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psefs-c3k813

Pseudomonas fluorescens; Pseudomonas synxantha; Pseudomonas sp. Proline iminopeptidase

Comment

Other strains: Pseudomonas fluorescens (strain SBW25\; WH6\; BRIP34879\; RE*1-1-14\; EGD-AQ6\; SS101\; A506)\; Pseudomonas synxantha BG33R\; Pseudomonas sp. (CFT9\; CF150\; TKP\; FH1\; FH5)

Relationship

Family : Proline_iminopeptidase

Block : X

Position in NCBI Life Tree : Pseudomonas fluorescens

(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)

> cellular organisms N E > Bacteria N E > Proteobacteria N E > Gammaproteobacteria N E > Pseudomonadales N E > Pseudomonadaceae N E > Pseudomonas N E > Pseudomonas fluorescens group N E > Pseudomonas fluorescens N E

Molecular evidence

No mutation

No structure

No kinetic

No disease

No substrate

No inhibitor

Database

Sequence

Peptide

MQTWYPQIKP YARHDLAVDD THTLYVDESG SPEGLPVVFI HGGPGAGCDA QSRCYFDPNL YRIVTFDQRG CGRSTPRASL ENNTTWDLVA DLERIREHLG IDKWVLFGGS WGSTLALAYA QTHPERVHGL IVRGIFLARP QDIEWFYQAG ASRLFPDYWQ DYIAPIPAEE RHDMIAAYHK RLTGNDQIAQ MHAAKAWSGW EGRMLGLCPS PQHVERFSEP QRALSIARIE CHYFTNNSFL EPNQLIRDMH KIAHLPGVII HGRYDMICPL DNAWELHQAW PNSELQVIRE AGHAASEPGI TDALVRATAE MARRLLDLPP EEA

References (7)

Title : Complete Genome Sequence of Pseudomonas sp. Strain TKP, Isolated from a gamma-Hexachlorocyclohexane-Degrading Mixed Culture - Ohtsubo_2014_Genome.Announc_2_e01241
Author(s) : Ohtsubo Y , Kishida K , Sato T , Tabata M , Kawasumi T , Ogura Y , Hayashi T , Tsuda M , Nagata Y
Ref : Genome Announc , 2 : , 2014
Abstract :
PubMedSearch : Ohtsubo_2014_Genome.Announc_2_e01241
PubMedID: 24482516
Gene_locus related to this paper: psefl-e2xn15 , psefs-c3k632 , psefs-laaa , psefs-c3k813 , psefl-e2xkc8 , 9psed-v9qxq1 , 9psed-v9qr47

Title : Complete Genome Sequence of the Sugar Beet Endophyte Pseudomonas poae RE*1-1-14, a Disease-Suppressive Bacterium - Muller_2013_Genome.Announc_1_e0002013
Author(s) : Muller H , Zachow C , Alavi M , Tilcher R , Krempl PM , Thallinger GG , Berg G
Ref : Genome Announc , 1 :e0002013 , 2013
Abstract :
PubMedSearch : Muller_2013_Genome.Announc_1_e0002013
PubMedID: 23516179
Gene_locus related to this paper: psefl-e2xn15 , 9psed-m4k1c1 , psefs-c3k813 , psefl-e2xkc8 , psefl-l7hkx4

Title : Genome Sequences of Pseudomonas spp. Isolated from Cereal Crops - Gardiner_2013_Genome.Announc_1_E00209
Author(s) : Gardiner DM , Stiller J , Covarelli L , Lindeberg M , Shivas RG , Manners JM
Ref : Genome Announc , 1 : , 2013
Abstract :
PubMedSearch : Gardiner_2013_Genome.Announc_1_E00209
PubMedID: 23661484
Gene_locus related to this paper: psefl-e2xn15 , pseu2-q4zwv7 , psesx-f3h3z5 , pseap-f3ivd6 , psefl-l7hmv2 , psefs-c3k813 , psefl-e2xkc8 , psesx-a0a085uxb9 , psefl-l7hkx4

Title : Mycobacterium avium subspecies paratuberculosis is widely distributed in British soils and waters: implications for animal and human health - Rhodes_2013_Environ.Microbiol_15_2761
Author(s) : Rhodes G , Henrys P , Thomson BC , Pickup RW
Ref : Environ Microbiol , 15 :2761 , 2013
Abstract :
PubMedSearch : Rhodes_2013_Environ.Microbiol_15_2761
PubMedID: 23648004
Gene_locus related to this paper: psefs-c3k632 , psefs-c3k813 , psefl-w2f4e5 , psefl-e2xkc8 , 9psed-w2d9t7

