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PHAZ7_phb_depolymerase

Relationship

Family: PHAZ7_phb_depolymerase

Block: X

Parent Family: No family

Comment

Thermoalkalophilic hydrolase of Paucimonas and Shewanella species with high specificity for amorphous polyesters of short chain-length hydroxyalkanoic acids. An unusual substrate specificity for amorphous poly((R)-3-hydroxyalkanoates PHA and no homologies to any other PHB depolymerase. Formerly included in Lipase_2. Family IX was introduced by Handrick et al. (Arpigny_Jaeger Family IX). Paper: Arpigny and Jaeger (1999).

Database

Interpro : No interpro

PIRSF : No PIRSF

Pdoc : No Pdoc

Pfam : No Pfam

Prints : No Print

EC Number : No EC Number

Sequences

Peptide in Fasta
Nucleotide in Fasta
Alignment with Multalin Text only
Seed alignment with MAFFT No colour
Alignment with MAFFT No colour
Dendrogram The dnd file

References (4)

Title : The structure of PhaZ7 at atomic (1.2 A) resolution reveals details of the active site and suggests a substrate-binding mode - Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648
Author(s) : Wakadkar S , Hermawan S , Jendrossek D , Papageorgiou AC
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 66 :648 , 2010
Abstract : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648
ESTHER : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648
PubMedSearch : Wakadkar_2010_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_66_648
PubMedID: 20516591
Gene_locus related to this paper: psele-PHAZ7

Title : Structural basis of poly(3-hydroxybutyrate) hydrolysis by PhaZ7 depolymerase from Paucimonas lemoignei - Papageorgiou_2008_J.Mol.Biol_382_1184
Author(s) : Papageorgiou AC , Hermawan S , Singh CB , Jendrossek D
Ref : Journal of Molecular Biology , 382 :1184 , 2008
Abstract : Papageorgiou_2008_J.Mol.Biol_382_1184
ESTHER : Papageorgiou_2008_J.Mol.Biol_382_1184
PubMedSearch : Papageorgiou_2008_J.Mol.Biol_382_1184
PubMedID: 18706425
Gene_locus related to this paper: psele-PHAZ7

Title : Crystallization and preliminary X-ray analysis of a novel thermoalkalophilic poly(3-hydroxybutyrate) depolymerase (PhaZ7) from Paucimonas lemoignei - Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479
Author(s) : Kapetaniou EG , Braaz R , Jendrossek D , Papageorgiou AC
Ref : Acta Crystallographica Sect F Struct Biol Cryst Commun , 61 :479 , 2005
Abstract : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479
ESTHER : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479
PubMedSearch : Kapetaniou_2005_Acta.Crystallogr.Sect.F.Struct.Biol.Cryst.Commun_61_479
PubMedID: 16511073
Gene_locus related to this paper: psele-PHAZ7

Title : A new type of thermoalkalophilic hydrolase of Paucimonas lemoignei with high specificity for amorphous polyesters of short chain-length hydroxyalkanoic acids - Handrick_2001_J.Biol.Chem_276_36215
Author(s) : Handrick R , Reinhardt S , Focarete ML , Scandola M , Adamus G , Kowalczuk M , Jendrossek D
Ref : Journal of Biological Chemistry , 276 :36215 , 2001
Abstract : Handrick_2001_J.Biol.Chem_276_36215
ESTHER : Handrick_2001_J.Biol.Chem_276_36215
PubMedSearch : Handrick_2001_J.Biol.Chem_276_36215
PubMedID: 11457823
Gene_locus related to this paper: psele-PHAZ7

Structures (11)

Genes Proteins in PHAZ7_phb_depolymerase family (34)

Fragments of genes in PHAZ7_phb_depolymerase family (3)

Structures in PHAZ7_phb_depolymerase family (11)

Substrates in PHAZ7_phb_depolymerase family (3)

No Inhibitor