Barbe V

References (56)

Title : Polysaccharide utilisation loci of Bacteroidetes from two contrasting open ocean sites in the North Atlantic - Bennke_2016_Environ.Microbiol_18_4456
Author(s) : Bennke CM , Kruger K , Kappelmann L , Huang S , Gobet A , Schuler M , Barbe V , Fuchs BM , Michel G , Teeling H , Amann RI
Ref : Environ Microbiol , 18 :4456 , 2016
PubMedID: 27348854
Gene_locus related to this paper: 9bact-a0a1b2ypb1

Title : Structural and functional partitioning of bread wheat chromosome 3B - Choulet_2014_Science_345_1249721
Author(s) : Choulet F , Alberti A , Theil S , Glover N , Barbe V , Daron J , Pingault L , Sourdille P , Couloux A , Paux E , Leroy P , Mangenot S , Guilhot N , Le Gouis J , Balfourier F , Alaux M , Jamilloux V , Poulain J , Durand C , Bellec A , Gaspin C , Safar J , Dolezel J , Rogers J , Vandepoele K , Aury JM , Mayer K , Berges H , Quesneville H , Wincker P , Feuillet C
Ref : Science , 345 :1249721 , 2014
PubMedID: 25035497
Gene_locus related to this paper: wheat-a0a080yuw6 , wheat-w5d1z6 , wheat-a0a077rex4 , wheat-a0a077s1q2

Title : Comparative genomic analysis provides insights into the evolution and niche adaptation of marine Magnetospira sp. QH-2 strain - Ji_2014_Environ.Microbiol_16_525
Author(s) : Ji B , Zhang SD , Arnoux P , Rouy Z , Alberto F , Philippe N , Murat D , Zhang WJ , Rioux JB , Ginet N , Sabaty M , Mangenot S , Pradel N , Tian J , Yang J , Zhang L , Zhang W , Pan H , Henrissat B , Coutinho PM , Li Y , Xiao T , Medigue C , Barbe V , Pignol D , Talla E , Wu LF
Ref : Environ Microbiol , 16 :525 , 2014
PubMedID: 23841906
Gene_locus related to this paper: 9prot-w6k5m7 , 9prot-w6khf2 , 9prot-w6kbu9

Title : Genomic analysis of smooth tubercle bacilli provides insights into ancestry and pathoadaptation of Mycobacterium tuberculosis - Supply_2013_Nat.Genet_45_172
Author(s) : Supply P , Marceau M , Mangenot S , Roche D , Rouanet C , Khanna V , Majlessi L , Criscuolo A , Tap J , Pawlik A , Fiette L , Orgeur M , Fabre M , Parmentier C , Frigui W , Simeone R , Boritsch EC , Debrie AS , Willery E , Walker D , Quail MA , Ma L , Bouchier C , Salvignol G , Sayes F , Cascioferro A , Seemann T , Barbe V , Locht C , Gutierrez MC , Leclerc C , Bentley SD , Stinear TP , Brisse S , Medigue C , Parkhill J , Cruveiller S , Brosch R
Ref : Nat Genet , 45 :172 , 2013
PubMedID: 23291586
Gene_locus related to this paper: mycmm-b2ht49 , myctu-cut3 , myctu-cutas1 , myctu-cutas2 , myctu-Rv1069c , myctu-RV1215C , myctu-RV1758 , myctu-Rv2045c , myctu-RV3452 , myctu-RV3724 , myctu-Rv3802c

Title : Genome Sequence of Halomonas sp. Strain A3H3, Isolated from Arsenic-Rich Marine Sediments - Koechler_2013_Genome.Announc_1_e00819
Author(s) : Koechler S , Plewniak F , Barbe V , Battaglia-Brunet F , Jost B , Joulian C , Philipps M , Vicaire S , Vincent S , Ye T , Bertin PN
Ref : Genome Announc , 1 : , 2013
PubMedID: 24115546
Gene_locus related to this paper: 9gamm-t2l9f4 , 9gamm-t2l8b8

Title : Life in an arsenic-containing gold mine: genome and physiology of the autotrophic arsenite-oxidizing bacterium rhizobium sp. NT-26 - Andres_2013_Genome.Biol.Evol_5_934
Author(s) : Andres J , Arsene-Ploetze F , Barbe V , Brochier-Armanet C , Cleiss-Arnold J , Coppee JY , Dillies MA , Geist L , Joublin A , Koechler S , Lassalle F , Marchal M , Medigue C , Muller D , Nesme X , Plewniak F , Proux C , Ramirez-Bahena MH , Schenowitz C , Sismeiro O , Vallenet D , Santini JM , Bertin PN
Ref : Genome Biol Evol , 5 :934 , 2013
PubMedID: 23589360
Gene_locus related to this paper: rhisp-l0nkx2 , 9rhiz-l0net0

Title : Genome sequence of Xanthomonas fuscans subsp. fuscans strain 4834-R reveals that flagellar motility is not a general feature of xanthomonads - Darrasse_2013_BMC.Genomics_14_761
Author(s) : Darrasse A , Carrere S , Barbe V , Boureau T , Arrieta-Ortiz ML , Bonneau S , Briand M , Brin C , Cociancich S , Durand K , Fouteau S , Gagnevin L , Guerin F , Guy E , Indiana A , Koebnik R , Lauber E , Munoz A , Noel LD , Pieretti I , Poussier S , Pruvost O , Robene-Soustrade I , Rott P , Royer M , Serres-Giardi L , Szurek B , Van Sluys MA , Verdier V , Verniere C , Arlat M , Manceau C , Jacques MA
Ref : BMC Genomics , 14 :761 , 2013
PubMedID: 24195767
Gene_locus related to this paper: xanax-estA1 , xanax-XAC1213 , xanax-XAC2987 , xanax-XAC3315 , xanax-XAC4055 , xanor-q5h5n1

