| Title : Description of Transport Tunnel in Haloalkane Dehalogenase Variant LinB D147C+L177C from Sphingobium japonicum - Iermak_2021_Catalysts_11_5 |
| Author(s) : Iermak I , Degtjarik O , Havlickova P , Kuty M , Chaloupkova R , Damborsky J , Prudnikova T , Smatanova IK |
| Ref : Catalysts , 11 :5 , 2021 |
| Abstract : |
| PubMedSearch : Iermak_2021_Catalysts_11_5 |
| PubMedID: |
| Gene_locus related to this paper: sphpi-linb |
| Title : The tetrameric structure of the novel haloalkane dehalogenase DpaA from Paraglaciecola agarilytica NO2 - Mazur_2021_Acta.Crystallogr.D.Struct.Biol_77_347 |
| Author(s) : Mazur A , Prudnikova T , Grinkevich P , Mesters JR , Mrazova D , Chaloupkova R , Damborsky J , Kuty M , Kolenko P , Kuta Smatanova I |
| Ref : Acta Crystallographica D Struct Biol , 77 :347 , 2021 |
| Abstract : |
| PubMedSearch : Mazur_2021_Acta.Crystallogr.D.Struct.Biol_77_347 |
| PubMedID: 33645538 |
| Gene_locus related to this paper: 9alte-k6xnl5 |
| Title : Structural Analysis of the Ancestral Haloalkane Dehalogenase AncLinB-DmbA - Mazur_2021_Int.J.Mol.Sci_22_11992 |
| Author(s) : Mazur A , Grinkevich P , Chaloupkova R , Havlickova P , Kascakova B , Kuty M , Damborsky J , Kuta Smatanova I , Prudnikova T |
| Ref : Int J Mol Sci , 22 : , 2021 |
| Abstract : |
| PubMedSearch : Mazur_2021_Int.J.Mol.Sci_22_11992 |
| PubMedID: 34769421 |
| Gene_locus related to this paper: 9zzzz-AncLinB |
| Title : Stabilization of Haloalkane Dehalogenase Structure by Interfacial Interaction with Ionic Liquids - Shaposhnikova_2021_Crystals_11_1052 |
| Author(s) : Shaposhnikova A , Kuty M , Chaloupkova R , Damborsky J , Smatanova IK , Minofar B , Prudnikova T |
| Ref : Crystals , 11 :1052 , 2021 |
| Abstract : |
| PubMedSearch : Shaposhnikova_2021_Crystals_11_1052 |
| PubMedID: |
| Gene_locus related to this paper: rhoso-halo1 |
| Title : Crystal structure of the cold-adapted haloalkane dehalogenase DpcA from Psychrobacter cryohalolentis K5 - Tratsiak_2019_Acta.Crystallogr.F.Struct.Biol.Commun_75_324 |
| Author(s) : Tratsiak K , Prudnikova T , Drienovska I , Damborsky J , Brynda J , Pachl P , Kuty M , Chaloupkova R , Rezacova P , Kuta Smatanova I |
| Ref : Acta Crystallographica F Struct Biol Commun , 75 :324 , 2019 |
| Abstract : |
| PubMedSearch : Tratsiak_2019_Acta.Crystallogr.F.Struct.Biol.Commun_75_324 |
| PubMedID: 31045561 |
| Gene_locus related to this paper: psyck-q1qbb9 |
| Title : Crystallization and Crystallographic Analysis of a Bradyrhizobium Elkanii USDA94 Haloalkane Dehalogenase Variant with an Eliminated Halide-Binding Site - Pudnikova_2019_Crystals_9_375 |
| Author(s) : Prudnikova T , Kascakova B , Mesters JR , Grinkevich P , Havlickova P , Mazur A , Shaposhnikova A , Chaloupkova R , Damborsky J , Kuty M , Smatanova IK |
| Ref : , 9 :375 , 2019 |
| Abstract : |
| PubMedSearch : Pudnikova_2019_Crystals_9_375 |
| PubMedID: |
| Gene_locus related to this paper: brael-e2rv62 |
| Title : Structural and functional analysis of a novel haloalkane dehalogenase with two halide-binding sites - Chaloupkova_2014_Acta.Crystallogr.D.Biol.Crystallogr_70_1884 |
| Author(s) : Chaloupkova R , Prudnikova T , Rezacova P , Prokop Z , Koudelakova T , Daniel L , Brezovsky J , Ikeda-Ohtsubo W4 , Sato Y , Kuty M , Nagata Y , Kuta Smatanova I , Damborsky J |
| Ref : Acta Crystallographica D Biol Crystallogr , 70 :1884 , 2014 |
| Abstract : |
| PubMedSearch : Chaloupkova_2014_Acta.Crystallogr.D.Biol.Crystallogr_70_1884 |
| PubMedID: 25004965 |
| Gene_locus related to this paper: brael-e2rv62 |
| Title : Crystallographic analysis of 1,2,3-trichloropropane biodegradation by the haloalkane dehalogenase DhaA31 - Lahoda_2014_Acta.Crystallogr.D.Biol.Crystallogr_70_209 |
