhob-b6yy40 | Pseudovibrio sp. JE062 Hydrolase, alpha\/beta fold family protein | Pseudovibrio sp. JE062 |
| 9rhob-b9r693 | Labrenzia alexandrii DFL-11 Putative uncharacterized protein | Labrenzia alexandrii DFL-11 |
| acicj-a5ft95 | Acidiphilium cryptum (strain JF-5) Putative uncharacterized protein | Acidiphilium cryptum |
| acide-c5t1r9 | Acidovorax delafieldii 2AN Putative uncharacterized protein | Acidovorax delafieldii 2AN |
| aciet-b9mbf1 | Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)) Putative uncharacterized protein | Acidovorax ebreus |
| acisj-a1w9c9 | Acidovorax sp. (strain JS42) Putative uncharacterized protein | Acidovorax sp. |
| acisj-a1w603 | Acidovorax sp. (strain JS42) Putative uncharacterized protein | Acidovorax sp. |
| aroae-q5p962 | Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)) Putative poly(3-hydroxyalkanoate) synthetase | Aromatoleum aromaticum |
| azoc5-a8ih86 | Azorhizobium caulinodans (strain ATCC 43989 \/ DSM 5975 \/ ORS 571) Putative uncharacterized protein | Azorhizobium caulinodans |
| azos1-d3p281 | Azospirillum sp. (strain B510) Putative uncharacterized protein | Azospirillum sp. |
| azosb-a1k5s0 | Azoarcus sp. (strain BH72) Conserved hypothetical | Azoarcus sp. |
| azosb-a1k696 | Azoarcus sp. (strain BH72) Putative uncharacterized protein | Azoarcus sp. |
| azovd-c1dgm6 | Azotobacter vinelandii (strain DJ \/ ATCC BAA-1303) Poly(3-hydroxybutyrate) depolymerase | Azotobacter vinelandii |
| azovd-c1dif2 | Azotobacter vinelandii (strain DJ \/ ATCC BAA-1303) Esterase, poly(3-hydroxybutyrate) depolymerase | Azotobacter vinelandii |
| azovd-c1djw3 | Azotobacter vinelandii (strain DJ \/ ATCC BAA-1303 AvOP) PHB de-polymerase | Azotobacter vinelandii |
| beii9-b2icg9 | Beijerinckia indica subsp. indica (strain ATCC 9039 \/ DSM 1715 \/ NCI 8712) Putative uncharacterized protein | Beijerinckia indica subsp. indica |
| beii9-b2igq5 | Beijerinckia indica subsp. indica (strain ATCC 9039 \/ DSM 1715 \/ NCI 8712) PHB de-polymerase domain protein | Beijerinckia indica subsp. indica |
| beii9-b2iia7 | Beijerinckia indica subsp. indica (strain ATCC 9039 \/ DSM 1715 \/ NCI 8712) Putative uncharacterized protein | Beijerinckia indica subsp. indica |
| borpd-a9hzm8 | Bordetella petrii (strain ATCC BAA-461 \/ DSM 12804 \/ CCUG 43448) Putative uncharacterized protein | Bordetella petrii |
| borpe-q7vzb4 | Bordetella pertussis Putative Bordetella bronchiseptica (Alcaligenes bronchisepticus) Bordetella parapertussis uncharacterized protein | Bordetella pertussis |
| braja-BLL4548 | Bradyrhizobium japonicum bll4548 protein | Bradyrhizobium japonicum |
| braja-BLR3456 | Bradyrhizobium japonicum blr3456 protein | Bradyrhizobium japonicum |
| brasb-a5ef53 | Bradyrhizobium sp. (strain BTAi1 \/ ATCC BAA-1182) Putative uncharacterized protein | Bradyrhizobium sp. |
| brasb-a5eg29 | Bradyrhizobium sp. (strain BTAi1 \/ ATCC BAA-1182) Putative uncharacterized protein | Bradyrhizobium sp. |
| brasb-a5eul1 | Bradyrhizobium sp. (strain BTAi1 \/ ATCC BAA-1182) Putative uncharacterized protein | Bradyrhizobium sp. |
| braso-a4z1h1 | Bradyrhizobium sp. (strain ORS278) Putative uncharacterized protein | Bradyrhizobium sp. |
| burcc-b1k8j3 | Burkholderia cenocepacia (strains MC0-3\; AU 1054\; HI2424\; PC184) phb de-polymerase-like , C-terminal precursor | Burkholderia cenocepacia |
| burp8-b2jmm5 | Burkholderia phymatum (strain DSM 17167 \/ STM815) Putative uncharacterized protein | Burkholderia phymatum |
| burs3-q391x0 | Burkholderia lata Putative uncharacterized protein | Burkholderia sp. |
| burvg-a4js32 | Burkholderia vietnamiensis (strain G4 \/ LMG 22486) (Burkholderia cepacia (strain R1808)) Burkholderia multivorans (strain ATCC 17616 \/ 249) Putative uncharacterized protein | Burkholderia vietnamiensis |
