1. Home
  2. Gene Locus
  3. psebn-f2kd12

psebn-f2kd12

Pseudomonas brassicacearum, Pseudomonas fluorescens, Pseudomonas sp., uncultured bacterium, Putative aromatic-hydrocarbons degradation-related hydrolase

Comment

Other strains: Pseudomonas brassicacearum (strain NFM421) Pseudomonas fluorescens (Q8r1-96\; F113\; Q2-87), Pseudomonas sp. (CFII68\; SHC52)\; uncultured bacterium

Relationship

Family : Carboxymethylbutenolide_lactonase

Block : X

Position in NCBI Life Tree : Pseudomonas brassicacearum

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Pseudomonadales N E > Pseudomonadaceae N E > Pseudomonas N E > Pseudomonas brassicacearum N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MGFVKLAEGD LNYRFDGPQD APVLVLSNSL GTDLHMWDEQ VAAFSEHFRV LRFDTRGHGQ SLVTEGPYSI EQLGRDVLAM LDQLNLDKVH FCGLSMGGLI GQWLGINAGE RLHKLVVCNT AAKIGDPSGW NPRIETVLRD GKAAMVALRD ASIARWFTPD FAEAQPATAK KITDMLAATS PQGYAANCAA VRDADFREQL SSIRVPLLVI AGTEDAVTPP SGGHFIQERV RGAEYAEFYA AHLSNVQAGA AFSARVLDFL LDSGRA

References (5)

Title : Genome Sequence of Pseudomonas brassicacearum DF41 - Loewen_2014_Genome.Announc_2_e00390
Author(s) : Loewen PC , Switala J , Fernando WG , de Kievit T
Ref : Genome Announc , 2 :e00390 , 2014
Abstract :
PubMedSearch : Loewen_2014_Genome.Announc_2_e00390
PubMedID: 24812222
Gene_locus related to this paper: psebn-f2kd12 , 9psed-s6i647 , 9psed-w8psd7

Title : Heterologous viral expression systems in fosmid vectors increase the functional analysis potential of metagenomic libraries - Terron-Gonzalez_2013_Sci.Rep_3_1107
Author(s) : Terron-Gonzalez L , Medina C , Limon-Mortes MC , Santero E
Ref : Sci Rep , 3 :1107 , 2013
Abstract :
PubMedSearch : Terron-Gonzalez_2013_Sci.Rep_3_1107
PubMedID: 23346364
Gene_locus related to this paper: psebn-f2kd12

Title : Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions - Loper_2012_PLoS.Genet_8_e1002784
Author(s) : Loper JE , Hassan KA , Mavrodi DV , Davis EW, 2nd , Lim CK , Shaffer BT , Elbourne LD , Stockwell VO , Hartney SL , Breakwell K , Henkels MD , Tetu SG , Rangel LI , Kidarsa TA , Wilson NL , van de Mortel JE , Song C , Blumhagen R , Radune D , Hostetler JB , Brinkac LM , Durkin AS , Kluepfel DA , Wechter WP , Anderson AJ , Kim YC , Pierson LS, 3rd , Pierson EA , Lindow SE , Kobayashi DY , Raaijmakers JM , Weller DM , Thomashow LS , Allen AE , Paulsen IT
Ref : PLoS Genet , 8 :e1002784 , 2012
Abstract :
PubMedSearch : Loper_2012_PLoS.Genet_8_e1002784
PubMedID: 22792073
Gene_locus related to this paper: psebn-f2kd12 , psefl-e2xn15 , psefs-c3k632 , psepf-q3k919 , psebn-f2k9f6 , psefl-i2br68 , psefl-i4k4a8 , 9psed-i4l6c7 , 9psed-i4xqw9 , psefl-j2epr2 , 9psed-j2ew12 , psefs-c3k813 , psefl-w2f4e5 , 9psed-s6i647 , 9psed-j2wmk3 , 9psed-i4kt90 , 9psed-a0a068aip7 , 9psed-j2nei8 , 9psed-i4kw69 , psefl-i2bvr1 , psefl-j2mu40 , 9psed-j2ync4

Title : Genome sequence of the biocontrol strain Pseudomonas fluorescens F113 - Redondo-Nieto_2012_J.Bacteriol_194_1273
Author(s) : Redondo-Nieto M , Barret M , Morrisey JP , Germaine K , Martinez-Granero F , Barahona E , Navazo A , Sanchez-Contreras M , Moynihan JA , Giddens SR , Coppoolse ER , Muriel C , Stiekema WJ , Rainey PB , Dowling D , O'Gara F , Martin M , Rivilla R
Ref : Journal of Bacteriology , 194 :1273 , 2012
Abstract :
PubMedSearch : Redondo-Nieto_2012_J.Bacteriol_194_1273
PubMedID: 22328765
Gene_locus related to this paper: psebn-f2kd12 , psefl-g8pzx3 , 9psed-s6i647

Title : Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum - Ortet_2011_J.Bacteriol_193_3146
Author(s) : Ortet P , Barakat M , Lalaouna D , Fochesato S , Barbe V , Vacherie B , Santaella C , Heulin T , Achouak W
Ref : Journal of Bacteriology , 193 :3146 , 2011
Abstract :
PubMedSearch : Ortet_2011_J.Bacteriol_193_3146
PubMedID: 21515771
Gene_locus related to this paper: psebn-f2k6b7 , psebn-f2k6e0 , psebn-f2kcw9 , psebn-f2kd12 , psebn-f2khr7 , psebr-lipa , psepf-PHAZ , psebn-f2k9f6 , 9psed-s6i647