Title : The rhizome of the multidrug-resistant Enterobacter aerogenes genome reveals how new killer bugs are created because of a sympatric lifestyle - Diene_2013_Mol.Biol.Evol_30_369
Author(s) : Diene SM , Merhej V , Henry M , El Filali A , Roux V , Robert C , Azza S , Gavory F , Barbe V , La Scola B , Raoult D , Rolain JM
Ref : Molecular Biology Evolution , 30 :369 , 2013
PubMedID: 23071100
Gene_locus related to this paper: entak-g0ea28 , entae-l8bq29 , entae-y1gc81 , entae-y1evy4

Title : Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z - Vuilleumier_2012_J.Bacteriol_194_551
Author(s) : Vuilleumier S , Khmelenina VN , Bringel F , Reshetnikov AS , Lajus A , Mangenot S , Rouy Z , Op den Camp HJ , Jetten MS , DiSpirito AA , Dunfield P , Klotz MG , Semrau JD , Stein LY , Barbe V , Medigue C , Trotsenko YA , Kalyuzhnaya MG
Ref : Journal of Bacteriology , 194 :551 , 2012
PubMedID: 22207753

Title : Genome sequence of radiation-resistant Modestobacter marinus strain BC501, a representative actinobacterium that thrives on calcareous stone surfaces - Normand_2012_J.Bacteriol_194_4773
Author(s) : Normand P , Gury J , Pujic P , Chouaia B , Crotti E , Brusetti L , Daffonchio D , Vacherie B , Barbe V , Medigue C , Calteau A , Ghodhbane-Gtari F , Essoussi I , Nouioui I , Abbassi-Ghozzi I , Gtari M
Ref : Journal of Bacteriology , 194 :4773 , 2012
PubMedID: 22887672
Gene_locus related to this paper: modmb-i4eyb4 , modmb-i4f114 , modmb-i4f525 , modmb-i4f4c1

Title : Genome sequence of the marine bacterium Marinobacter hydrocarbonoclasticus SP17, which forms biofilms on hydrophobic organic compounds - Grimaud_2012_J.Bacteriol_194_3539
Author(s) : Grimaud R , Ghiglione JF , Cagnon C , Lauga B , Vaysse PJ , Rodriguez-Blanco A , Mangenot S , Cruveiller S , Barbe V , Duran R , Wu LF , Talla E , Bonin P , Michotey V
Ref : Journal of Bacteriology , 194 :3539 , 2012
PubMedID: 22689231
Gene_locus related to this paper: marav-a1u338 , marhy-h8w622 , marhy-h8w685 , marav-a1u1j6

Title : Pichia sorbitophila, an Interspecies Yeast Hybrid, Reveals Early Steps of Genome Resolution After Polyploidization - Louis_2012_G3.(Bethesda)_2_299
Author(s) : Louis VL , Despons L , Friedrich A , Martin T , Durrens P , Casaregola S , Neuveglise C , Fairhead C , Marck C , Cruz JA , Straub ML , Kugler V , Sacerdot C , Uzunov Z , Thierry A , Weiss S , Bleykasten C , De Montigny J , Jacques N , Jung P , Lemaire M , Mallet S , Morel G , Richard GF , Sarkar A , Savel G , Schacherer J , Seret ML , Talla E , Samson G , Jubin C , Poulain J , Vacherie B , Barbe V , Pelletier E , Sherman DJ , Westhof E , Weissenbach J , Baret PV , Wincker P , Gaillardin C , Dujon B , Souciet JL
Ref : G3 (Bethesda) , 2 :299 , 2012
PubMedID: 22384408
Gene_locus related to this paper: picso-g8ycc9 , picso-g8yet0 , picso-g8yb96 , picso-g8ym39 , erecy-g8jrp5 , picso-g8y652

Title : Genome sequence of the human- and animal-pathogenic strain Nocardia cyriacigeorgica GUH-2 - Zoropogui_2012_J.Bacteriol_194_2098
Author(s) : Zoropogui A , Pujic P , Normand P , Barbe V , Beaman B , Beaman L , Boiron P , Colinon C , Deredjian A , Graindorge A , Mangenot S , Nazaret S , Neto M , Petit S , Roche D , Vallenet D , Rodriguez-Nava V , Richard Y , Cournoyer B , Blaha D
Ref : Journal of Bacteriology , 194 :2098 , 2012
PubMedID: 22461543
Gene_locus related to this paper: noccg-h6r1f5 , noccg-h6r6y9 , noccg-h6r479 , noccg-h6rch6 , noccg-h6r8b1 , noccg-h6r6b6 , noccg-h6r249 , noccg-h6r9n3 , noccg-h6r4q8 , noccg-h6rbg1 , noccg-h6r7g5 , noccg-h6r481 , noccg-h6r0w3 , noccg-h6r3f1

Title : Sequencing of the smallest Apicomplexan genome from the human pathogen Babesia microti - Cornillot_2012_Nucleic.Acids.Res_40_9102
Author(s) : Cornillot E , Hadj-Kaddour K , Dassouli A , Noel B , Ranwez V , Vacherie B , Augagneur Y , Bres V , Duclos A , Randazzo S , Carcy B , Debierre-Grockiego F , Delbecq S , Moubri-Menage K , Shams-Eldin H , Usmani-Brown S , Bringaud F , Wincker P , Vivares CP , Schwarz RT , Schetters TP , Krause PJ , Gorenflot A , Berry V , Barbe V , Ben Mamoun C
Ref : Nucleic Acids Research , 40 :9102 , 2012
PubMedID: 22833609
Gene_locus related to this paper: babmi-i7isy5

