Gene_Locus Report

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Gene_locus Report for: lisw6-a0am12

Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 SLCC5334) Complete genome

Relationship
Family|6_AlphaBeta_hydrolase
Block| X
Position in NCBI Life Tree|Listeria welshimeri
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Bacteria: N E > Terrabacteria group: N E > Firmicutes: N E > Bacilli: N E > Bacillales: N E > Listeriaceae: N E > Listeria: N E > Listeria welshimeri: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
1 Genbank : AM263198
1 UniProt : A0AM12
1 UniProt : A0AM12
1 Interpro : A0AM12
1 Pfam : A0AM12
1 PIRSF : A0AM12
1 SUPERFAM : A0AM12
Sequence
Graphical view for this peptide sequence: lisw6-a0am12
Colored MSA for 6_AlphaBeta_hydrolase (raw)
MHKTIRNVDVYYEKYGEGIPIIMIHGFAPDSQLMIGCMEPVFDKESRFSR
IYLDLPGMGKTENYDSIQNADHVLSLLLEFIEAVIPFEQFVLAGESYGGY
LARGIAAKIPDRVLGVLLICPVIYPEKEKRTLPEQKVMYQDEAFVQSLSK
EDQAYFSKSGVILTAKNWNRFLAEVMAGMINADGEFLDRLSANYALSFDP
DEKALFDVPALFFFGRQDDHVGYADGLTLLEKYPHASFAILDFAGHNLQI
EQSKIFATMVEDFLFRVKPE
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MHKTIRNVDVYYEKYGEGIPIIMIHGFAPDSQLMIGCMEPVFDKESRFSR
IYLDLPGMGKTENYDSIQNADHVLSLLLEFIEAVIPFEQFVLAGESYGGY
LARGIAAKIPDRVLGVLLICPVIYPEKEKRTLPEQKVMYQDEAFVQSLSK
EDQAYFSKSGVILTAKNWNRFLAEVMAGMINADGEFLDRLSANYALSFDP
DEKALFDVPALFFFGRQDDHVGYADGLTLLEKYPHASFAILDFAGHNLQI
EQSKIFATMVEDFLFRVKPE


Reference
    Title: Whole-genome sequence of Listeria welshimeri reveals common steps in genome reduction with Listeria innocua as compared to Listeria monocytogenes
    Hain T, Steinweg C, Kuenne CT, Billion A, Ghai R, Chatterjee SS, Domann E, Karst U, Goesmann A and Chakraborty T <12 more author(s)>
    Ref: Journal of Bacteriology, 188:7405, 2006 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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