Gene_locus Report for: mizye-a0a210pwl7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). S-formylglutathione hydrolase
Relationship
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.) cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Lophotrochozoa: N E > Mollusca: N E > Bivalvia: N E > Pteriomorphia: N E > Pectinoida: N E > Pectinoidea: N E > Pectinidae: N E > Mizuhopecten: N E > Mizuhopecten yessoensis: N E ABHD8 :
mizye-a0a210q332 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 8 .
ABHD12-PHARC :
mizye-a0a210qyk8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Oxidized phosphatidylserine lipase ABHD12 .
ABHD13-BEM46 :
mizye-a0a210pij5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Alpha/beta hydrolase domain-containing protein 13 .
abh_upf0017 :
mizye-a0a210pqn0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 ,
mizye-a0a210q7t5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Abhydrolase domain-containing protein 15 .
ACHE :
mizye-a0a210qls6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-5989.14.1 ,
mizye-a0a210qis3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7021.7 ,
mizye-a0a210qg00 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Acetylcholinesterase PYE-7653.1 .
Carb_B_Mollusca :
mizye-a0a210pu25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-10985.38 ,
mizye-a0a210pek1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pul3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pum3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptr6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.15 ,
mizye-a0a210ptq5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptc4.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptc4.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylesterase 1C(1) two genes concatened ,
mizye-a0a210ptv1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.9 ,
mizye-a0a210ptv7 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qgl6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg90 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptq0 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase PYE-110997.11 ,
mizye-a0a210qg72 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210ptb1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pjd3 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg92 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q8v2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210qg93 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q160.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210q160.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase (two genes concatened) ,
mizye-a0a210qes4 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210pk25 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q1b8 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-a0a210q110 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Liver carboxylesterase 2 ,
mizye-a0a210r503 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase ,
mizye-P021348901.1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 ,
mizye-P021348901.2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Carboxylic ester hydrolase LOC110447492 isoform X1 PYE-3431.12 .
Neuroligin :
mizye-a0a210r5n9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis).Neuroligin PYE-431.60 ,
mizye-a0a210qbv2 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Neuroligin PYE-8469.10 .
PAF-Acetylhydrolase :
mizye-a0a210q8u5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). 1-alkyl-2-acetylglycerophosphocholine esterase .
Pancreatic_lipase :
mizye-a0a210ped6 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic triacylglycerol lipase ,
mizye-a0a210q4h5 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4h9 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210q4j1 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Inactive pancreatic lipase-related protein 1 ,
mizye-a0a210qf86 Mizuhopecten yessoensis (Japanese scallop) (Patinopecten yessoensis). Pancreatic lipase-related protein 2 Molecular evidence
Database
No mutation No structure No kinetic No Substrate No inhibitor
Sequence