Title : Complete genome sequence of a beneficial plant root-associated bacterium, Pseudomonas brassicacearum - Ortet_2011_J.Bacteriol_193_3146
Author(s) : Ortet P , Barakat M , Lalaouna D , Fochesato S , Barbe V , Vacherie B , Santaella C , Heulin T , Achouak W
Ref : Journal of Bacteriology , 193 :3146 , 2011
PubMedID: 21515771
Gene_locus related to this paper: psebn-f2k6b7 , psebn-f2k6e0 , psebn-f2kcw9 , psebn-f2kd12 , psebn-f2khr7 , psebr-lipa , psepf-PHAZ , psebn-f2k9f6 , 9psed-s6i647

Title : The Medicago genome provides insight into the evolution of rhizobial symbioses - Young_2011_Nature_480_520
Author(s) : Young ND , Debelle F , Oldroyd GE , Geurts R , Cannon SB , Udvardi MK , Benedito VA , Mayer KF , Gouzy J , Schoof H , Van de Peer Y , Proost S , Cook DR , Meyers BC , Spannagl M , Cheung F , De Mita S , Krishnakumar V , Gundlach H , Zhou S , Mudge J , Bharti AK , Murray JD , Naoumkina MA , Rosen B , Silverstein KA , Tang H , Rombauts S , Zhao PX , Zhou P , Barbe V , Bardou P , Bechner M , Bellec A , Berger A , Berges H , Bidwell S , Bisseling T , Choisne N , Couloux A , Denny R , Deshpande S , Dai X , Doyle JJ , Dudez AM , Farmer AD , Fouteau S , Franken C , Gibelin C , Gish J , Goldstein S , Gonzalez AJ , Green PJ , Hallab A , Hartog M , Hua A , Humphray SJ , Jeong DH , Jing Y , Jocker A , Kenton SM , Kim DJ , Klee K , Lai H , Lang C , Lin S , Macmil SL , Magdelenat G , Matthews L , McCorrison J , Monaghan EL , Mun JH , Najar FZ , Nicholson C , Noirot C , O'Bleness M , Paule CR , Poulain J , Prion F , Qin B , Qu C , Retzel EF , Riddle C , Sallet E , Samain S , Samson N , Sanders I , Saurat O , Scarpelli C , Schiex T , Segurens B , Severin AJ , Sherrier DJ , Shi R , Sims S , Singer SR , Sinharoy S , Sterck L , Viollet A , Wang BB , Wang K , Wang M , Wang X , Warfsmann J , Weissenbach J , White DD , White JD , Wiley GB , Wincker P , Xing Y , Yang L , Yao Z , Ying F , Zhai J , Zhou L , Zuber A , Denarie J , Dixon RA , May GD , Schwartz DC , Rogers J , Quetier F , Town CD , Roe BA
Ref : Nature , 480 :520 , 2011
PubMedID: 22089132
Gene_locus related to this paper: medtr-b7fki4 , medtr-b7fmi1 , medtr-g7itl1 , medtr-g7iu67 , medtr-g7izm0 , medtr-g7j641 , medtr-g7jtf8 , medtr-g7jtg2 , medtr-g7jtg4 , medtr-g7kem3 , medtr-g7kml3 , medtr-g7ksx5 , medtr-g7leb3 , medtr-q1s5d8 , medtr-q1s9m3 , medtr-q1t171 , medtr-g7k9e1 , medtr-g7k9e3 , medtr-g7k9e5 , medtr-g7k9e8 , medtr-g7k9e9 , medtr-g7lbp2 , medtr-g7lch3 , medtr-g7ib94 , medtr-g7ljk8 , medtr-g7i6w5 , medtr-g7kvg4 , medtr-g7iam1 , medtr-g7iam3 , medtr-g7l754 , medtr-g7jr41 , medtr-g7l4f5 , medtr-g7l755 , medtr-a0a072vyl4 , medtr-g7jwk8 , medtr-a0a072vhg0 , medtr-a0a072vrv9 , medtr-g7kmk5 , medtr-a0a072uuf6 , medtr-a0a072urp3 , medtr-g7zzc3 , medtr-g7ie19 , medtr-g7kst7 , medtr-a0a072u5k5 , medtr-a0a072v056 , medtr-scp1 , medtr-g7kyn0 , medtr-g7inw6 , medtr-g7j3q3

Title : Complete genome sequence of Streptomyces cattleya NRRL 8057, a producer of antibiotics and fluorometabolites - Barbe_2011_J.Bacteriol_193_5055
Author(s) : Barbe V , Bouzon M , Mangenot S , Badet B , Poulain J , Segurens B , Vallenet D , Marliere P , Weissenbach J
Ref : Journal of Bacteriology , 193 :5055 , 2011
PubMedID: 21868806
Gene_locus related to this paper: stren-f8jjf8 , stren-f8jk65 , stren-f8jly2 , stren-f8jm04 , stren-f8juv4 , stren-f8k466 , stren-f8jvj2 , stren-f8k4s8

Title : PCR-based identification of Klebsiella pneumoniae subsp. rhinoscleromatis, the agent of rhinoscleroma - Fevre_2011_PLoS.Negl.Trop.Dis_5_e1052
Author(s) : Fevre C , Passet V , Deletoile A , Barbe V , Frangeul L , Almeida AS , Sansonetti P , Tournebize R , Brisse S
Ref : PLoS Negl Trop Dis , 5 :e1052 , 2011
PubMedID: 21629720
Gene_locus related to this paper: klep7-a6t9v6 , klep7-y1077 , klepn-w8uta0

