Gene_Locus Report

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Gene_locus Report for: anapl-thioe

Anas platyrhynchos (Domestic duck) (Anas boschas) Fatty acyl-CoA hydrolase, medium chain thioesterase B

Relationship
Family|Carb_B_Chordata
Block| C
Position in NCBI Life Tree|Anas platyrhynchos
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Deuterostomia: N E > Chordata: N E > Craniata: N E > Vertebrata: N E > Gnathostomata: N E > Teleostomi: N E > Euteleostomi: N E > Sarcopterygii: N E > Dipnotetrapodomorpha: N E > Tetrapoda: N E > Amniota: N E > Sauropsida: N E > Sauria: N E > Archelosauria: N E > Archosauria: N E > Dinosauria: N E > Saurischia: N E > Theropoda: N E > Coelurosauria: N E > Aves: N E > Neognathae: N E > Galloanserae: N E > Anseriformes: N E > Anatidae: N E > Anas: N E > Anas platyrhynchos: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
3 Genbank : L05493, KB743139, ADON01076074
3 UniProt : Q04791, R0JU81, U3IWW1
1 Ncbi-nid : 213100
3 UniProt : Q04791, R0JU81, U3IWW1
3 Interpro : Q04791, R0JU81, U3IWW1
3 Pfam : Q04791, R0JU81, U3IWW1
3 PIRSF : Q04791, R0JU81, U3IWW1
3 SUPERFAM : Q04791, R0JU81, U3IWW1
Sequence
Graphical view for this peptide sequence: anapl-thioe
Colored MSA for Carb_B_Chordata (raw)
MATEKNTLLSLILTAGITALVATGQKAEQPEVVTNYGSVRGYQVKVNAAE
RSVNVFLGLPFAKPPVGPLRFSEPQPPEPWKGVRDAASYPPMCLQDKVLG
QYFSDAITNRKEKVRLQISEDCLYLNVYTPVSTEEQEKLPVFVWIHGGGL
VFGAASSYDGSALAAFDNVVVVTIQYRLGIAGYFSTGDKHARGNWGYLDQ
VAALQWIQENIIHFRGDPGSVTIFGESAGGVSVSALVLSPLAKGLFHKAI
SESGTAVRILFTDEPEEQAQRIAAAAGCEKSSSAALVECLREKTEAEMEQ
ITLKMPPMFISASLDGVFFPKSPRQLLSEKVINAVPYIIGVNNCEFGWIL
PRMMKFPEFTEGLEKDVARQVLQSTLALSFKGAPSDIVDLVYNEYIGVAE
NRAQVRDGLLDSIADPLFVFSAVEVARHHRDAGNPVYFYEFQHRPSSAAG
VVPEFVKADHADEIAFVFGKPFLAGNATEEEAKLSRTVMKYWTNFARNGN
PNGEGLVHWPQYDMDERYLEIDLTQKAAKKLKERKMEFWMQLTEQIMSDR
RRKHTDL
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MATEKNTLLSLILTAGITALVATGQKAEQPEVVTNYGSVRGYQVKVNAAE
RSVNVFLGLPFAKPPVGPLRFSEPQPPEPWKGVRDAASYPPMCLQDKVLG
QYFSDAITNRKEKVRLQISEDCLYLNVYTPVSTEEQEKLPVFVWIHGGGL
VFGAASSYDGSALAAFDNVVVVTIQYRLGIAGYFSTGDKHARGNWGYLDQ
VAALQWIQENIIHFRGDPGSVTIFGESAGGVSVSALVLSPLAKGLFHKAI
SESGTAVRILFTDEPEEQAQRIAAAAGCEKSSSAALVECLREKTEAEMEQ
ITLKMPPMFISASLDGVFFPKSPRQLLSEKVINAVPYIIGVNNCEFGWIL
PRMMKFPEFTEGLEKDVARQVLQSTLALSFKGAPSDIVDLVYNEYIGVAE
NRAQVRDGLLDSIADPLFVFSAVEVARHHRDAGNPVYFYEFQHRPSSAAG
VVPEFVKADHADEIAFVFGKPFLAGNATEEEAKLSRTVMKYWTNFARNGN
PNGEGLVHWPQYDMDERYLEIDLTQKAAKKLKERKMEFWMQLTEQIMSDR
RRKHTDL


References
    Title: The duck genome and transcriptome provide insight into an avian influenza virus reservoir species
    Huang Y, Li Y, Burt DW, Chen H, Zhang Y, Qian W, Kim H, Gan S, Zhao Y and Li N <40 more author(s)>
    Ref: Nat Genet, 45:776, 2013 : PubMed

            

    Title: Molecular cloning and sequencing of thioesterase B cDNA and stimulation of expression of the thioesterase B gene associated with hormonal induction of peroxisome proliferation
    Hwang CS, Kolattukudy PE
    Ref: Journal of Biological Chemistry, 268:14278, 1993 : PubMed

            


Other Papers


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Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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