Gene_Locus Report

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Gene_locus Report for: 9bila-a0a0v0tgw4.1

Trichinella murrelli; T. nelsoni; T. sp., T pseudospiralis T. patagoniensis; T. spiralis (Trichina worm); T britovi; T. zimbabwensi; T nativa; T. papuae, Neuroligin-1

Comment
Other strains: Trichinella murrelli; Trichinella spiralis (Trichina worm); Trichinella nelsoni; Trichinella sp. (T9;T6; T8) Trichinella pseudospiralis (Parasitic roundworm); Trichinella patagoniensis; Trichinella spiralis (Trichina worm); Trichinella britovi; Trichinella zimbabwensi; Trichinella nativa; Trichinella papuae


Relationship
Family|Neuroligin
Block| C
Position in NCBI Life Tree|Trichinella murrelli
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Opisthokonta: N E > Metazoa: N E > Eumetazoa: N E > Bilateria: N E > Protostomia: N E > Ecdysozoa: N E > Nematoda: N E > Enoplea: N E > Dorylaimia: N E > Trichinellida: N E > Trichinellidae: N E > Trichinella: N E > Trichinella murrelli: N E
Warning: This entry is a compilation of different species or line or strain with more than 90% amino acide identity. You can retrieve all strain data


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
>3 Genbank links 14 more: JYDJ01000278, ABIR02000627, JYDL01000163
>3 UniProt links 15 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
>3 UniProt links 33 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
>3 Interpro links 33 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
>3 Pfam links 33 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
>3 PIRSF links 33 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
>3 SUPERFAM links 33 more: A0A0V0TGW4, A0A0V0RIQ1, A0A0V0RIK9
Sequence
Graphical view for this peptide sequence: 9bila-a0a0v0tgw4.1
Colored MSA for Neuroligin (raw)
MSQATVGTTASDKKIVQTSFGKLRGRIVHLHQYGLPSVEQYLGVPYGTSP
TGSRRFMMPQTAAKWTNTIKDATQLPPNCIQLWSNNKALKSHAQGKIKRF
MPMLKNQQEDCLFMNFYIPTSSQTHMNKKFPVLVLIHGNSYNWNAGNLYD
ASVLAAYGEIIVVTLNYRLGVFGFLSAGEPSCKGNWALSDIVCALDVLRA
LIGDFGGDSKAVTLLGWDTGAALVNLLMTSPISAPVDSRLFQRAILLGGS
ALSSWSTVTNPADYFYKFAENVGCPTYKTSPFTQKQAPVPTDVILECMRG
ESVENITRAASLLDAPTFLSNFGPVVDGIVVNTDPAYNLEHHGTLFQEID
LLVGMTKHEAYEQLPTDKLQFGLDVNSRDAIYRTLVRNRYEFHRTEIFNA
IKSEYNDWYNPGMHPITLRDSVLEALSDALYLAPATKVTRLHARGKTPGN
MQTGHKDGSKRGSTYFYLFSHGTSGRPRFGLRESVHNEDLPYILGQPLLN
NQQQSLTEYSPFDFTFNKQERVLSEVIMRYIANFVKTGNPNEVQWKRMLT
DDVKFLEKFKNTYWPEFYTDSKENYFEIKAEPKVDSFYRAHEVAFWDNFL
PSLEENGKSESNPEHHLLPRHFEKSSYFGIVKPYGSSVKIPFPPPPLPPT
PMPKELTTLLQHQRALQGTPQPNLVSDQSSLNTGAPNASLSTNYSTILSV
TIAVGCALLILNLLIFAGIYRQREKQKRAKRQENTSLLMQETSPYDLAGS
YGGLVTPVNSGALSRDQGSTAYGVSSVAMNPTNASPVNSPPFRDGDLYAY
SRPFQHSQQTPTNTQAYATSGSHQLIVPNEEESLLNPQIQHAQQPIISPL
CPRHGKAAAAAAAAAAAAAA
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MSQATVGTTASDKKIVQTSFGKLRGRIVHLHQYGLPSVEQYLGVPYGTSP
TGSRRFMMPQTAAKWTNTIKDATQLPPNCIQLWSNNKALKSHAQGKIKRF
MPMLKNQQEDCLFMNFYIPTSSQTHMNKKFPVLVLIHGNSYNWNAGNLYD
ASVLAAYGEIIVVTLNYRLGVFGFLSAGEPSCKGNWALSDIVCALDVLRA
LIGDFGGDSKAVTLLGWDTGAALVNLLMTSPISAPVDSRLFQRAILLGGS
ALSSWSTVTNPADYFYKFAENVGCPTYKTSPFTQKQAPVPTDVILECMRG
ESVENITRAASLLDAPTFLSNFGPVVDGIVVNTDPAYNLEHHGTLFQEID
LLVGMTKHEAYEQLPTDKLQFGLDVNSRDAIYRTLVRNRYEFHRTEIFNA
IKSEYNDWYNPGMHPITLRDSVLEALSDALYLAPATKVTRLHARGKTPGN
MQTGHKDGSKRGSTYFYLFSHGTSGRPRFGLRESVHNEDLPYILGQPLLN
NQQQSLTEYSPFDFTFNKQERVLSEVIMRYIANFVKTGNPNEVQWKRMLT
DDVKFLEKFKNTYWPEFYTDSKENYFEIKAEPKVDSFYRAHEVAFWDNFL
PSLEENGKSESNPEHHLLPRHFEKSSYFGIVKPYGSSVKIPFPPPPLPPT
PMPKELTTLLQHQRALQGTPQPNLVSDQSSLNTGAPNASLSTNYSTILSV
TIAVGCALLILNLLIFAGIYRQREKQKRAKRQENTSLLMQETSPYDLAGS
YGGLVTPVNSGALSRDQGSTAYGVSSVAMNPTNASPVNSPPFRDGDLYAY
SRPFQHSQQTPTNTQAYATSGSHQLIVPNEEESLLNPQIQHAQQPIISPL
CPRHGKAAAAAAAAAAAAAA


Reference
    Title: The draft genome of the parasitic nematode Trichinella spiralis
    Mitreva M, Jasmer DP, Zarlenga DS, Wang Z, Abubucker S, Martin J, Taylor CM, Yin Y, Fulton L and Wilson RK <11 more author(s)>
    Ref: Nat Genet, 43:228, 2011 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
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