Title : Azospirillum genomes reveal transition of bacteria from aquatic to terrestrial environments - Wisniewski-Dye_2011_PLoS.Genet_7_e1002430
Author(s) : Wisniewski-Dye F , Borziak K , Khalsa-Moyers G , Alexandre G , Sukharnikov LO , Wuichet K , Hurst GB , McDonald WH , Robertson JS , Barbe V , Calteau A , Rouy Z , Mangenot S , Prigent-Combaret C , Normand P , Boyer M , Siguier P , Dessaux Y , Elmerich C , Condemine G , Krishnen G , Kennedy I , Paterson AH , Gonzalez V , Mavingui P , Zhulin IB
Ref : PLoS Genet , 7 :e1002430 , 2011
PubMedID: 22216014
Gene_locus related to this paper: azobr-g8al65 , azol4-g7zc95 , azol4-g7zc98 , azol4-g7zfp9 , azol4-g7zcr5 , azobr-g8b0i6

Title : Complete genome sequence of the fish pathogen Flavobacterium branchiophilum - Touchon_2011_Appl.Environ.Microbiol_77_7656
Author(s) : Touchon M , Barbier P , Bernardet JF , Loux V , Vacherie B , Barbe V , Rocha EP , Duchaud E
Ref : Applied Environmental Microbiology , 77 :7656 , 2011
PubMedID: 21926215
Gene_locus related to this paper: flabf-g2z3q6

Title : Ralstonia syzygii, the Blood Disease Bacterium and some Asian R. solanacearum strains form a single genomic species despite divergent lifestyles - Remenant_2011_PLoS.One_6_e24356
Author(s) : Remenant B , de Cambiaire JC , Cellier G , Jacobs JM , Mangenot S , Barbe V , Lajus A , Vallenet D , Medigue C , Fegan M , Allen C , Prior P
Ref : PLoS ONE , 6 :e24356 , 2011
PubMedID: 21931687
Gene_locus related to this paper: 9rals-g2zrs4 , 9rals-g3a1g4 , ralsl-a0a072zy50 , 9rals-g3a7g7

Title : The arthrobacter arilaitensis Re117 genome sequence reveals its genetic adaptation to the surface of cheese - Monnet_2010_PLoS.One_5_e15489
Author(s) : Monnet C , Loux V , Gibrat JF , Spinnler E , Barbe V , Vacherie B , Gavory F , Gourbeyre E , Siguier P , Chandler M , Elleuch R , Irlinger F , Vallaeys T
Ref : PLoS ONE , 5 :e15489 , 2010
PubMedID: 21124797
Gene_locus related to this paper: artar-e1vw31 , artar-e1vwy8

Title : Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence - Remenant_2010_BMC.Genomics_11_379
Author(s) : Remenant B , Coupat-Goutaland B , Guidot A , Cellier G , Wicker E , Allen C , Fegan M , Pruvost O , Elbaz M , Calteau A , Salvignol G , Mornico D , Mangenot S , Barbe V , Medigue C , Prior P
Ref : BMC Genomics , 11 :379 , 2010
PubMedID: 20550686
Gene_locus related to this paper: ralsl-d8p4i2 , ralso-d8njk6 , ralso-PCAD , ralso-PCAD2 , ralso-PHAZ , ralso-PHBC , ralso-RSC0439 , ralso-RSC0563 , ralso-RSC0604 , ralso-RSC1003 , ralso-RSC1344 , ralso-RSC1772 , ralso-RSC1804 , ralso-RSC1811 , ralso-RSC1887 , ralso-RSC2149 , ralso-RSC2228 , ralso-RSC2781 , ralso-RSC3346 , ralso-RSP0196 , ralso-RSP0795 , ralso-RSP1108 , ralso-RSP1248 , ralso-RSP1521 , ralsl-d8ny30 , ralsl-y0kx85 , ralsl-a0a072zy50

Title : Comparative genomic and proteomic analyses of two Mycoplasma agalactiae strains: clues to the macro- and micro-events that are shaping mycoplasma diversity - Nouvel_2010_BMC.Genomics_11_86
Author(s) : Nouvel LX , Sirand-Pugnet P , Marenda MS , Sagne E , Barbe V , Mangenot S , Schenowitz C , Jacob D , Barre A , Claverol S , Blanchard A , Citti C
Ref : BMC Genomics , 11 :86 , 2010
PubMedID: 20122262
Gene_locus related to this paper: myca6-d3vqz4 , mycap-a5ixe1 , mycap-a5ixe2 , mycap-a5ixk0 , mycap-a5ixt9 , mycap-a5iy19 , mycap-a5iza3 , mycap-a5ixl0

Title : Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence - Fonknechten_2010_BMC.Genomics_11_555
Author(s) : Fonknechten N , Chaussonnerie S , Tricot S , Lajus A , Andreesen JR , Perchat N , Pelletier E , Gouyvenoux M , Barbe V , Salanoubat M , Le Paslier D , Weissenbach J , Cohen GN , Kreimeyer A
Ref : BMC Genomics , 11 :555 , 2010
PubMedID: 20937090

Title : The complete genome of Propionibacterium freudenreichii CIRM-BIA1, a hardy actinobacterium with food and probiotic applications - Falentin_2010_PLoS.ONE_5_E11748
Author(s) : Falentin H , Deutsch SM , Jan G , Loux V , Thierry A , Parayre S , Maillard MB , Dherbecourt J , Cousin FJ , Jardin J , Siguier P , Couloux A , Barbe V , Vacherie B , Wincker P , Gibrat JF , Gaillardin C , Lortal S
Ref : PLoS ONE , 5 :e11748 , 2010
PubMedID: 20668525
Gene_locus related to this paper: profr-b3cky9 , profr-b3ckz1 , profr-b3ckz0 , profr-b3cky3