| burvg-a4jv42 | Burkholderia vietnamiensis (strain G4 \/ LMG 22486) (Burkholderia cepacia (strain R1808)) Putative uncharacterized protein | Burkholderia vietnamiensis |
| burvg-a4jv47 | Burkholderia vietnamiensis (strain G4 \/ LMG 22486) (Burkholderia cepacia (strain R1808)) PHB de-polymerase domain protein | Burkholderia vietnamiensis |
| burvi-q4bi33 | Burkholderia vietnamiensis G4 precursor | Burkholderia vietnamiensis G4 |
| chrsd-q1qx98 | Chromohalobacter salexigens (strain DSM 3043 \/ ATCC BAA-138 \/ NCIM 13768) Putative poly(3-hydroxyalkanoate) synthetase | Chromohalobacter salexigens |
| chrvo-q7nwh6 | Chromobacterium violaceum Putative uncharacterized protein | Chromobacterium violaceum |
| chrvo-q7p1c7 | Chromobacterium violaceum Putative uncharacterized protein | Chromobacterium violaceum |
| comt2-d0j233 | Comamonas testosteroni, Putative uncharacterized protein | Comamonas testosteroni |
| comte-b7wqc8 | Comamonas testosteroni KF-1 Putative uncharacterized protein | Comamonas testosteroni KF-1 |
| comte-b7x1q8 | Comamonas testosteroni KF-1 Putative uncharacterized protein | Comamonas testosteroni KF-1 |
| cupnh-q0k0q7 | Cupriavidus necator (strain ATCC 17699 \/ H16 \/ DSM 428 \/ Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_B1632 | Cupriavidus necator |
| cupnh-q0kdv2 | Cupriavidus necator (strain ATCC 17699 \/ H16 \/ DSM 428 \/ Stanier 337) (Ralstonia eutropha) Putative uncharacterized protein h16_A0671 | Cupriavidus necator |
| cuppj-q472w1 | Cupriavidus pinatubonensis (strain JMP134 \/ LMG 1197) (Alcaligenes eutrophus) (Ralstonia eutropha) Putative uncharacterized protein | Cupriavidus pinatubonensis |
| cuppj-q475c4 | Cupriavidus pinatubonensis (strain JMP134 \/ LMG 1197) (Alcaligenes eutrophus) (Ralstonia eutropha) Putative uncharacterized protein | Cupriavidus pinatubonensis |
| cuptr-b3r4w6 | Cupriavidus taiwanensis (strain R1 \/ LMG 19424) (Ralstonia taiwanensi (strain LMG 19424)) Putative uncharacterized protein | Cupriavidus taiwanensis |
| delas-a9brz2 | Delftia acidovorans (strain DSM 14801 \/ SPH-1) Putative uncharacterized protein | Delftia acidovorans |
| desah-c0qhm8 | Desulfobacterium autotrophicum (strain ATCC 43914 \/ DSM 3382 \/ HRM2) Poly(3-hydroxyalkanoate) synthetase | Desulfobacterium autotrophicum |
| legpa-q5x3d6 | Legionella pneumophila (strain Paris) (strain Corby) (strain Lens) (strain Philadelphia 1 ATCC 33152 \/ DSM 7513) Putative uncharacterized protein | Legionella pneumophila |
| legpn-Q8RNQ1 | Legionella pneumophila (and subsp. pneumophila (strain Philadelphia 1 ATCC 33152 \/ DSM 7513) (strain Paris) (strain Corby) hypothetical protein | Legionella pneumophila |
| lepcp-b1xwq8 | Leptothrix cholodnii (strain ATCC 51168 \/ LMG 8142 \/ SP-6) (Leptothrix discophora (strain SP-6)) Putative uncharacterized protein | Leptothrix cholodnii |
| metea-c5b1t3 | Methylobacterium extorquens (strain ATCC 14718 \/ DSM 1338 \/ AM1) Putative uncharacterized protein | Methylobacterium extorquens |
| meted-c7cfx5 | Methylobacterium extorquens (strain DSM 5838 \/ DM4) (Methylobacterium dichloromethanicum (strain DM4)) Putative uncharacterized protein | Methylobacterium extorquens |
| meted-c7cnd9 | Methylobacterium extorquens (strain DSM 5838 \/ DM4) (Methylobacterium dichloromethanicum (strain DM4)) Putative uncharacterized protein | Methylobacterium extorquens |
| metno-b8ihj3 | Methylobacterium nodulans (strain ORS2060 \/ LMG 21967) Putative uncharacterized protein | Methylobacterium nodulans |
| mets4-b0umc8 | Methylobacterium sp. (strain 4-46) Putative uncharacterized protein | Methylobacterium sp. |
