Gene_Locus Report

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Gene_locus Report for: plaba-q4z5y0

Plasmodium berghei dnaj domain protein, putative (fragment)

Relationship
Family|ACPH_Peptidase_S9
Block| X
Position in NCBI Life Tree|Plasmodium berghei
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Alveolata: N E > Apicomplexa: N E > Aconoidasida: N E > Haemosporida: N E > Plasmodiidae: N E > Plasmodium: N E > Plasmodium (Vinckeia): N E > Plasmodium berghei: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acid identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : CAAI01000367, XP_676893
Sequence
Graphical view for this peptide sequence: plaba-q4z5y0
Colored MSA for ACPH_Peptidase_S9 (raw)
NICIYWAACGFDVLCVNYIGSLTYTDKPNILNGFVNTIEINDIMAVFQNF
SKHFGDYENVYLYGGSYGGFASCSLLTKSNIFKSGCVINGVYEWILSAYS
SDVPDFFVNLTVNKNTEYDCIFDKHDYAMSYEMSPLNYAQNIKTPVLIIC
SKNDMRVTYHNSIALYNRLRALKKKTKLFLFDDANHSIDNYHYDETILMN
TVLWFYDYDTKKKK
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

NICIYWAACGFDVLCVNYIGSLTYTDKPNILNGFVNTIEINDIMAVFQNF
SKHFGDYENVYLYGGSYGGFASCSLLTKSNIFKSGCVINGVYEWILSAYS
SDVPDFFVNLTVNKNTEYDCIFDKHDYAMSYEMSPLNYAQNIKTPVLIIC
SKNDMRVTYHNSIALYNRLRALKKKTKLFLFDDANHSIDNYHYDETILMN
TVLWFYDYDTKKKK


Reference
    Title: A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses
    Hall N, Karras M, Raine JD, Carlton JM, Kooij TW, Berriman M, Florens L, Janssen CS, Pain A and Sinden RE <20 more author(s)>
    Ref: Science, 307:82, 2005 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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