Title : Complete genome sequence of Crohn's disease-associated adherent-invasive E. coli strain LF82 - Miquel_2010_PLoS.One_5_e12714
Author(s) : Miquel S , Peyretaillade E , Claret L , de Vallee A , Dossat C , Vacherie B , Zineb el H , Segurens B , Barbe V , Sauvanet P , Neut C , Colombel JF , Medigue C , Mojica FJ , Peyret P , Bonnet R , Darfeuille-Michaud A
Ref : PLoS ONE , 5 : , 2010
PubMedID: 20862302
Gene_locus related to this paper: ecoli-yeiG , ecoli-yqia

Title : Fine-scale evolution: genomic, phenotypic and ecological differentiation in two coexisting Salinibacter ruber strains - Pena_2010_ISME.J_4_882
Author(s) : Pena A , Teeling H , Huerta-Cepas J , Santos F , Yarza P , Brito-Echeverria J , Lucio M , Schmitt-Kopplin P , Meseguer I , Schenowitz C , Dossat C , Barbe V , Dopazo J , Rossello-Mora R , Schuler M , Glockner FO , Amann R , Gabaldon T , Anton J
Ref : Isme J , 4 :882 , 2010
PubMedID: 20164864
Gene_locus related to this paper: salrd-q2rzy1 , salrd-q2s0e4 , salrd-q2s1i8

Title : Life on arginine for Mycoplasma hominis: clues from its minimal genome and comparison with other human urogenital mycoplasmas - Pereyre_2009_PLoS.Genet_5_e1000677
Author(s) : Pereyre S , Sirand-Pugnet P , Beven L , Charron A , Renaudin H , Barre A , Avenaud P , Jacob D , Couloux A , Barbe V , de Daruvar A , Blanchard A , Bebear C
Ref : PLoS Genet , 5 :e1000677 , 2009
PubMedID: 19816563
Gene_locus related to this paper: mychp-d1j8v6

Title : The complete genome sequence of Xanthomonas albilineans provides new insights into the reductive genome evolution of the xylem-limited Xanthomonadaceae - Pieretti_2009_BMC.Genomics_10_616
Author(s) : Pieretti I , Royer M , Barbe V , Carrere S , Koebnik R , Cociancich S , Couloux A , Darrasse A , Gouzy J , Jacques MA , Lauber E , Manceau C , Mangenot S , Poussier S , Segurens B , Szurek B , Verdier V , Arlat M , Rott P
Ref : BMC Genomics , 10 :616 , 2009
PubMedID: 20017926
Gene_locus related to this paper: xanal-q53b17 , xanap-d2u924 , xanap-d2uar7 , xanap-d2ub15 , xanap-d2ucz4 , xanap-d2ue41 , xanap-d2ue72 , xanap-d2ueb5 , xanap-d2uf40 , xanap-d2ugg6 , xanap-d2ugj3 , xanap-d2ugr3 , xanap-d2ugv1 , xanap-d2ubh2 , xanap-d2ud71 , xanap-d2u9n1 , xanap-d2uci9

Title : From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later - Barbe_2009_Microbiology_155_1758
Author(s) : Barbe V , Cruveiller S , Kunst F , Lenoble P , Meurice G , Sekowska A , Vallenet D , Wang T , Moszer I , Medigue C , Danchin A
Ref : Microbiology , 155 :1758 , 2009
PubMedID: 19383706

Title : Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti - de Groot_2009_PLoS.Genet_5_e1000434
Author(s) : de Groot A , Dulermo R , Ortet P , Blanchard L , Guerin P , Fernandez B , Vacherie B , Dossat C , Jolivet E , Siguier P , Chandler M , Barakat M , Dedieu A , Barbe V , Heulin T , Sommer S , Achouak W , Armengaud J
Ref : PLoS Genet , 5 :e1000434 , 2009
PubMedID: 19370165
Gene_locus related to this paper: deidv-c1cva5 , deidv-c1cvi6 , deidv-c1cwe6 , deidv-c1cwk6 , deidv-c1cxm7 , deidv-c1cy72 , deidv-c1d002 , deidv-c1d2d8 , deidv-c1d3d8 , deidv-c1d3p0 , deidv-c1cxw0 , deidv-c1d2x1 , deidv-c1cvt7

Title : Non mycobacterial virulence genes in the genome of the emerging pathogen Mycobacterium abscessus - Ripoll_2009_PLoS.One_4_e5660
Author(s) : Ripoll F , Pasek S , Schenowitz C , Dossat C , Barbe V , Rottman M , Macheras E , Heym B , Herrmann JL , Daffe M , Brosch R , Risler JL , Gaillard JL
Ref : PLoS ONE , 4 :e5660 , 2009
PubMedID: 19543527

Title : Genome sequences of Escherichia coli B strains REL606 and BL21(DE3) - Jeong_2009_J.Mol.Biol_394_644
Author(s) : Jeong H , Barbe V , Lee CH , Vallenet D , Yu DS , Choi SH , Couloux A , Lee SW , Yoon SH , Cattolico L , Hur CG , Park HS , Segurens B , Kim SC , Oh TK , Lenski RE , Studier FW , Daegelen P , Kim JF
Ref : Journal of Molecular Biology , 394 :644 , 2009
PubMedID: 19786035
Gene_locus related to this paper: eco57-b3a913 , ecoli-Aes , ecoli-rutD , ecoli-bioh , ecoli-dlhh , ecoli-entf , ecoli-fes , ecoli-mhpc , ecoli-pldb , ecoli-ptrb , ecoli-yafa , ecoli-yaim , ecoli-ybff , ecoli-ycfp , ecoli-ycjy , ecoli-yeiG , ecoli-YFBB , ecoli-yghX , ecoli-yhet , ecoli-yiel , ecoli-yjfp , ecoli-YNBC , ecoli-ypfh , ecoli-yqia , ecoli-YfhR