| metsb-b8eis0 | Methylocella silvestris (strain BL2 \/ DSM 15510 \/ NCIMB 13906) Putative uncharacterized protein | Methylocella silvestris |
| metsb-b8eqs6 | Methylocella silvestris (strain BL2 \/ DSM 15510 \/ NCIMB 13906) Putative uncharacterized protein | Methylocella silvestris |
| metsb-b8ern6 | Methylocella silvestris (strain BL2 \/ DSM 15510 \/ NCIMB 13906) PHB de-polymerase domain protein | Methylocella silvestris |
| metsb-b8ert2 | Methylocella silvestris (strain BL2 \/ DSM 15510 \/ NCIMB 13906) Putative uncharacterized protein | Methylocella silvestris |
| nitec-q0ajy0 | Nitrosomonas eutropha (strain C91) Putative uncharacterized protein | Nitrosomonas eutropha |
| nithx-q1qpw8 | Nitrobacter hamburgensis (strain X14 \/ DSM 10229) Putative uncharacterized protein | Nitrobacter hamburgensis |
| parl1-a7hyr7 | Parvibaculum lavamentivorans\; Tolumonas auensis. Putative uncharacterized protein | Parvibaculum lavamentivorans |
| polna-a1vvx2 | Polaromonas naphthalenivorans (strain CJ2) Putative uncharacterized protein | Polaromonas naphthalenivorans |
| pseu5-a4vhe6 | Pseudomonas stutzeri (strain A1501) Poly(3-hydroxyalkanoate) synthetase | Pseudomonas stutzeri |
| ralme-q1lqx6 | Ralstonia metallidurans (strain CH34 \/ ATCC 43123 \/ DSM 2839) Putative uncharacterized protein | Ralstonia metallidurans |
| ralp1-c6br16 | Ralstonia pickettii (strain 12D) (strain 12J) Putative uncharacterized protein | Ralstonia pickettii |
| ralso-b5s536 | Ralstonia solanacearum (Pseudomonas solanacearum) Putative uncharacterized protein | Ralstonia solanacearum |
| rhiet-YP061 | Rhizobium etli (and strain CFN 42 \/ ATCC 51251) hypothetical protein | Rhizobium etli |
| rhime-yack | Rhizobium meliloti (Ensifer meliloti) (Sinorhizobium meliloti) ORFA | Sinorhizobium meliloti |
| rhisn-c3krv5 | Rhizobium sp. (strain NGR234) Putative 3-hydroxyalkanoate synthetase | Rhizobium sp. |
| rhop5-q07lt7 | Rhodopseudomonas palustris (strain BisA53) Putative uncharacterized protein | Rhodopseudomonas palustris |
| rhopt-b3qg39 | Rhodopseudomonas palustris (strain TIE-1) Putative uncharacterized protein | Rhodopseudomonas palustris |
| synww-q0axu9 | Syntrophomonas wolfei subsp. wolfei (strain Goettingen) putative uncharacterized protein | Syntrophomonas wolfei subsp. wolfei |
| xanp2-a7ikd9 | Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) Putative uncharacterized protein | Xanthobacter autotrophicus |
| xanp2-a7ip61 | Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) Putative uncharacterized protein | Xanthobacter autotrophicus |
| xanp2-a7ipv4 | Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) Putative uncharacterized protein | Xanthobacter autotrophicus |
| xanp2-a7iq18 | Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) Putative uncharacterized protein | Xanthobacter autotrophicus |
| Gene_locus_frgt | Name | Species |
|---|---|---|
| acicj-a5ft87 | Acidiphilium cryptum (strain JF-5) Response regulator receiver protein | Acidiphilium cryptum |
| ricco-b9taj9 | Ricinus communis (Castor bean) Putative uncharacterized protein | Ricinus communis |
| xanp2-a7ike1 | Xanthobacter autotrophicus (strain ATCC BAA-1158 \/ Py2) Putative uncharacterized protein | Xanthobacter autotrophicus |
References (1)
| Title : Genes coding for phosphotransacetylase and acetate kinase in Sinorhizobium meliloti are in an operon that is inducible by phosphate stress and controlled by phoB - Summers_1999_J.Bacteriol_181_2217 |
| Author(s) : Summers ML , Denton MC , McDermott TR |
| Ref : Journal of Bacteriology , 181 :2217 , 1999 |
| Abstract : |
| PubMedSearch : Summers_1999_J.Bacteriol_181_2217 |
| PubMedID: 10094701 |
| Gene_locus related to this paper: rhime-yack |