Title : Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions - Loper_2012_PLoS.Genet_8_e1002784
Author(s) : Loper JE , Hassan KA , Mavrodi DV , Davis EW, 2nd , Lim CK , Shaffer BT , Elbourne LD , Stockwell VO , Hartney SL , Breakwell K , Henkels MD , Tetu SG , Rangel LI , Kidarsa TA , Wilson NL , van de Mortel JE , Song C , Blumhagen R , Radune D , Hostetler JB , Brinkac LM , Durkin AS , Kluepfel DA , Wechter WP , Anderson AJ , Kim YC , Pierson LS, 3rd , Pierson EA , Lindow SE , Kobayashi DY , Raaijmakers JM , Weller DM , Thomashow LS , Allen AE , Paulsen IT
Ref : PLoS Genet , 8 :e1002784 , 2012
Abstract :
PubMedSearch : Loper_2012_PLoS.Genet_8_e1002784
PubMedID: 22792073
Gene_locus related to this paper: psebn-f2kd12 , psefl-e2xn15 , psefs-c3k632 , psepf-q3k919 , psebn-f2k9f6 , psefl-i2br68 , psefl-i4k4a8 , 9psed-i4l6c7 , 9psed-i4xqw9 , psefl-j2epr2 , 9psed-j2ew12 , psefs-c3k813 , psefl-w2f4e5 , 9psed-s6i647 , 9psed-j2wmk3 , 9psed-i4kt90 , 9psed-a0a068aip7 , 9psed-j2nei8 , 9psed-i4kw69 , psefl-i2bvr1 , psefl-j2mu40 , 9psed-j2ync4

Title : An improved, high-quality draft genome sequence of the Germination-Arrest Factor-producing Pseudomonas fluorescens WH6 - Kimbrel_2010_BMC.Genomics_11_522
Author(s) : Kimbrel JA , Givan SA , Halgren AB , Creason AL , Mills DI , Banowetz GM , Armstrong DJ , Chang JH
Ref : BMC Genomics , 11 :522 , 2010
Abstract :
PubMedSearch : Kimbrel_2010_BMC.Genomics_11_522
PubMedID: 20920191
Gene_locus related to this paper: psef5-q4k458 , psefl-e2xn15 , psefl-e2xsy8 , psefl-e2xvk9 , psefl-e2xz59 , psefs-c3jz63 , psefs-c3k3m8 , psefs-c3k632 , psefs-laaa , psefl-e2xwc2 , psefs-c3k813 , psefl-e2xkc8

Title : Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens - Silby_2009_Genome.Biol_10_R51
Author(s) : Silby MW , Cerdeno-Tarraga AM , Vernikos GS , Giddens SR , Jackson RW , Preston GM , Zhang XX , Moon CD , Gehrig SM , Godfrey SA , Knight CG , Malone JG , Robinson Z , Spiers AJ , Harris S , Challis GL , Yaxley AM , Harris D , Seeger K , Murphy L , Rutter S , Squares R , Quail MA , Saunders E , Mavromatis K , Brettin TS , Bentley SD , Hothersall J , Stephens E , Thomas CM , Parkhill J , Levy SB , Rainey PB , Thomson NR
Ref : Genome Biol , 10 :R51 , 2009
Abstract :
PubMedSearch : Silby_2009_Genome.Biol_10_R51
PubMedID: 19432983
Gene_locus related to this paper: psef5-metx , psefl-este , psefs-c3jz63 , psefs-c3jzq8 , psefs-c3k1v7 , psefs-c3k3d6 , psefs-c3k3m8 , psefs-c3k3s9 , psefs-c3k5q5 , psefs-c3k6c6 , psefs-c3k7v4 , psefs-c3k8m7 , psefs-c3k8y7 , psefs-c3k9z2 , psefs-c3k032 , psefs-c3k320 , psefs-c3k362 , psefs-c3k632 , psefs-c3k927 , psefs-c3kan9 , psefs-c3kbe5 , psefs-c3kdh9 , psefs-c3ke34 , psefs-laaa , psepf-q3k5t9 , psepf-q3k6f3 , psepf-q3k524 , psepf-q3kcu9 , psepf-q3kd07 , psepf-q3kf33 , psepf-q3kh87 , psefs-c3jxp6 , psepf-q3kf85 , psefs-c3k813 , psefs-c3keb8 , psefl-e2xkc8 , psefs-c3k9x6