Title : Being pathogenic, plastic, and sexual while living with a nearly minimal bacterial genome - Sirand-Pugnet_2007_PLoS.Genet_3_e75
Author(s) : Sirand-Pugnet P , Lartigue C , Marenda M , Jacob D , Barre A , Barbe V , Schenowitz C , Mangenot S , Couloux A , Segurens B , de Daruvar A , Blanchard A , Citti C
Ref : PLoS Genet , 3 :e75 , 2007
PubMedID: 17511520
Gene_locus related to this paper: mycap-a5ixe1 , mycap-a5ixe2 , mycap-a5ixk0 , mycap-a5ixt9 , mycap-a5iy19 , mycap-a5iza3 , mycap-a5ixl0

Title : Legumes symbioses: absence of Nod genes in photosynthetic bradyrhizobia - Giraud_2007_Science_316_1307
Author(s) : Giraud E , Moulin L , Vallenet D , Barbe V , Cytryn E , Avarre JC , Jaubert M , Simon D , Cartieaux F , Prin Y , Bena G , Hannibal L , Fardoux J , Kojadinovic M , Vuillet L , Lajus A , Cruveiller S , Rouy Z , Mangenot S , Segurens B , Dossat C , Franck WL , Chang WS , Saunders E , Bruce D , Richardson P , Normand P , Dreyfus B , Pignol D , Stacey G , Emerich D , Vermeglio A , Medigue C , Sadowsky M
Ref : Science , 316 :1307 , 2007
PubMedID: 17540897
Gene_locus related to this paper: brasb-a5e8s7 , brasb-a5e9h9 , brasb-a5e9x2 , brasb-a5eac3 , brasb-a5eb24 , brasb-a5ech6 , brasb-a5eck9 , brasb-a5ed44 , brasb-a5edz7 , brasb-a5ee62 , brasb-a5ees1 , brasb-a5ef53 , brasb-a5efp3 , brasb-a5efp4 , brasb-a5eg29 , brasb-a5eh09 , brasb-a5ei81 , brasb-a5eiy7 , brasb-a5ej26 , brasb-a5ek41 , brasb-a5elh0 , brasb-a5ema7 , brasb-a5emc8 , brasb-a5eml7 , brasb-a5ene5 , brasb-a5ent6 , brasb-a5eny8 , brasb-a5ep81 , brasb-a5eph8 , brasb-a5epv4 , brasb-a5epx9 , brasb-a5eqb3 , brasb-a5erc8 , brasb-a5esb1 , brasb-a5ese9 , brasb-a5esl7 , brasb-a5esv5 , brasb-a5esw6 , brasb-a5etk7 , brasb-a5eul1 , braso-a4yk16 , braso-a4yl66 , braso-a4ylm4 , braso-a4ylr9 , braso-a4ylx7 , braso-a4ymj8 , braso-a4ynl1 , braso-a4ypd9 , braso-a4yqh3 , braso-a4yr10 , braso-a4yri0 , braso-a4yt56 , braso-a4yul4 , braso-a4yw76 , braso-a4ywb6 , braso-a4yxg2 , braso-a4yy49 , braso-a4yyj6 , braso-a4yzd7 , braso-a4yzh0 , braso-a4z0q9 , braso-a4z0v7 , braso-a4z1h1 , braso-a4z1p1 , braso-a4z1p8 , braso-a4z1v6 , braso-a4z2a5 , braso-a4z152 , braso-a4yl32 , brasb-a5et63 , brasb-a5emr8 , braso-a4ynl2 , brasb-a5eqb2 , braso-a4yr63

Title : The complete genome sequence of Lactobacillus bulgaricus reveals extensive and ongoing reductive evolution - van de Guchte_2006_Proc.Natl.Acad.Sci.U.S.A_103_9274
Author(s) : van de Guchte M , Penaud S , Grimaldi C , Barbe V , Bryson K , Nicolas P , Robert C , Oztas S , Mangenot S , Couloux A , Loux V , Dervyn R , Bossy R , Bolotin A , Batto JM , Walunas T , Gibrat JF , Bessieres P , Weissenbach J , Ehrlich SD , Maguin E
Ref : Proc Natl Acad Sci U S A , 103 :9274 , 2006
PubMedID: 16754859
Gene_locus related to this paper: lacda-q1g8l1 , lacdb-q04ci8 , lacdb-q04cw3 , lacdl-pepx , lacdl-pip

Title : Evolution of the terminal regions of the Streptomyces linear chromosome - Choulet_2006_Mol.Biol.Evol_23_2361
Author(s) : Choulet F , Aigle B , Gallois A , Mangenot S , Gerbaud C , Truong C , Francou FX , Fourrier C , Guerineau M , Decaris B , Barbe V , Pernodet JL , Leblond P
Ref : Molecular Biology Evolution , 23 :2361 , 2006
PubMedID: 16956972
Gene_locus related to this paper: stram-a0abw5 , stram-a0ac15 , stram-a0ac26 , stram-a0ac27 , stram-a0acp3 , stram-a0acq4 , stram-a0acx2.1 , stram-a0acx2.2 , stram-a0adx4 , stram-a0aeb0 , stram-a3ki49 , stram-a3ki77 , stram-a3ki84 , stram-a3ki91 , stram-a3kik7 , stram-a3kj27 , stram-a3kkf9 , stram-a3kkk4 , stram-a3kkk5 , stram-q1rrf2 , strco-SCF11.06 , strco-SCO7057 , stram-a0acr7

