Gene_Locus Report

Biblio print

Add to basket

Go to basket

Tree Display

AceDB Schema

XML Display

Feedback

Gene_locus Report for: arath-At5g14310

Arabidopsis thaliana (Mouse-ear cress) AtCXE16 At5g14310 F18O22_100 hypothetical 48.6 kda protein

Relationship
Family|Plant_carboxylesterase
Block| H
Position in NCBI Life Tree|Arabidopsis thaliana
(Below N is a link to NCBI taxonomic web page and E link to ESTHER at designed phylum.)
> cellular organisms: N E > Eukaryota: N E > Viridiplantae: N E > Streptophyta: N E > Streptophytina: N E > Embryophyta: N E > Tracheophyta: N E > Euphyllophyta: N E > Spermatophyta: N E > Magnoliophyta: N E > Mesangiospermae: N E > eudicotyledons: N E > Gunneridae: N E > Pentapetalae: N E > rosids: N E > malvids: N E > Brassicales: N E > Brassicaceae: N E > Camelineae: N E > Arabidopsis: N E > Arabidopsis thaliana: N E


Molecular evidence
Database
No mutation
No structure
No kinetic





No Substrate
No inhibitor
2 Genbank : AL163817, AY085477
1 UniProt : Q8LED9
1 Interpro : Q8LED9
1 Prodom : Q8LED9
1 Pfam : Q8LED9
1 PIRSF : Q8LED9
1 SUPERFAM : Q8LED9
1 Tair database : At5g14310
Sequence
Graphical view for this peptide sequence: arath-At5g14310
Colored MSA for Plant_carboxylesterase (raw)
MPGVAVKLYSVFFKLLLKHRLQNLISISAADGLSDSFGVSTRSDESVAAA
NPSFTDGVATKDIHIDPMTSLTVRIFLPESALSPEPDSLRHKDNYNHQPR
SDRRHSYGPNHNSPAPAERNESRRNSYGCNNENLEPYGGYAPSAKRNSRK
LPVMLQFHGGGWVSGSSDSAANDFFCRRIAKVCDVIVLAVGYRLAPENRY
PAAFEDGVKVLHWLGKQANLADCCKSLGNRRVNGVEVKKLNVQGQIVDAF
GASMVEPWLAAHADPSRCVLLGVSCGGNIADYVARKAVEAGKLLEPVKVV
AQVLMYPFFIGNNPTQSEIKLANSYFYDKPVSVLAWKLFLPEKEFDFDHP
AANPLAHNRSGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDSPV
LEYKDAVHEFATLDMLLKTPQAQACAEDIAIWVKKYISLRGHEFSY
Legend This sequence has been compared to family alignement (MSA)
red => minority aminoacid
blue => majority aminoacid
color intensity => conservation rate
title => sequence position(MSA position)aminoacid rate
Catalytic site
Catalytic site in the MSA

MPGVAVKLYSVFFKLLLKHRLQNLISISAADGLSDSFGVSTRSDESVAAA
NPSFTDGVATKDIHIDPMTSLTVRIFLPESALSPEPDSLRHKDNYNHQPR
SDRRHSYGPNHNSPAPAERNESRRNSYGCNNENLEPYGGYAPSAKRNSRK
LPVMLQFHGGGWVSGSSDSAANDFFCRRIAKVCDVIVLAVGYRLAPENRY
PAAFEDGVKVLHWLGKQANLADCCKSLGNRRVNGVEVKKLNVQGQIVDAF
GASMVEPWLAAHADPSRCVLLGVSCGGNIADYVARKAVEAGKLLEPVKVV
AQVLMYPFFIGNNPTQSEIKLANSYFYDKPVSVLAWKLFLPEKEFDFDHP
AANPLAHNRSGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDSPV
LEYKDAVHEFATLDMLLKTPQAQACAEDIAIWVKKYISLRGHEFSY


References
    Title: The carboxylesterase gene family from Arabidopsis thaliana
    Marshall SD, Putterill JJ, Plummer KM, Newcomb RD
    Ref: Journal of Molecular Evolution, 57:487, 2003 : PubMed

            

    Title: Structural analysis of Arabidopsis thaliana chromosome 5. VIII. Sequence features of the regions of 1,081,958 bp covered by seventeen physically assigned P1 and TAC clones.
    Asamizu E, Sato S, Kaneko T, Nakamura Y, Kotani H, Miyajima N, Tabata S
    Ref: DNA Research, 5:379, 1998 : PubMed

            


Other Papers


Send your questions or comments to :
Mail to: Nicolas Lenfant, Thierry Hotelier, Yves Bourne, Pascale Marchot and Arnaud Chatonnet.
Please cite: Lenfant 2013 Nucleic.Acids.Res. or Marchot Chatonnet 2012 Prot.Pept Lett.
For technical information about these pages see:
ESTHER Home Page and ACEDB Home Page
AcePerl Lincoln Stein Home Page
webmaster

Acknowledgements and disclaimer