Graphical view for this peptide sequence: mizye-a0a210pwl7 Colored MSA for A85-EsteraseD-FGH (raw)
MLFGCRRVFIEVHKKITKFASFRGYDTTTVKMALTEVSSNKMFGGWQKVF
SHESAELKCTMKFGVFIPAKAESKKVPVVYWLSGLTCTEQNFLTKAGSQK
YAAEHGLMIVIPDTSPRGCNIEGEDDAYDFGSGAGFYVNATQDKWKTNYR
MYAYITEELPALINSNFAAIPEKMSIFGHSMGGHGALICALKNPGKYKAV
SAFAPICNPINCPWGQKAFSGYLGDNKEDWKEYDATELVKKYNGPPLEIH
IDQGKADNFLPAGQLLPDNFVAACAEAKMPVVLRMQEGYDHSYFFMATFM
EDHMKHHAKVLNQ
Legend
This sequence has been compared to family alignement (MSA) red => minority aminoacid blue => majority aminoacid color intensity => conservation rate title => sequence position(MSA position)aminoacid rate Catalytic site Catalytic site in the MSA
M L F G C R R V F I E V H K K I T K F A S F R G Y D T T T V K M A L T E V S S N K M F G G W Q K V F S H E S A E L K C T M K F G V F I P A K A E S K K V P V V Y W L S G L T C T E Q N F L T K A G S Q K Y A A E H G L M I V I P D T S P R G C N I E G E D D A Y D F G S G A G F Y V N A T Q D K W K T N Y R M Y A Y I T E E L P A L I N S N F A A I P E K M S I F G H S M G G H G A L I C A L K N P G K Y K A V S A F A P I C N P I N C P W G Q K A F S G Y L G D N K E D W K E Y D A T E L V K K Y N G P P L E I H I D Q G K A D N F L P A G Q L L P D N F V A A C A E A K M P V V L R M Q E G Y D H S Y F F M A T F M E D H M K H H A K V L N Q
Reference
Title: Scallop genome provides insights into evolution of bilaterian karyotype and developmentWang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B and Bao Z <42 more author(s)> Wang S , Zhang J , Jiao W , Li J , Xun X , Sun Y , Guo X , Huan P , Dong B , Zhang L , Hu X , Sun X , Wang J , Zhao C , Wang Y , Wang D , Huang X , Wang R , Lv J , Li Y , Zhang Z , Liu B , Lu W , Hui Y , Liang J , Zhou Z , Hou R , Li X , Liu Y , Li H , Ning X , Lin Y , Zhao L , Xing Q , Dou J , Mao J , Guo H , Dou H , Li T , Mu C , Jiang W , Fu Q , Fu X , Miao Y , Liu J , Yu Q , Li R , Liao H , Kong Y , Jiang Z , Chourrout D , Bao Z (- 42) Ref: Nat Ecol Evol, 1 :120, 2017 : PubMed Abstract ESTHER: Wang_2017_Nat.Ecol.Evol_1_120 PubMedSearch: Wang 2017 Nat.Ecol.Evol 1 120 PubMedID: 28812685 Gene_locus related to this paper: mizye-a0a210qls6 ,
mizye-a0a210qis3 ,
mizye-a0a210qg00 ,
mizye-a0a210ped6 ,
mizye-a0a210q4h5 ,
mizye-a0a210q4h9 ,
mizye-a0a210q4j1 ,
mizye-a0a210qf86 ,
mizye-a0a210q332 ,
mizye-a0a210pqn0 ,
mizye-a0a210q7t5 ,
mizye-a0a210pij5 ,
mizye-a0a210qyk8 ,
mizye-a0a210pwl7 ,
mizye-a0a210q8u5 ,
mizye-a0a210r5n9 ,
mizye-a0a210qbv2 ,
mizye-a0a210pu25 ,
mizye-a0a210pek1 ,
mizye-a0a210pul3 ,
mizye-a0a210pum3 ,
mizye-a0a210ptr6 ,
mizye-a0a210ptq5 ,
mizye-a0a210ptc4.1 ,
mizye-a0a210ptc4.2 ,
mizye-a0a210ptv1 ,
mizye-a0a210ptv7 ,
mizye-a0a210qgl6 ,
mizye-a0a210qg90 ,
mizye-a0a210ptq0 ,
mizye-a0a210qg72 ,
mizye-a0a210ptb1 ,
mizye-a0a210pjd3 ,
mizye-a0a210qg92 ,
mizye-a0a210q8v2 ,
mizye-a0a210qg93 ,
mizye-a0a210q160.1 ,
mizye-a0a210q160.2 ,
mizye-a0a210qes4 ,
mizye-a0a210pk25 ,
mizye-a0a210q1b8 ,
mizye-a0a210q110 ,
mizye-a0a210r503 ,
mizye-P021348901.1 ,
mizye-P021348901.2 Abstract
Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical. Here we report a high-quality, chromosome-anchored reference genome for the scallop Patinopecten yessoensis, a bivalve mollusc that has a slow-evolving genome with many ancestral features. Chromosome-based macrosynteny analysis reveals a striking correspondence between the 19 scallop chromosomes and the 17 presumed ancestral bilaterian linkage groups at a level of conservation previously unseen, suggesting that the scallop may have a karyotype close to that of the bilaterian ancestor. Scallop Hox gene expression follows a new mode of subcluster temporal co-linearity that is possibly ancestral and may provide great potential in supporting diverse bilaterian body plans. Transcriptome analysis of scallop mantle eyes finds unexpected diversity in phototransduction cascades and a potentially ancient Pax2/5/8-dependent pathway for noncephalic eyes. The outstanding preservation of ancestral karyotype and developmental control makes the scallop genome a valuable resource for understanding early bilaterian evolution and biology.
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