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Gene_locus Report for: anapl-r0m5n4

Anas platyrhynchos (Domestic duck) (Anas boschas) Thyroglobulin

Relationship
Family|Thyroglobulin
Block| C
Position in NCBI Life Tree|Anas platyrhynchos
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Archelosauria: N E > Archosauria: N E > Dinosauria: N E > Saurischia: N E > Theropoda: N E > Coelurosauria: N E > Aves: N E > Neognathae: N E > Galloanserae: N E > Anseriformes: N E > Anatidae: N E > Anas: N E > Anas platyrhynchos: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
Sequence
Graphical view for this peptide sequence: anapl-r0m5n4
Colored MSA for Thyroglobulin (raw)
HGDLIGKSQVVRIGSEWRNISQFLGIPYAAPPLAERRFNPPEPFAWVETW
NATVARSTCWQPGDGEAPSYFVSEDCLYLNVFVPVTTVKNMSVLLFFHNG
GSGNTEAGKTTIDGSYLAAISNTIVVTASYRVGVFGFLSTAGSSEASGNA
GLLDQLAALKWVQQNIASFGGDANSVSIGADRSGADVVSIHLLTDTADMD
LFRRALLMGGSAFSPSSIITKRRAQTQAAVLAEEVGCSSSTNGEIVACLR
QLPARVLNDAQTKLLAISGPFQYWGPVMDGVYLREPLAKALQRSQLRKVD
LLIGSAQQDGLISRAKAIKKFEESQGRANSKTAFYQALQNSLGGEDSNKF
IEDAATWYYSLEHSTDDYSSFSRALENATRDQFITCPIINMANHWAANSI
GNVFMYHVPESSAQSSSGLELLLDVQYAFGLPFYPKYEERFTLDEKRLSL
QIMQYISNFVNSGNPNYPHSFSRRMSGLMPLWPMFLPNDDGDNYKEFTAS
LPTLKGLKKEDCSFWSDYIRRLKES
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

HGDLIGKSQVVRIGSEWRNISQFLGIPYAAPPLAERRFNPPEPFAWVETW
NATVARSTCWQPGDGEAPSYFVSEDCLYLNVFVPVTTVKNMSVLLFFHNG
GSGNTEAGKTTIDGSYLAAISNTIVVTASYRVGVFGFLSTAGSSEASGNA
GLLDQLAALKWVQQNIASFGGDANSVSIGADRSGADVVSIHLLTDTADMD
LFRRALLMGGSAFSPSSIITKRRAQTQAAVLAEEVGCSSSTNGEIVACLR
QLPARVLNDAQTKLLAISGPFQYWGPVMDGVYLREPLAKALQRSQLRKVD
LLIGSAQQDGLISRAKAIKKFEESQGRANSKTAFYQALQNSLGGEDSNKF
IEDAATWYYSLEHSTDDYSSFSRALENATRDQFITCPIINMANHWAANSI
GNVFMYHVPESSAQSSSGLELLLDVQYAFGLPFYPKYEERFTLDEKRLSL
QIMQYISNFVNSGNPNYPHSFSRRMSGLMPLWPMFLPNDDGDNYKEFTAS
LPTLKGLKKEDCSFWSDYIRRLKES


Reference
    Title: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
    Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y and Li N <40 more author(s)>
    Ref: Nat Genet, 45:776, 2013 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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