Title : Intraspecific variability of the terminal inverted repeats of the linear chromosome of Streptomyces ambofaciens - Choulet_2006_J.Bacteriol_188_6599
Author(s) : Choulet F , Gallois A , Aigle B , Mangenot S , Gerbaud C , Truong C , Francou FX , Borges F , Fourrier C , Guerineau M , Decaris B , Barbe V , Pernodet JL , Leblond P
Ref : Journal of Bacteriology , 188 :6599 , 2006
PubMedID: 16952952
Gene_locus related to this paper: stram-q0jwm8 , stram-q1rql3 , stram-q1rqp7 , stram-q1rqu8 , stram-q1rqw8 , stram-q1rr14 , stram-q1rr40 , stram-q1rr62 , stram-q1rrc9 , stram-q1rrf2 , stram-Q9KWX3

Title : Genome evolution in yeasts - Dujon_2004_Nature_430_35
Author(s) : Dujon B , Sherman D , Fischer G , Durrens P , Casaregola S , Lafontaine I , De Montigny J , Marck C , Neuveglise C , Talla E , Goffard N , Frangeul L , Aigle M , Anthouard V , Babour A , Barbe V , Barnay S , Blanchin S , Beckerich JM , Beyne E , Bleykasten C , Boisrame A , Boyer J , Cattolico L , Confanioleri F , de Daruvar A , Despons L , Fabre E , Fairhead C , Ferry-Dumazet H , Groppi A , Hantraye F , Hennequin C , Jauniaux N , Joyet P , Kachouri R , Kerrest A , Koszul R , Lemaire M , Lesur I , Ma L , Muller H , Nicaud JM , Nikolski M , Oztas S , Ozier-Kalogeropoulos O , Pellenz S , Potier S , Richard GF , Straub ML , Suleau A , Swennen D , Tekaia F , Wesolowski-Louvel M , Westhof E , Wirth B , Zeniou-Meyer M , Zivanovic I , Bolotin-Fukuhara M , Thierry A , Bouchier C , Caudron B , Scarpelli C , Gaillardin C , Weissenbach J , Wincker P , Souciet JL
Ref : Nature , 430 :35 , 2004
PubMedID: 15229592
Gene_locus related to this paper: canga-apth1 , canga-ppme1 , canga-q6fik7 , canga-q6fiv5 , canga-q6fiw8 , canga-q6fj11 , canga-q6fjh6 , canga-q6fjl0 , canga-q6fjr8 , canga-q6fkj6 , canga-q6fkm9 , canga-q6fku7 , canga-q6fl14 , canga-q6flb5 , canga-q6fle9 , canga-q6flk8 , canga-q6fly1 , canga-q6fly9 , canga-q6fmz4 , canga-q6fnx4 , canga-q6fp28 , canga-q6fpa8 , canga-q6fpi6 , canga-q6fpv7 , canga-q6fpw6 , canga-q6fqj3 , canga-q6fr97 , canga-q6frt7 , canga-q6ftm9 , canga-q6ftu0 , canga-q6ftv9 , canga-q6ftz9 , canga-q6fuf8 , canga-q6fv41 , canga-q6fvu3 , canga-q6fw36 , canga-q6fw94 , canga-q6fwk6 , canga-q6fwm0 , canga-q6fxc7 , canga-q6fxd7 , debha-apth1 , debha-atg15 , debha-b5rtk1 , debha-b5rub4 , debha-b5rue8 , debha-b5rue9 , debha-bna7 , debha-ppme1 , debha-q6bgx3 , debha-q6bh69 , debha-q6bhb8 , debha-q6bhc1 , debha-q6bhd0 , debha-q6bhj7 , debha-q6bi97 , debha-q6biq7 , debha-q6bj53 , debha-q6bkd8 , debha-q6bks1 , debha-q6bky4 , debha-q6bm63 , debha-q6bmh3 , debha-q6bn89 , debha-q6bnj6 , debha-q6bp08 , debha-q6bpb4 , debha-q6bpc0 , debha-q6bpc6 , debha-q6bq10 , debha-q6bq11 , debha-q6bqd9 , debha-q6bqj6 , debha-q6br33 , debha-q6br93 , debha-q6brg1 , debha-q6brw7 , debha-q6bs23 , debha-q6bsc3 , debha-q6bsl8 , debha-q6bsx6 , debha-q6bta5 , debha-q6bty5 , debha-q6btz0 , debha-q6bu73 , debha-q6buk9 , debha-q6but7 , debha-q6bvc4 , debha-q6bvg4 , debha-q6bvg8 , debha-q6bvp4 , debha-q6bw82 , debha-q6bxr7 , debha-q6bxu9 , debha-q6bym5 , debha-q6byn7 , debha-q6bzj8 , debha-q6bzk2 , debha-q6bzm5 , klula-apth1 , klula-ppme1 , klula-q6cin9 , klula-q6ciu6 , klula-q6cj47 , klula-q6cjc8 , klula-q6cjq9 , klula-q6cjs1 , klula-q6cjv9 , klula-q6ckd7 , klula-q6ckk4 , klula-q6ckx4 , klula-q6cl20 , klula-q6clm1 , klula-q6cly8 , klula-q6clz7 , klula-q6cm48 , klula-q6cm49 , klula-q6cmt5 , klula-q6cn71 , klula-q6cnm1 , klula-q6cr74 , klula-q6cr90 , klula-q6crs0 , klula-q6crv8 , klula-q6crz9 , klula-q6cst8 , klula-q6csv8 , klula-q6ctp8 , klula-q6cu02 , klula-q6cu78 , klula-q6cu79 , klula-q6cuv3 , klula-q6cvd3 , klula-q6cw70 , klula-q6cw92 , klula-q6cwu7 , klula-q6cx84 , klula-q6cxa3 , klula-q6cy41 , yarli-apth1 , yarli-atg15 , yarli-BST1B , yarli-lip2 , yarli-LIP3 , yarli-LIP4 , yarli-LIP5 , yarli-LIP7 , yarli-LIP8 , yarli-lipa1 , yarli-ppme1 , yarli-q6bzp1 , yarli-q6bzv7 , yarli-q6c1f5 , yarli-q6c1f7 , yarli-q6c1r3 , yarli-q6c2z2 , yarli-q6c3h1 , yarli-q6c3i6 , yarli-q6c3l1 , yarli-q6c3u6 , yarli-q6c4h8 , yarli-q6c5j1 , yarli-q6c5m4 , yarli-q6c6m4 , yarli-q6c6p7 , yarli-q6c6v2 , yarli-q6c7h3 , yarli-q6c7i7 , yarli-q6c7j5 , yarli-q6c7y6 , yarli-q6c8m4 , yarli-q6c8q4 , yarli-q6c8u4 , yarli-q6c8y2 , yarli-q6c9r0 , yarli-q6c9r1 , yarli-q6c9u0 , yarli-q6c9v4 , yarli-q6c209 , yarli-q6c225 , yarli-q6c493 , yarli-q6c598 , yarli-q6c687 , yarli-q6c822 , yarli-q6cau6 , yarli-q6cax2 , yarli-q6caz1 , yarli-q6cb63 , yarli-q6cba7 , yarli-q6cbb1 , yarli-q6cbe6 , yarli-q6cby1 , yarli-q6ccr0 , yarli-q6cdg1 , yarli-q6cdi6 , yarli-q6cdv9 , yarli-q6ce37 , yarli-q6ceg0 , yarli-q6cep3 , yarli-q6cey5 , yarli-q6cf60 , yarli-q6cfp3 , yarli-q6cfx2 , yarli-q6cg13 , yarli-q6cg27 , yarli-q6cgj3 , yarli-q6chb8 , yarli-q6ci59 , yarli-q6c748 , canga-q6fpj0 , klula-q6cp11 , yarli-q6c4p0 , debha-q6btp5 , debha-kex1