| Author(s) : Lahoda M , Mesters JR , Stsiapanava A , Chaloupkova R , Kuty M , Damborsky J , Kuta Smatanova I |
| Ref : Acta Crystallographica D Biol Crystallogr , 70 :209 , 2014 |
| Abstract : |
| PubMedSearch : Lahoda_2014_Acta.Crystallogr.D.Biol.Crystallogr_70_209 |
| PubMedID: 24531456 |
| Gene_locus related to this paper: rhoso-halo1 |
| Title : Differences in crystallization of two LinB variants from Sphingobium japonicum UT26 - Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| Author(s) : Degtjarik O , Chaloupkova R , Rezacova P , Kuty M , Damborsky J , Kuta Smatanova I |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 69 :284 , 2013 |
| Abstract : |
| PubMedSearch : Degtjarik_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_284 |
| PubMedID: 23519805 |
| Gene_locus related to this paper: sphpi-linb |
| Title : Crystallographic analysis of new psychrophilic haloalkane dehalogenases: DpcA from Psychrobacter cryohalolentis K5 and DmxA from Marinobacter sp. ELB17 - Tratsiak_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_683 |
| Author(s) : Tratsiak K , Degtjarik O , Drienovska I , Chrast L , Rezacova P , Kuty M , Chaloupkova R , Damborsky J , Kuta Smatanova I |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 69 :683 , 2013 |
| Abstract : |
| PubMedSearch : Tratsiak_2013_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_69_683 |
| PubMedID: 23722854 |
| Gene_locus related to this paper: 9alte-a3jb27 , psyck-q1qbb9 |
| Title : Atomic resolution studies of haloalkane dehalogenases DhaA04, DhaA14 and DhaA15 with engineered access tunnels - Stsiapanava_2010_Acta.Crystallogr.D.Biol.Crystallogr_66_962 |
| Author(s) : Stsiapanava A , Dohnalek J , Gavira JA , Kuty M , Koudelakova T , Damborsky J , Kuta Smatanova I |
| Ref : Acta Crystallographica D Biol Crystallogr , 66 :962 , 2010 |
| Abstract : |
| PubMedSearch : Stsiapanava_2010_Acta.Crystallogr.D.Biol.Crystallogr_66_962 |
| PubMedID: 20823547 |
| Gene_locus related to this paper: rhoso-halo1 |
| Title : Pathways and mechanisms for product release in the engineered haloalkane dehalogenases explored using classical and random acceleration molecular dynamics simulations - Klvana_2009_J.Mol.Biol_392_1339 |
| Author(s) : Klvana M , Pavlova M , Koudelakova T , Chaloupkova R , Dvorak P , Prokop Z , Stsiapanava A , Kuty M , Kuta-Smatanova I , Dohnalek J , Kulhanek P , Wade RC , Damborsky J |
| Ref : Journal of Molecular Biology , 392 :1339 , 2009 |
| Abstract : |
| PubMedSearch : Klvana_2009_J.Mol.Biol_392_1339 |
| PubMedID: 19577578 |
| Gene_locus related to this paper: rhoso-halo1 |
| Title : Crystallization and preliminary X-ray analysis of a novel haloalkane dehalogenase DbeA from Bradyrhizobium elkani USDA94 - Prudnikova_2009_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_65_353 |
| Author(s) : Prudnikova T , Mozga T , Rezacova P , Chaloupkova R , Sato Y , Nagata Y , Brynda J , Kuty M , Damborsky J , Smatanova IK |
| Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 65 :353 , 2009 |
| Abstract : |
| PubMedSearch : Prudnikova_2009_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_65_353 |
| PubMedID: 19342778 |
| Gene_locus related to this paper: brael-e2rv62 |
| Title : Computational site-directed mutagenesis of haloalkane dehalogenase in position 172 - Damborsky_1998_Protein.Eng_11_901 |
| Author(s) : Damborsky J , Bohac M , Prokop M , Kuty M , Koca J |
| Ref : Protein Engineering , 11 :901 , 1998 |
| Abstract : |
| PubMedSearch : Damborsky_1998_Protein.Eng_11_901 |
| PubMedID: 9862209 |