Title : Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome - Dufresne_2003_Proc.Natl.Acad.Sci.U.S.A_100_10020
Author(s) : Dufresne A , Salanoubat M , Partensky F , Artiguenave F , Axmann IM , Barbe V , Duprat S , Galperin MY , Koonin EV , Le Gall F , Makarova KS , Ostrowski M , Oztas S , Robert C , Rogozin IB , Scanlan DJ , Tandeau de Marsac N , Weissenbach J , Wincker P , Wolf YI , Hess WR
Ref : Proc Natl Acad Sci U S A , 100 :10020 , 2003
PubMedID: 12917486
Gene_locus related to this paper: proma-MHPC2 , proma-PRO1109 , proma-q7v9n9 , proma-q7vb48 , proma-q7vb60 , proma-q7vbe1 , proma-q7vbl5 , proma-q7vcg4 , proma-q7vdr9 , proma-q7ved1

Title : An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi - Cohen_2003_Mol.Microbiol_47_1495
Author(s) : Cohen GN , Barbe V , Flament D , Galperin M , Heilig R , Lecompte O , Poch O , Prieur D , Querellou J , Ripp R , Thierry JC , Van der Oost J , Weissenbach J , Zivanovic Y , Forterre P
Ref : Molecular Microbiology , 47 :1495 , 2003
PubMedID: 12622808
Gene_locus related to this paper: pyrab-PAB0762 , pyrab-PAB1050 , pyrab-PAB1300 , pyrab-PAB2176 , pyrab-PYRAB14490

Title : Mechanisms of evolution in Rickettsia conorii and R. prowazekii - Ogata_2001_Science_293_2093
Author(s) : Ogata H , Audic S , Renesto-Audiffren P , Fournier PE , Barbe V , Samson D , Roux V , Cossart P , Weissenbach J , Claverie JM , Raoult D
Ref : Science , 293 :2093 , 2001
PubMedID: 11557893
Gene_locus related to this paper: ricco-PTRB , ricco-RC0464 , ricco-RC0603 , ricco-RC0617 , ricco-RC0713 , ricco-RC1147 , ricco-RC1296 , ricpr-RP681 , ricco-RC1136

Title : The complete genome sequence of the murine respiratory pathogen Mycoplasma pulmonis - Chambaud_2001_Nucleic.Acids.Res_29_2145
Author(s) : Chambaud I , Heilig R , Ferris S , Barbe V , Samson D , Galisson F , Moszer I , Dybvig K , Wroblewski H , Viari A , Rocha EP , Blanchard A
Ref : Nucleic Acids Research , 29 :2145 , 2001
PubMedID: 11353084
Gene_locus related to this paper: mycpu-MYPU.0330 , mycpu-MYPU.0350 , mycpu-MYPU.0360 , mycpu-MYPU.0370 , mycpu-MYPU.0380 , mycpu-MYPU.6950

Title : Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi - Katinka_2001_Nature_414_450
Author(s) : Katinka MD , Duprat S , Cornillot E , Metenier G , Thomarat F , Prensier G , Barbe V , Peyretaillade E , Brottier P , Wincker P , Delbac F , El Alaoui H , Peyret P , Saurin W , Gouy M , Weissenbach J , Vivares CP
Ref : Nature , 414 :450 , 2001
PubMedID: 11719806
Gene_locus related to this paper: enccu-ECU07.0900 , enccu-ECU09.0730 , enccu-q8sut7 , enccu-Q8SVX3